miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01960;SSU_rRNA_eukarya;L16007.1/1-1258 16911:Curtisia dentata
Length = 1258
Score = 65.9 bits (33), Expect = 9e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||||||
Sbjct: 286 taggggcctaccatggtggtgacgggtgacgga 318
>RF01960;SSU_rRNA_eukarya;AK242818.1/1-1489 39947:Oryza sativa
Japonica Group
Length = 1489
Score = 65.9 bits (33), Expect = 9e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||||||
Sbjct: 56 taggggcctaccatggtggtgacgggtgacgga 88
>RF01960;SSU_rRNA_eukarya;AACV01001730.1/834-2089 39947:Oryza sativa
Japonica Group
Length = 1256
Score = 65.9 bits (33), Expect = 9e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||||||
Sbjct: 336 taggggcctaccatggtggtgacgggtgacgga 368
>RF01960;SSU_rRNA_eukarya;AF135205.1/1-1711 78726:Cleistes
divaricata
Length = 1711
Score = 65.9 bits (33), Expect = 9e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||||||
Sbjct: 290 taggggcctaccatggtggtgacgggtgacgga 322
>RF01960;SSU_rRNA_eukarya;FJ425742.1/1-1704 112170:Cyrtosia
septentrionalis
Length = 1704
Score = 65.9 bits (33), Expect = 9e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||||||
Sbjct: 293 taggggcctaccatggtggtgacgggtgacgga 325
>RF01960;SSU_rRNA_eukarya;AF168869.1/1-1743 4477:Pistia stratiotes
(water lettuce)
Length = 1743
Score = 65.9 bits (33), Expect = 9e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||||||
Sbjct: 314 taggggcctaccatggtggtgacgggtgacgga 346
>RF01960;SSU_rRNA_eukarya;X66689.1/1-1303 20686:Indigofera
gerardiana
Length = 1303
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 4 gggcctaccatggtggtgacgggtgacgga 33
||||||||||||||||||||||||||||||
Sbjct: 339 gggcctaccatggtggtgacgggtgacgga 368
>RF01960;SSU_rRNA_eukarya;L24047.1/1-1767 29816:Prosopanche
americana
Length = 1767
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 339 ggcctaccatggtggtgacgggtgacgga 367
>RF01960;SSU_rRNA_eukarya;AARH01025907.1/1-1659 3694:Populus
trichocarpa
Length = 1659
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 245 ggcctaccatggtggtgacgggtgacgga 273
>RF01960;SSU_rRNA_eukarya;AARH01032844.1/1-1379 3694:Populus
trichocarpa
Length = 1379
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 173 ggcctaccatggtggtgacgggtgacgga 201
>RF01960;SSU_rRNA_eukarya;AY674605.1/1-1728 72458:Hugonia
platysepala
Length = 1728
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 321 ggcctaccatggtggtgacgggtgacgga 349
>RF01960;SSU_rRNA_eukarya;EF023591.1/1-1771 404790:Phaseoleae
environmental sample
Length = 1771
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 321 ggcctaccatggtggtgacgggtgacgga 349
>RF01960;SSU_rRNA_eukarya;AP009726.1/46773-45096 34305:Lotus
japonicus
Length = 1678
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 340 ggcctaccatggtggtgacgggtgacgga 368
>RF01960;SSU_rRNA_eukarya;L25682.1/1-1762 50128:Helosis cayennensis
Length = 1762
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 339 ggcctaccatggtggtgacgggtgacgga 367
>RF01960;SSU_rRNA_eukarya;EF023163.1/1-1788 404788:Caryophyllaceae
environmental sample
Length = 1788
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 337 ggcctaccatggtggtgacgggtgacgga 365
>RF01960;SSU_rRNA_eukarya;X66775.1/1-1301 16965:Isopogon latifolius
Length = 1301
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 340 ggcctaccatggtggtgacgggtgacgga 368
>RF01960;SSU_rRNA_eukarya;AF309394.1/1-1721 167602:Trichopus
zeylanicus
Length = 1721
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||| ||||||||||||||
Sbjct: 285 taggggcctaccatggtgttgacgggtgacgga 317
>RF01960;SSU_rRNA_eukarya;AF309405.1/1-1764 167577:Geomitra
clavigera
Length = 1764
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 289 ggcctaccatggtggtgacgggtgacgga 317
>RF01960;SSU_rRNA_eukarya;EU420990.1/1-1783 396647:Afrothismia hydra
Length = 1783
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 323 ggcctaccatggtggtgacgggtgacgga 351
>RF01960;SSU_rRNA_eukarya;AF135197.1/1-1724 112168:Rhizanthella
gardneri
Length = 1724
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
||||||||||||||||| |||||||||||||||
Sbjct: 293 taggggcctaccatggtagtgacgggtgacgga 325
>RF01960;SSU_rRNA_eukarya;U87302.1/1-1695 56897:Afrocarpus falcatus
Length = 1695
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 312 ggcctaccatggtggtgacgggtgacgga 340
>RF01960;SSU_rRNA_eukarya;EU273296.1/1-1654 329090:Cupressus
tonkinensis
Length = 1654
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 262 ggcctaccatggtggtgacgggtgacgga 290
>RF01960;SSU_rRNA_eukarya;AB470468.1/1-1773 575411:Prototheca sp.
asahi57
Length = 1773
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 316 ggcctaccatggtggtgacgggtgacgga 344
>RF01960;SSU_rRNA_eukarya;AB183196.1/1-1792 215448:Prototheca
stagnora
Length = 1792
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 314 ggcctaccatggtggtgacgggtgacgga 342
>RF01960;SSU_rRNA_eukarya;D86499.1/1-1751 51320:Chaetophora
incrassata
Length = 1751
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 317 ggcctaccatggtggtgacgggtgacgga 345
>RF01960;SSU_rRNA_eukarya;EF023176.1/1-1821 417965:uncultured
Rhynchomesostominae sp.
Length = 1821
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 337 ggcctaccatggtggtgacgggtgacgga 365
>RF01960;SSU_rRNA_eukarya;AY854221.1/1-1415 319951:Monoposthia
costata
Length = 1415
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
||||||||||||||||||||||||| |||||||
Sbjct: 304 taggggcctaccatggtggtgacggatgacgga 336
>RF01960;SSU_rRNA_eukarya;AY903713.1/1-1568 260090:uncultured
glomeraceous AM fungus
Length = 1568
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 195 ggcctaccatggtggtgacgggtgacgga 223
>RF01960;SSU_rRNA_eukarya;AY903716.1/1-1576 260090:uncultured
glomeraceous AM fungus
Length = 1576
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 194 ggcctaccatggtggtgacgggtgacgga 222
>RF01960;SSU_rRNA_eukarya;EF109816.1/1-1516 231055:uncultured Glomus
Length = 1516
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 194 ggcctaccatggtggtgacgggtgacgga 222
>RF01960;SSU_rRNA_eukarya;DQ354565.2/1-1750 203904:Hemileia
vastatrix
Length = 1750
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 314 ggcctaccatggtggtgacgggtgacgga 342
>RF01960;SSU_rRNA_eukarya;EF024283.1/1-1783 282495:Oxytrichidae
environmental sample
Length = 1783
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||||
Sbjct: 354 ggcctaccatggtggtgacgggtgacgga 382
>RF01960;SSU_rRNA_eukarya;AARH01014565.1/4236-5979 3694:Populus
trichocarpa
Length = 1744
Score = 56.0 bits (28), Expect = 9e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
||||||||||||||||||||||||||||
Sbjct: 340 ggcctaccatggtggtgacgggtgacgg 367
>RF01960;SSU_rRNA_eukarya;AF313577.1/1-1714 37427:Isoetes
engelmannii (Engelmann's quillwort)
Length = 1714
Score = 56.0 bits (28), Expect = 9e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
||||||||||||||||||||||||||||
Sbjct: 300 ggcctaccatggtggtgacgggtgacgg 327
>RF01960;SSU_rRNA_eukarya;AARH01029942.1/1615-1 3694:Populus
trichocarpa
Length = 1615
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 7 cctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||||||||
Sbjct: 290 cctaccatggtggtgacgggtgacgga 316
>RF01960;SSU_rRNA_eukarya;AY665046.1/1-1761 100272:uncultured
eukaryote
Length = 1761
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 gggcctaccatggtggtgacgggtgacgga 33
||||||||||||| ||||||||||||||||
Sbjct: 311 gggcctaccatggcggtgacgggtgacgga 340
>RF01960;SSU_rRNA_eukarya;AASG02003088.1/19512-21232 3988:Ricinus
communis (castor bean)
Length = 1721
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgac 30
||||||||||||||||||||||||||
Sbjct: 340 ggcctaccatggtggtgacgggtgac 365
>RF01960;SSU_rRNA_eukarya;AF153445.1/1-1499 96044:Bufo regularis gut
clone FMA-1999
Length = 1499
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacggaa 34
||||||| ||||||||||||||||||||||
Sbjct: 344 ggcctactatggtggtgacgggtgacggaa 373
>RF01960;SSU_rRNA_eukarya;L15197.1/1-1254 23131:Pittosporum
undulatum
Length = 1254
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 gggcctaccatggtggtgacgggtgacgga 33
|||||||| |||||||||||||||||||||
Sbjct: 289 gggcctactatggtggtgacgggtgacgga 318
>RF01960;SSU_rRNA_eukarya;DQ790118.1/1-1667 169260:Olax benthamiana
Length = 1667
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 gggcctaccatggtggtgacgggtgacgga 33
||||||||| ||||||||||||||||||||
Sbjct: 279 gggcctaccgtggtggtgacgggtgacgga 308
>RF01960;SSU_rRNA_eukarya;AB246698.1/1-1711 366608:Stylodictya sp.
8037
Length = 1711
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 gggcctaccatggtggtgacgggtgacgga 33
||||||||||||| ||||||||||||||||
Sbjct: 248 gggcctaccatggcggtgacgggtgacgga 277
>RF01960;SSU_rRNA_eukarya;AB193605.1/1-1723 299204:Didymocyrtis
tetrathalamus
Length = 1723
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 gggcctaccatggtggtgacgggtgacgga 33
||||||||||||| ||||||||||||||||
Sbjct: 250 gggcctaccatggcggtgacgggtgacgga 279
>RF01960;SSU_rRNA_eukarya;EF100340.1/2-1420 100272:uncultured
eukaryote
Length = 1419
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 336 ggcctaccatggtggtaacgggtgacgga 364
>RF01960;SSU_rRNA_eukarya;EF591004.1/1-1735 100272:uncultured
eukaryote
Length = 1735
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 328 ggcctaccatggtggtaacgggtgacgga 356
>RF01960;SSU_rRNA_eukarya;AJ402359.1/1-1781 121274:eukaryote clone
OLI11345
Length = 1781
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 329 ggcctaccatggtggtaacgggtgacgga 357
>RF01960;SSU_rRNA_eukarya;FJ790651.1/1-1753 100272:uncultured
eukaryote
Length = 1753
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 330 ggcctaccatggtggtaacgggtgacgga 358
>RF01960;SSU_rRNA_eukarya;AB275079.1/1-1752 100272:uncultured
eukaryote
Length = 1752
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 225 ggcctaccatggtggtaacgggtgacgga 253
>RF01960;SSU_rRNA_eukarya;EU446393.1/1-1536 203449:uncultured marine
eukaryote
Length = 1536
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 280 ggcctaccatggtggtaacgggtgacgga 308
>RF01960;SSU_rRNA_eukarya;EF527074.1/2-1381 203449:uncultured marine
eukaryote
Length = 1380
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 361 ggcctaccatggtgttgacgggtgacgga 389
>RF01960;SSU_rRNA_eukarya;EF527099.1/2-1393 203449:uncultured marine
eukaryote
Length = 1392
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 367 ggcctaccatggtgttgacgggtgacgga 395
>RF01960;SSU_rRNA_eukarya;AY180019.1/1-1730 100272:uncultured
eukaryote
Length = 1730
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 256 ggcctaccatggtggtaacgggtgacgga 284
>RF01960;SSU_rRNA_eukarya;AB275083.1/1-1702 100272:uncultured
eukaryote
Length = 1702
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 272 ggcctaccatggtggtaacgggtgacgga 300
>RF01960;SSU_rRNA_eukarya;EF023465.1/1-1787 404779:uncultured
Desmidiaceae
Length = 1787
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 334 ggcctaccatggtggtaacgggtgacgga 362
>RF01960;SSU_rRNA_eukarya;AJ428086.1/1-1758 102166:Closterium
littorale
Length = 1758
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 323 ggcctaccatggtggtaacgggtgacgga 351
>RF01960;SSU_rRNA_eukarya;AJ250109.1/1-1782 41882:Mesostigma viride
Length = 1782
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 317 ggcctaccatggtggtaacgggtgacgga 345
>RF01960;SSU_rRNA_eukarya;AF408241.1/151-2025 184584:Klebsormidium
subtilissimum
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 138 ggcctaccatggtggtaacgggtgacgga 166
>RF01960;SSU_rRNA_eukarya;DQ490917.1/1-1553 300218:Chimonanthus
nitens
Length = 1553
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
||||||| |||||||||||||||||||||
Sbjct: 164 ggcctactatggtggtgacgggtgacgga 192
>RF01960;SSU_rRNA_eukarya;AC004708.1/14308-16115 3702:Arabidopsis
thaliana (thale cress)
Length = 1808
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 340 ggcctaccatggtggtaacgggtgacgga 368
>RF01960;SSU_rRNA_eukarya;AC004708.1/3892-5657 3702:Arabidopsis
thaliana (thale cress)
Length = 1766
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 340 ggcctaccatggtggtaacgggtgacgga 368
>RF01960;SSU_rRNA_eukarya;AC216772.1/94507-96245 3694:Populus
trichocarpa
Length = 1739
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtga 29
|||||||||||||||||||||||||
Sbjct: 341 ggcctaccatggtggtgacgggtga 365
>RF01960;SSU_rRNA_eukarya;AASG02000092.1/13542-15297 3988:Ricinus
communis (castor bean)
Length = 1756
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtga 29
|||||||||||||||||||||||||
Sbjct: 340 ggcctaccatggtggtgacgggtga 364
>RF01960;SSU_rRNA_eukarya;EF023232.1/1-1791 404790:Phaseoleae
environmental sample
Length = 1791
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
||||||| |||||||||||||||||||||
Sbjct: 337 ggcctactatggtggtgacgggtgacgga 365
>RF01960;SSU_rRNA_eukarya;EF023952.1/1-1812 417444:Caprifoliaceae
environmental sample
Length = 1812
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
||||||| |||||||||||||||||||||
Sbjct: 337 ggcctactatggtggtgacgggtgacgga 365
>RF01960;SSU_rRNA_eukarya;ABXC01003371.1/254185-252659 4558:Sorghum
bicolor (sorghum)
Length = 1527
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtga 29
||||||||||| |||||||||||||||||
Sbjct: 336 taggggcctacgatggtggtgacgggtga 364
>RF01960;SSU_rRNA_eukarya;DQ786081.1/1-1825 396677:Thismia
panamensis
Length = 1825
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
||||||||||||||||| ||||||||||||||
Sbjct: 301 taggggcctaccatggttatgacgggtgacgga 333
>RF01960;SSU_rRNA_eukarya;AF309401.1/1-1717 167578:Burmannia
lutescens
Length = 1717
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| |||||||||| |||||
Sbjct: 265 taggggcctaccatggcggtgacgggtaacgga 297
>RF01960;SSU_rRNA_eukarya;DQ786075.1/1-1370 396659:Burmannia pusilla
Length = 1370
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
||||||||||||||||| ||||||||| |||||
Sbjct: 306 taggggcctaccatggtagtgacgggtaacgga 338
>RF01960;SSU_rRNA_eukarya;AF051795.1/1-1747 60854:Agathis robusta
Length = 1747
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||| ||||||||||||||||||
Sbjct: 304 ggcctaccatcgtggtgacgggtgacgga 332
>RF01960;SSU_rRNA_eukarya;U18525.1/1-1741 37402:Symphyogyna sp.
Length = 1741
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 310 ggcctaccatggtggtaacgggtgacgga 338
>RF01960;SSU_rRNA_eukarya;AF223025.1/3-1753 130307:Archidium
donnellii
Length = 1751
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 298 ggcctaccatggtggtaacgggtgacgga 326
>RF01960;SSU_rRNA_eukarya;AF223032.1/1-1732 61582:Zygodon
intermedius
Length = 1732
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 298 ggcctaccatggtggtaacgggtgacgga 326
>RF01960;SSU_rRNA_eukarya;AF025291.1/1-1681 61563:Orthotrichum
lyellii
Length = 1681
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 277 ggcctaccatggtggtaacgggtgacgga 305
>RF01960;SSU_rRNA_eukarya;AF126292.1/1-1781 81810:Notothylas
breutelii
Length = 1781
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 310 ggcctaccatggtggtaacgggtgacgga 338
>RF01960;SSU_rRNA_eukarya;AF113506.1/1-1729 96477:Chaetosphaeridium
globosum
Length = 1729
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 296 ggcctaccatggtggtaacgggtgacgga 324
>RF01960;SSU_rRNA_eukarya;AF032741.1/1-1737 69342:Chara longifolia
Length = 1737
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 307 ggcctaccatggtggtaacgggtgacgga 335
>RF01960;SSU_rRNA_eukarya;AB257659.1/2-1778 171245:uncultured
Chlorophyta
Length = 1777
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 335 ggcctaccatggtggtaacgggtgacgga 363
>RF01960;SSU_rRNA_eukarya;U18520.1/1-1697 33092:Koliella longiseta
Length = 1697
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 302 ggcctaccatggtggtaacgggtgacgga 330
>RF01960;SSU_rRNA_eukarya;FM205840.1/223-2097 247500:Didymogenes
palatina
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 93 ggcctaccatggtggtaacgggtgacgga 121
>RF01960;SSU_rRNA_eukarya;AF228688.1/1-1774 120748:Oocystis
marssonii
Length = 1774
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 323 ggcctaccatggtggtaacgggtgacgga 351
>RF01960;SSU_rRNA_eukarya;EU439263.1/1-1807 167646:Prototheca zopfii
var. hydrocarbonea
Length = 1807
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||| ||||||||||||||||||||
Sbjct: 342 ggcctaccgtggtggtgacgggtgacgga 370
>RF01960;SSU_rRNA_eukarya;AB437244.1/207-2081 532145:Chlorella sp.
SW1-ZK
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 130 ggcctaccatggtggtaacgggtgacgga 158
>RF01960;SSU_rRNA_eukarya;AY195964.1/251-2125 221618:Chlorella sp.
AN 1-3
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 85 ggcctaccatggtggtaacgggtgacgga 113
>RF01960;SSU_rRNA_eukarya;AB191205.1/1-1580 3077:Chlorella vulgaris
Length = 1580
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 330 ggcctaccatggtggtaacgggtgacgga 358
>RF01960;SSU_rRNA_eukarya;DQ057341.1/1-1375 310507:Chlorella sp.
NC64A
Length = 1375
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 315 ggcctaccatggtggtaacgggtgacgga 343
>RF01960;SSU_rRNA_eukarya;AB162917.1/1-1714 264444:Chlorella sp.
Bnd1-ZK
Length = 1714
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 336 ggcctaccatggtggtaacgggtgacgga 364
>RF01960;SSU_rRNA_eukarya;AB214975.1/1-1756 330890:Nephroselmis sp.
MBIC11149
Length = 1756
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 315 ggcctaccatggtggtaacgggtgacgga 343
>RF01960;SSU_rRNA_eukarya;FJ493496.1/1-1658 141716:Monomastix sp.
OKE-1
Length = 1658
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 265 ggcctaccatggtggtaacgggtgacgga 293
>RF01960;SSU_rRNA_eukarya;AF509628.1/1-1806 195967:Crustomastix
stigmatica
Length = 1806
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 314 ggcctaccatggtggtaacgggtgacgga 342
>RF01960;SSU_rRNA_eukarya;FJ559378.1/1-1653 3165:Tetraselmis striata
Length = 1653
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 242 ggcctaccatggtggtaacgggtgacgga 270
>RF01960;SSU_rRNA_eukarya;EF432532.1/1-1671 429241:prasinophyte sp.
RS-11
Length = 1671
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 204 ggcctaccatggtggtaacgggtgacgga 232
>RF01960;SSU_rRNA_eukarya;AY425321.1/1-1750 252310:prasinophyte sp.
RCC391
Length = 1750
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 316 ggcctaccatggtggtaacgggtgacgga 344
>RF01960;SSU_rRNA_eukarya;AF387152.1/1-1681 163310:Geminella
terricola
Length = 1681
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 287 ggcctaccatggtggtaacgggtgacgga 315
>RF01960;SSU_rRNA_eukarya;AF516676.1/184-2058 209073:Bracteacoccus
sp. BC2-1
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 146 ggcctaccatggtggtaacgggtgacgga 174
>RF01960;SSU_rRNA_eukarya;AF277650.1/273-2147 132188:Schroederia
setigera
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 26 ggcctaccatggtggtaacgggtgacgga 54
>RF01960;SSU_rRNA_eukarya;AF302769.1/1-1764 164532:Ankyra lanceolata
Length = 1764
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 317 ggcctaccatggtggtaacgggtgacgga 345
>RF01960;SSU_rRNA_eukarya;AF169628.1/793-2224 118073:Selenastrum
capricornutum
Length = 1432
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 334 ggcctaccatggtggtaacgggtgacgga 362
>RF01960;SSU_rRNA_eukarya;X56100.1/313-2186 3109:Ankistrodesmus
stipitatus
Length = 1874
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 22 ggcctaccatggtggtaacgggtgacgga 50
>RF01960;SSU_rRNA_eukarya;EF024299.1/1-1788 209477:uncultured
Scenedesmaceae
Length = 1788
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 334 ggcctaccatggtggtaacgggtgacgga 362
>RF01960;SSU_rRNA_eukarya;AY170312.1/309-2072 119582:Scenedesmus
arcuatus var. platydiscus
Length = 1764
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 321 ggcctaccatggtggtaacgggtgacgga 349
>RF01960;SSU_rRNA_eukarya;AF388380.1/295-2169 183310:Coelastrum
astroideum
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 30 ggcctaccatggtggtaacgggtgacgga 58
>RF01960;SSU_rRNA_eukarya;AY044650.1/45-1918 170400:Radiococcus
polycoccus
Length = 1874
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 135 ggcctaccatggtggtaacgggtgacgga 163
>RF01960;SSU_rRNA_eukarya;DQ078298.1/2-1736 337949:Oedocladium
prescottii
Length = 1735
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 336 ggcctaccatggtggtaacgggtgacgga 364
>RF01960;SSU_rRNA_eukarya;AB488566.1/1-1586 619266:Mychonastes sp.
NIES-2339
Length = 1586
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 196 ggcctaccatggtggtaacgggtgacgga 224
>RF01960;SSU_rRNA_eukarya;AJ431570.1/1-1774 187456:Elakatothrix
obtusata
Length = 1774
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 328 ggcctaccatggtggtaacgggtgacgga 356
>RF01960;SSU_rRNA_eukarya;U73471.1/1-1756 52679:Cylindrocapsa
geminella
Length = 1756
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 296 ggcctaccatggtggttacgggtgacgga 324
>RF01960;SSU_rRNA_eukarya;AB218698.1/1-1757 332220:Neochlorosarcina
minuta
Length = 1757
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 310 ggcctaccatggtggtaacgggtgacgga 338
>RF01960;SSU_rRNA_eukarya;EF024567.1/1-1783 373119:uncultured
Dunaliellaceae
Length = 1783
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 329 ggcctaccatggtggtaacgggtgacgga 357
>RF01960;SSU_rRNA_eukarya;EU583803.1/269-2143 592976:Dunaliella
sp. ABRIINW G1/1
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 17 ggcctaccatggtggtaacgggtgacgga 45
>RF01960;SSU_rRNA_eukarya;EU616729.1/243-2117 517010:Dunaliella
sp. ABRIINW G2/1
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 48 ggcctaccatggtggtaacgggtgacgga 76
>RF01960;SSU_rRNA_eukarya;DQ324011.1/208-2082 362583:Dunaliella sp.
SPMO 200-8
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 78 ggcctaccatggtggtaacgggtgacgga 106
>RF01960;SSU_rRNA_eukarya;DQ324019.1/200-2074 362592:Dunaliella sp.
SPMO 300-5
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 86 ggcctaccatggtggtaacgggtgacgga 114
>RF01960;SSU_rRNA_eukarya;AF150905.1/298-2172 3045:Dunaliella
bardawil
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 16 ggcctaccatggtggtaacgggtgacgga 44
>RF01960;SSU_rRNA_eukarya;DQ324012.1/206-2080 362585:Dunaliella sp.
SPMO 201-5
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 79 ggcctaccatggtggtaacgggtgacgga 107
>RF01960;SSU_rRNA_eukarya;M84320.1/309-2182 3046:Dunaliella salina
Length = 1874
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 22 ggcctaccatggtggtaacgggtgacgga 50
>RF01960;SSU_rRNA_eukarya;M62998.1/296-2170 3048:Dunaliella parva
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 35 ggcctaccatggtggtaacgggtgacgga 63
>RF01960;SSU_rRNA_eukarya;DQ324001.1/1-1642 362572:Dunaliella sp.
BSF1
Length = 1642
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 285 ggcctaccatggtggtaacgggtgacgga 313
>RF01960;SSU_rRNA_eukarya;EF473739.1/254-2128 3046:Dunaliella
salina
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 60 ggcctaccatggtggtaacgggtgacgga 88
>RF01960;SSU_rRNA_eukarya;EF473745.1/277-2151 3046:Dunaliella
salina
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 37 ggcctaccatggtggtaacgggtgacgga 65
>RF01960;SSU_rRNA_eukarya;D86497.1/1-1790 51329:Polytomella parva
Length = 1790
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 328 ggcctaccatggtggtaacgggtgacgga 356
>RF01960;SSU_rRNA_eukarya;AF514405.1/2-1267 209400:Chlamydomonas
pseudopulsatilla
Length = 1266
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 311 ggcctaccatggtggtaacgggtgacgga 339
>RF01960;SSU_rRNA_eukarya;DQ009755.1/1-1687 327071:Chlamydomonas sp.
CCMP236
Length = 1687
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 285 ggcctaccatggtggtaacgggtgacgga 313
>RF01960;SSU_rRNA_eukarya;AY220561.1/209-2083 225494:chlamydomonad
sp. BogD9/21T-7d
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 80 ggcctaccatggtggtaacgggtgacgga 108
>RF01960;SSU_rRNA_eukarya;AY220089.1/1-1779 225415:chlamydomonad sp.
NDem 9/21 T-14w
Length = 1779
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 317 ggcctaccatggtggtaacgggtgacgga 345
>RF01960;SSU_rRNA_eukarya;AY220572.1/1-1690 225505:chlamydomonad sp.
NDem9/21T-11d
Length = 1690
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 287 ggcctaccatggtggtaacgggtgacgga 315
>RF01960;SSU_rRNA_eukarya;AY220563.1/335-2094 225496:chlamydomonad
sp. NDem2/24P-3d
Length = 1760
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 302 ggcctaccatggtggtaacgggtgacgga 330
>RF01960;SSU_rRNA_eukarya;AF203398.1/1-1747
110680:coccoid/flagellate chlorophycean CCMP1189
Length = 1747
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 317 ggcctaccatggtggtaacgggtgacgga 345
>RF01960;SSU_rRNA_eukarya;U40921.1/1-1770 44458:coccoid chlorophyte
sp. CCMP1205
Length = 1770
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 315 ggcctaccatggtggtaacgggtgacgga 343
>RF01960;SSU_rRNA_eukarya;U40920.1/2-1796 44457:coccoid chlorophyte
sp. CCMP1220
Length = 1795
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 321 ggcctaccatggtggtaacgggtgacgga 349
>RF01960;SSU_rRNA_eukarya;U40919.1/2-1777 44455:coccoid chlorophyte
sp. CCMP1407
Length = 1776
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 322 ggcctaccatggtggtaacgggtgacgga 350
>RF01960;SSU_rRNA_eukarya;AF087127.1/1-1777 31354:Compsopogon
caeruleus
Length = 1777
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 312 ggcctaccatggtggtaacgggtgacgga 340
>RF01960;SSU_rRNA_eukarya;DQ504355.1/1-1669 385046:uncultured
taxopodid-like
Length = 1669
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||| ||||||||||||||||
Sbjct: 262 ggcctaccatggcggtgacgggtgacgga 290
>RF01960;SSU_rRNA_eukarya;EF023132.1/278-2152 404764:Xanthopyginae
environmental sample
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
||||||| |||||||||||||||||||||
Sbjct: 323 ggcctactatggtggtgacgggtgacgga 351
>RF01960;SSU_rRNA_eukarya;EF023333.1/1-1799 404758:Neanurini
environmental sample
Length = 1799
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 344 ggcctaccatggtggtaacgggtgacgga 372
>RF01960;SSU_rRNA_eukarya;AY834758.2/1-1740 317906:Leptonerilla
prospera
Length = 1740
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
||||||| |||||||||||||||||||||
Sbjct: 319 ggcctactatggtggtgacgggtgacgga 347
>RF01960;SSU_rRNA_eukarya;AY919773.1/1-1758 315268:uncultured
freshwater cryptophyte
Length = 1758
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 343 ggcctaccatggtgttgacgggtgacgga 371
>RF01960;SSU_rRNA_eukarya;U53127.1/1-1871 46948:Rhodomonas
abbreviata
Length = 1871
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 412 ggcctaccatggtgttgacgggtgacgga 440
>RF01960;SSU_rRNA_eukarya;DQ228120.1/1-1701 52970:Rhodomonas salina
Length = 1701
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 394 ggcctaccatggtgttgacgggtgacgga 422
>RF01960;SSU_rRNA_eukarya;AJ420694.1/1-1835 179804:Rhodomonas sp.
M1630
Length = 1835
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 355 ggcctaccatggtgttgacgggtgacgga 383
>RF01960;SSU_rRNA_eukarya;X55032.1/7-1881 3034:Pyrenomonas salina
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 404 ggcctaccatggtgttgacgggtgacgga 432
>RF01960;SSU_rRNA_eukarya;AJ421146.1/1-1787 77931:Teleaulax
amphioxeia
Length = 1787
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 327 ggcctaccatggtgttgacgggtgacgga 355
>RF01960;SSU_rRNA_eukarya;AJ420692.1/1-1764 77928:Proteomonas
sulcata
Length = 1764
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 349 ggcctaccatggtgttgacgggtgacgga 377
>RF01960;SSU_rRNA_eukarya;U53123.1/1-1839 46947:Geminigera cryophila
Length = 1839
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 366 ggcctaccatggtgttgacgggtgacgga 394
>RF01960;SSU_rRNA_eukarya;AM901027.1/64-1926 42766:Komma caudata
Length = 1863
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 288 ggcctaccatggtgttgacgggtgacgga 316
>RF01960;SSU_rRNA_eukarya;U53121.1/122-1996 42766:Komma caudata
Length = 1875
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 257 ggcctaccatggtgttgacgggtgacgga 285
>RF01960;SSU_rRNA_eukarya;AJ420689.1/94-1930 95528:Falcomonas
daucoides
Length = 1837
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 331 ggcctaccatggtgttgacgggtgacgga 359
>RF01960;SSU_rRNA_eukarya;AM901031.1/1-1756 478124:Chroomonas sp.
M1953
Length = 1756
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 285 ggcctaccatggtgttgacgggtgacgga 313
>RF01960;SSU_rRNA_eukarya;AJ420678.2/1-1835 179792:Chroomonas sp.
M1312
Length = 1835
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 361 ggcctaccatggtgttgacgggtgacgga 389
>RF01960;SSU_rRNA_eukarya;AM901037.1/24-1810 478127:Chroomonas
coerulea
Length = 1787
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 329 ggcctaccatggtgttgacgggtgacgga 357
>RF01960;SSU_rRNA_eukarya;AM901028.1/1-1792 478122:Chroomonas sp.
M1624
Length = 1792
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 323 ggcctaccatggtgttgacgggtgacgga 351
>RF01960;SSU_rRNA_eukarya;AM901014.1/1-1691 478118:Chroomonas sp.
CCAP 978/3
Length = 1691
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 228 ggcctaccatggtgttgacgggtgacgga 256
>RF01960;SSU_rRNA_eukarya;DQ519363.1/1-1690 296652:Chroomonas
pauciplastida
Length = 1690
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 365 ggcctaccatggtgttgacgggtgacgga 393
>RF01960;SSU_rRNA_eukarya;EF594301.1/1-1661 464989:Hemiselmis
cryptochromatica
Length = 1661
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 351 ggcctaccatggtgttgacgggtgacgga 379
>RF01960;SSU_rRNA_eukarya;AM901020.1/1-1788 478131:Hemiselmis
pacifica
Length = 1788
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 324 ggcctaccatggtgttgacgggtgacgga 352
>RF01960;SSU_rRNA_eukarya;AM396372.1/1-1699 400143:Cryptomonas
obovoidea
Length = 1699
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||||
Sbjct: 290 ggcctaccatggtgttgacgggtgacgga 318
>RF01960;SSU_rRNA_eukarya;AY929914.1/1-1673 325077:Vannella sp.
strain CAZ6/I
Length = 1673
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
|||||| |||| |||||||||||||||||||||
Sbjct: 310 taggggactacgatggtggtgacgggtgacgga 342
>RF01960;SSU_rRNA_eukarya;AY929922.1/1-1696 325065:Platyamoeba sp.
strain CAZ7/I
Length = 1696
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 taggggcctaccatggtggtgacgggtgacgga 33
|||||| |||| |||||||||||||||||||||
Sbjct: 321 taggggactacgatggtggtgacgggtgacgga 353
>RF01960;SSU_rRNA_eukarya;EF023410.1/1-1814 404735:uncultured
Eimeriidae
Length = 1814
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 333 ggcctaccatggtggtaacgggtgacgga 361
>RF01960;SSU_rRNA_eukarya;EF023257.1/1-1776 404735:uncultured
Eimeriidae
Length = 1776
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 332 ggcctaccatggtggtaacgggtgacgga 360
>RF01960;SSU_rRNA_eukarya;EF023940.1/1-1793 404735:uncultured
Eimeriidae
Length = 1793
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgga 33
|||||||||||||||| ||||||||||||
Sbjct: 344 ggcctaccatggtggtaacgggtgacgga 372
>RF01960;SSU_rRNA_eukarya;AF168846.1/1-1725 4644:Globba curtisii
Length = 1725
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 gcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||| |||||
Sbjct: 313 gcctaccatggtggtgacgggtaacgga 340
>RF01960;SSU_rRNA_eukarya;X75517.1/1-1806 53574:Selaginella vogelii
Length = 1806
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
||||||||||||||||||||||| ||||
Sbjct: 340 ggcctaccatggtggtgacgggtaacgg 367
>RF01960;SSU_rRNA_eukarya;AF189073.1/1-1639 135265:Prasiola
furfuracea
Length = 1639
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
|||||||||||||||| |||||||||||
Sbjct: 283 ggcctaccatggtggtaacgggtgacgg 310
>RF01960;SSU_rRNA_eukarya;AB251590.1/160-2034 3111:Prototheca
wickerhamii
Length = 1875
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
|||||||||||||||| |||||||||||
Sbjct: 219 ggcctaccatggtggtaacgggtgacgg 246
>RF01960;SSU_rRNA_eukarya;AB251588.1/155-2029 3111:Prototheca
wickerhamii
Length = 1875
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
|||||||||||||||| |||||||||||
Sbjct: 228 ggcctaccatggtggtaacgggtgacgg 255
>RF01960;SSU_rRNA_eukarya;AB251596.1/168-2041 3111:Prototheca
wickerhamii
Length = 1874
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
|||||||||||||||| |||||||||||
Sbjct: 215 ggcctaccatggtggtaacgggtgacgg 242
>RF01960;SSU_rRNA_eukarya;AB183195.1/149-2023 3111:Prototheca
wickerhamii
Length = 1875
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
|||||||||||||||| |||||||||||
Sbjct: 224 ggcctaccatggtggtaacgggtgacgg 251
>RF01960;SSU_rRNA_eukarya;AB244739.1/167-2040 3111:Prototheca
wickerhamii
Length = 1874
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
|||||||||||||||| |||||||||||
Sbjct: 222 ggcctaccatggtggtaacgggtgacgg 249
>RF01960;SSU_rRNA_eukarya;AB251598.1/142-2016 3111:Prototheca
wickerhamii
Length = 1875
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
|||||||||||||||| |||||||||||
Sbjct: 225 ggcctaccatggtggtaacgggtgacgg 252
>RF01960;SSU_rRNA_eukarya;AB251593.1/142-2016 3111:Prototheca
wickerhamii
Length = 1875
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
|||||||||||||||| |||||||||||
Sbjct: 241 ggcctaccatggtggtaacgggtgacgg 268
>RF01960;SSU_rRNA_eukarya;AB251585.1/166-2040 3111:Prototheca
wickerhamii
Length = 1875
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
|||||||||||||||| |||||||||||
Sbjct: 217 ggcctaccatggtggtaacgggtgacgg 244
>RF01960;SSU_rRNA_eukarya;AB251592.1/166-2038 3111:Prototheca
wickerhamii
Length = 1873
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
|||||||||||||||| |||||||||||
Sbjct: 217 ggcctaccatggtggtaacgggtgacgg 244
>RF01960;SSU_rRNA_eukarya;AF279202.1/40-1914 161049:Microcyphus
olivaceus
Length = 1875
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 gcctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||||| |||||
Sbjct: 364 gcctaccatggtggtgacgggtaacgga 391
>RF01960;SSU_rRNA_eukarya;AY620914.1/1-1793 296217:Cercoleipus
coelonotus
Length = 1793
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 gcctaccatggtggtgacgggtgacgga 33
|||||||||||| |||||||||||||||
Sbjct: 335 gcctaccatggttgtgacgggtgacgga 362
>RF01960;SSU_rRNA_eukarya;AY620945.2/1-1799 296283:Similantennurella
spinata
Length = 1799
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 gcctaccatggtggtgacgggtgacgga 33
|||||||||||| |||||||||||||||
Sbjct: 347 gcctaccatggttgtgacgggtgacgga 374
>RF01960;SSU_rRNA_eukarya;AY620916.1/1-1805 281675:Euzercon latum
Length = 1805
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 gcctaccatggtggtgacgggtgacgga 33
|||||||||||| |||||||||||||||
Sbjct: 346 gcctaccatggttgtgacgggtgacgga 373
>RF01960;SSU_rRNA_eukarya;AF007542.1/1-1758 61418:Spiromyces minutus
Length = 1758
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
||||||||||||||||||||||| ||||
Sbjct: 301 ggcctaccatggtggtgacgggtaacgg 328
>RF01960;SSU_rRNA_eukarya;AY228493.1/1-1762 225544:Candida sp. BCC
7722
Length = 1762
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
|||||||||||||||| |||||||||||
Sbjct: 321 ggcctaccatggtggtaacgggtgacgg 348
>RF01960;SSU_rRNA_eukarya;AB000644.1/1-1750 44078:Dipodascus
geniculatus
Length = 1750
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 ggcctaccatggtggtgacgggtgacgg 32
|||||||||||||||| |||||||||||
Sbjct: 310 ggcctaccatggtggtaacgggtgacgg 337
>RF01960;SSU_rRNA_eukarya;U18623.1/1-1482 37231:Botrychium lunaria
(moonwort)
Length = 1482
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 cctaccatggtggtgacgggtgacgga 33
|||||||||||||| ||||||||||||
Sbjct: 118 cctaccatggtggtaacgggtgacgga 144
>RF01960;SSU_rRNA_eukarya;AY746984.1/1-1835 310835:Meiopriapulus sp.
JKP-2005
Length = 1835
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 gcctaccatggtggtgacgggtgacgg 32
||||||||||||| |||||||||||||
Sbjct: 366 gcctaccatggtgttgacgggtgacgg 392
>RF01960;SSU_rRNA_eukarya;U06482.1/325-2199 30094:Trioza eugeniae
(eugenia psyllid)
Length = 1875
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 gcctaccatggtggtgacgggtgacgg 32
||||||||||||||| |||||||||||
Sbjct: 88 gcctaccatggtggtaacgggtgacgg 114
>RF01960;SSU_rRNA_eukarya;AY521891.1/93-1967 270889:Zorotypus
novobrittanicus
Length = 1875
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 gcctaccatggtggtgacgggtgacgg 32
||||||||||||| |||||||||||||
Sbjct: 266 gcctaccatggtgttgacgggtgacgg 292
>RF01960;SSU_rRNA_eukarya;AY620913.1/1-1797 296215:Asternoseius sp.
AL5252
Length = 1797
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 gcctaccatggtggtgacgggtgacgg 32
|||||||||||| ||||||||||||||
Sbjct: 345 gcctaccatggttgtgacgggtgacgg 371
>RF01960;SSU_rRNA_eukarya;AY884159.1/1-1665 311531:Ceratonereis
erythraeenis
Length = 1665
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 gcctaccatggtggtgacgggtgacgg 32
||||||||||||||| |||||||||||
Sbjct: 351 gcctaccatggtggttacgggtgacgg 377
>RF01960;SSU_rRNA_eukarya;EU287799.1/1-1801 329655:uncultured marine
Polycystinea
Length = 1801
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 gggcctaccatggtggtgacgggtgacgga 33
||||||||||||| |||||||||| |||||
Sbjct: 330 gggcctaccatggcggtgacgggtaacgga 359
>RF01960;SSU_rRNA_eukarya;EU669913.1/1-1705 537876:Tylenchida cf.
Helionema sp. MHMH-2008
Length = 1705
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 ctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||| |||||
Sbjct: 288 ctaccatggtggtgacgggtaacgga 313
>RF01960;SSU_rRNA_eukarya;AY284588.1/1-1735 211182:Tylenchus
davainei
Length = 1735
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 ctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||| |||||
Sbjct: 319 ctaccatggtggtgacgggtaacgga 344
>RF01960;SSU_rRNA_eukarya;AY284590.1/1-1706 290119:Ottolenchus
discrepans
Length = 1706
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 ctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||| |||||
Sbjct: 302 ctaccatggtggtgacgggtaacgga 327
>RF01960;SSU_rRNA_eukarya;AY284587.1/3-1588 293563:Malenchus
andrassyi
Length = 1586
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 ctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||| |||||
Sbjct: 188 ctaccatggtggtgacgggtaacgga 213
>RF01960;SSU_rRNA_eukarya;EU130839.1/1-1741 364566:Basiria gracilis
Length = 1741
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 ctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||| |||||
Sbjct: 290 ctaccatggtggtgacgggtaacgga 315
>RF01960;SSU_rRNA_eukarya;AY284612.1/1-1716 45935:Pratylenchus
thornei
Length = 1716
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 ctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||| |||||
Sbjct: 305 ctaccatggtggtgacgggtaacgga 330
>RF01960;SSU_rRNA_eukarya;AF202157.1/1-1643 114877:Pratylenchoides
magnicauda
Length = 1643
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 ctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||| |||||
Sbjct: 273 ctaccatggtggtgacgggtaacgga 298
>RF01960;SSU_rRNA_eukarya;EU669959.1/1-1711 362339:Hirschmanniella
gracilis
Length = 1711
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 ctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||| |||||
Sbjct: 288 ctaccatggtggtgacgggtaacgga 313
>RF01960;SSU_rRNA_eukarya;DQ912919.1/1-1725 57562:Belonolaimus
longicaudatus
Length = 1725
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 ctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||| |||||
Sbjct: 287 ctaccatggtggtgacgggtaacgga 312
>RF01960;SSU_rRNA_eukarya;EU682392.1/1-1695 114906:Subanguina
radicicola
Length = 1695
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 ctaccatggtggtgacgggtgacgga 33
|||||||||||||||||||| |||||
Sbjct: 286 ctaccatggtggtgacgggtaacgga 311
>RF01960;SSU_rRNA_eukarya;AY743944.1/1-1640 294128:Hyalella azteca
Length = 1640
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 ctaccatggtggtgacgggtgacgga 33
||||||||||||| ||||||||||||
Sbjct: 276 ctaccatggtggtaacgggtgacgga 301
>RF01960;SSU_rRNA_eukarya;X81374.1/1-1875 37097:Rhodomonas mariana
Length = 1875
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 ctaccatggtggtgacgggtgacgga 33
||||||||||| ||||||||||||||
Sbjct: 417 ctaccatggtgttgacgggtgacgga 442
>RF01960;SSU_rRNA_eukarya;AY929913.1/1-1665 325084:Vannella sp.
strain W181G/I
Length = 1665
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 ctaccatggtggtgacgggtgacgga 33
|||| |||||||||||||||||||||
Sbjct: 316 ctacgatggtggtgacgggtgacgga 341
