miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00645;MIR169_2;AARH01001852.1/3885-3676 3694:Populus trichocarpa
Length = 210
Score = 295 bits (149), Expect = 2e-79
Identities = 198/214 (92%), Gaps = 4/214 (1%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcctgtagcctccctcggattcaagaacacga 99
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 agtcttgtttggtagccaaggatgacttgcctgtagcctccctcggattcatgaacacga 60
Query: 100 gcatttatgcagtgctcaaaagaaaaggagagaatgatcccagcttgctgcgcgctacaa 159
||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||
Sbjct: 61 gcatttatgtggtgctcaaaagaaaaggagagaatgatcccagctggcagcg----acaa 116
Query: 160 ggtcaatccatggaagcagcgagaagaaggtggtttatagctagaatcctcatgaggttc 219
||||||||||| |||| ||||||||| ||||| |||||||||||||||| || |||||||
Sbjct: 117 ggtcaatccattgaagtagcgagaagcaggtgatttatagctagaatccacaagaggttc 176
Query: 220 acagcaagtgtccttggctaacgagacgggctct 253
|||||||||||||||||||||||||||||||||
Sbjct: 177 ccagcaagtgtccttggctaacgagacgggctct 210
>RF00865;MIR169_5;AARH01000583.1/30070-29928 3694:Populus
trichocarpa
Length = 143
Score = 75.8 bits (38), Expect = 3e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 35 taaagagtcttgtttggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||||||||||||||||
Sbjct: 141 taaagagtcttgtttggtagccaaggatgacttgcctg 104
>RF00865;MIR169_5;AC216452.1/111365-111227 3694:Populus trichocarpa
Length = 139
Score = 71.9 bits (36), Expect = 5e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 37 aagagtcttgtttggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||||||||||||||
Sbjct: 135 aagagtcttgtttggtagccaaggatgacttgcctg 100
>RF00865;MIR169_5;ABIM01014270.1/4571-4728 3649:Carica papaya
(papaya)
Length = 158
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 37 aagagtcttgtttggtagccaaggatgacttgcctgtagcctc 79
||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 154 aagagtcttgtttggtagccaagaatgacttgcctgcagcctc 112
>RF00865;MIR169_5;AASG02001447.1/39455-39304 3988:Ricinus communis
(castor bean)
Length = 152
Score = 67.9 bits (34), Expect = 8e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 32 agataaagagtcttgtttggtagccaaggatgacttgcctgtagcc 77
|||| |||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 152 agatgaagagtctcgtttggtagccaaggatgacttgcctgcagcc 107
>RF00865;MIR169_5;ABIM01001939.1/16104-16248 3649:Carica papaya
(papaya)
Length = 145
Score = 65.9 bits (33), Expect = 3e-10
Identities = 40/41 (97%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 32 agataaagagtc-ttgtttggtagccaaggatgacttgcct 71
|||||||||||| ||||||||||||||||||||||||||||
Sbjct: 145 agataaagagtcattgtttggtagccaaggatgacttgcct 105
>RF00645;MIR169_2;AC216452.1/111234-111359 3694:Populus
trichocarpa
Length = 126
Score = 65.9 bits (33), Expect = 3e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcctg 72
|||||||||||||||||||||||||||||||||
Sbjct: 1 agtcttgtttggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AARH01000583.1/29935-30064 3694:Populus
trichocarpa
Length = 130
Score = 65.9 bits (33), Expect = 3e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcctg 72
|||||||||||||||||||||||||||||||||
Sbjct: 1 agtcttgtttggtagccaaggatgacttgcctg 33
>RF00865;MIR169_5;AARH01000583.1/30355-30198 3694:Populus
trichocarpa
Length = 158
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 37 aagagtcttgtttggtagccaaggatgacttgcctg 72
|||||||||||||| |||||||||||||||||||||
Sbjct: 154 aagagtcttgtttgatagccaaggatgacttgcctg 119
>RF00865;MIR169_5;AARH01009234.1/70247-70410 3694:Populus
trichocarpa
Length = 164
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 37 aagagtcttgtttggtagccaaggatgacttgcctg 72
|||||||||||||| |||||||||||||||||||||
Sbjct: 160 aagagtcttgtttgatagccaaggatgacttgcctg 125
>RF00865;MIR169_5;AASG02003632.1/18586-18737 3988:Ricinus communis
(castor bean)
Length = 152
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 37 aagagtcttgtttggtagccaaggatgacttgcctg 72
|||||||||||||| |||||||||||||||||||||
Sbjct: 148 aagagtcttgtttgatagccaaggatgacttgcctg 113
>RF00645;MIR169_2;ABIM01014270.1/4721-4577 3649:Carica papaya
(papaya)
Length = 145
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcctgtagcctc 79
|||||||||||||||||||| |||||||||||| ||||||
Sbjct: 1 agtcttgtttggtagccaagaatgacttgcctgcagcctc 40
>RF00865;MIR169_5;AASG02003632.1/10304-10430 3988:Ricinus communis
(castor bean)
Length = 127
Score = 61.9 bits (31), Expect = 5e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 36 aaagagtcttgtttggtagccaaggatgacttgcc 70
||||||| |||||||||||||||||||||||||||
Sbjct: 124 aaagagtgttgtttggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;CAAP02000122.1/24661-24522 29760:Vitis vinifera
Length = 140
Score = 61.9 bits (31), Expect = 5e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 33 gataaagagtcttgtttggtagccaaggatgacttgcct 71
|||||||||||| || |||||||||||||||||||||||
Sbjct: 140 gataaagagtctcgtctggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;AARH01003823.1/108214-108346 3694:Populus
trichocarpa
Length = 133
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 37 aagagtcttgtttggtagccaaggatgacttgcc 70
||||||| ||||||||||||||||||||||||||
Sbjct: 129 aagagtcgtgtttggtagccaaggatgacttgcc 96
>RF00865;MIR169_5;AARH01000472.1/145584-145453 3694:Populus
trichocarpa
Length = 132
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 37 aagagtcttgtttggtagccaaggatgacttgcc 70
||||||| ||||||||||||||||||||||||||
Sbjct: 128 aagagtcgtgtttggtagccaaggatgacttgcc 95
>RF00645;MIR169_2;AASG02001447.1/39312-39449 3988:Ricinus communis
(castor bean)
Length = 138
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcctgtagcc 77
||||| ||||||||||||||||||||||||||| ||||
Sbjct: 1 agtctcgtttggtagccaaggatgacttgcctgcagcc 38
>RF00865;MIR169_5;AB016889.1/38805-38989 3702:Arabidopsis thaliana
(thale cress)
Length = 185
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 36 aaagagtcttgtttggtagccaaggatgacttgcctg 72
|||||||| ||||| ||||||||||||||||||||||
Sbjct: 182 aaagagtcatgtttagtagccaaggatgacttgcctg 146
>RF00865;MIR169_5;AASG02003941.1/7918-8066 3988:Ricinus communis
(castor bean)
Length = 149
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 36 aaagagtcttgtttggtagccaaggatgacttgcctg 72
|||||||||||| || |||||||||||||||||||||
Sbjct: 146 aaagagtcttgtctgatagccaaggatgacttgcctg 110
>RF00865;MIR169_5;AASG02003632.1/6431-6569 3988:Ricinus communis
(castor bean)
Length = 139
Score = 58.0 bits (29), Expect = 7e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 36 aaagagtcttgtttggtagccaaggatgacttgcctg 72
||||||||||||||| |||||||| ||||||||||||
Sbjct: 136 aaagagtcttgtttgatagccaagaatgacttgcctg 100
>RF00645;MIR169_2;AARH01000583.1/30205-30349 3694:Populus
trichocarpa
Length = 145
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcctg 72
||||||||||| |||||||||||||||||||||
Sbjct: 1 agtcttgtttgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AC216452.1/111514-111664 3694:Populus
trichocarpa
Length = 151
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcctg 72
||||||||||| |||||||||||||||||||||
Sbjct: 1 agtcttgtttgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02003632.1/18730-18592 3988:Ricinus communis
(castor bean)
Length = 139
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcctg 72
||||||||||| |||||||||||||||||||||
Sbjct: 1 agtcttgtttgatagccaaggatgacttgcctg 33
>RF00865;MIR169_5;ABIM01022203.1/1875-2012 3649:Carica papaya
(papaya)
Length = 138
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 45 tgtttggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||||||
Sbjct: 123 tgtttggtagccaaggatgacttgcctg 96
>RF00865;MIR169_5;CU468266.5/4267-4422 3880:Medicago truncatula
(barrel medic)
Length = 156
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 32 agataaagagtcttgtttggtagccaaggatgacttgcct 71
|||| ||||||| |||||| ||||||||||||||||||||
Sbjct: 156 agatgaagagtcatgtttgatagccaaggatgacttgcct 117
>RF00865;MIR169_5;CAAP02000001.1/222751-222589 29760:Vitis vinifera
Length = 163
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 37 aagagtcttgtttggtagccaaggatgacttgcctg 72
||||||||||| || |||||||||||||||||||||
Sbjct: 159 aagagtcttgtctgatagccaaggatgacttgcctg 124
>RF00865;MIR169_5;EU968670.1/235-103 4577:Zea mays
Length = 133
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctgtagcctcc 80
||||||||||||||||||||||||| ||||||
Sbjct: 116 tggtagccaaggatgacttgcctgtggcctcc 85
>RF00865;MIR169_5;ABXC01001464.1/179344-179197 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctgtagcctcc 80
||||||||||||||||||||||||| ||||||
Sbjct: 131 tggtagccaaggatgacttgcctgtggcctcc 100
>RF00645;MIR169_2;ABIM01022203.1/2003-1881 3649:Carica papaya
(papaya)
Length = 123
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 45 tgtttggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||||||
Sbjct: 7 tgtttggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;ABIM01001939.1/16240-16110 3649:Carica papaya
(papaya)
Length = 131
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 ttgtttggtagccaaggatgacttgcct 71
||||||||||||||||||||||||||||
Sbjct: 6 ttgtttggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;EU968670.1/110-229 4577:Zea mays
Length = 120
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctgtagcctcc 80
||||||||||||||||||||||||| ||||||
Sbjct: 11 tggtagccaaggatgacttgcctgtggcctcc 42
>RF00645;MIR169_2;ABXC01001464.1/179202-179340 4558:Sorghum
bicolor (sorghum)
Length = 139
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctgtagcctcc 80
||||||||||||||||||||||||| ||||||
Sbjct: 13 tggtagccaaggatgacttgcctgtggcctcc 44
>RF00865;MIR169_5;AB016889.1/44658-44824 3702:Arabidopsis thaliana
(thale cress)
Length = 167
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 47 tttggtagccaaggatgacttgcctgt 73
|||||||||||||||||||||||||||
Sbjct: 153 tttggtagccaaggatgacttgcctgt 127
>RF00865;MIR169_5;AASG02002697.1/24175-24333 3988:Ricinus communis
(castor bean)
Length = 159
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 46 gtttggtagccaaggatgacttgcctg 72
|||||||||||||||||||||||||||
Sbjct: 145 gtttggtagccaaggatgacttgcctg 119
>RF00645;MIR169_2;AB016889.1/44816-44664 3702:Arabidopsis thaliana
(thale cress)
Length = 153
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 47 tttggtagccaaggatgacttgcctgt 73
|||||||||||||||||||||||||||
Sbjct: 7 tttggtagccaaggatgacttgcctgt 33
>RF00645;MIR169_2;AARH01003823.1/108339-108220 3694:Populus
trichocarpa
Length = 120
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcc 70
|||| ||||||||||||||||||||||||||
Sbjct: 1 agtcgtgtttggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AARH01000472.1/145460-145578 3694:Populus
trichocarpa
Length = 119
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcc 70
|||| ||||||||||||||||||||||||||
Sbjct: 1 agtcgtgtttggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AASG02002697.1/24326-24181 3988:Ricinus communis
(castor bean)
Length = 146
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 46 gtttggtagccaaggatgacttgcctg 72
|||||||||||||||||||||||||||
Sbjct: 8 gtttggtagccaaggatgacttgcctg 34
>RF00865;MIR169_5;AY551206.1/170-33 3702:Arabidopsis thaliana (thale
cress)
Length = 138
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 43 cttgtttggtagccaaggatgacttgcctg 72
||||| ||||||||||||||||||||||||
Sbjct: 129 cttgtgtggtagccaaggatgacttgcctg 100
>RF00865;MIR169_5;AY551202.1/194-30 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 47 tttggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||||
Sbjct: 151 tttggtagccaaggatgacttgcctg 126
>RF00865;MIR169_5;AY551200.1/193-29 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 47 tttggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||||
Sbjct: 151 tttggtagccaaggatgacttgcctg 126
>RF00865;MIR169_5;AARH01006471.1/67165-67023 3694:Populus
trichocarpa
Length = 143
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 46 gtttggtagccaaggatgacttgcct 71
||||||||||||||||||||||||||
Sbjct: 127 gtttggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;CAAP02000001.1/222970-222840 29760:Vitis vinifera
Length = 131
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 43 cttgtttggtagccaaggatgacttgcctg 72
||||| ||||||||||||||||||||||||
Sbjct: 121 cttgtgtggtagccaaggatgacttgcctg 92
>RF00865;MIR169_5;AACV01018924.1/12529-12684 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctgta 74
||||||||||||||||||||||||||
Sbjct: 140 tggtagccaaggatgacttgcctgta 115
>RF00645;MIR169_2;AY551202.1/37-188 3702:Arabidopsis thaliana
(thale cress)
Length = 152
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 47 tttggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AC025808.8/28771-28647 3702:Arabidopsis thaliana
(thale cress)
Length = 125
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 43 cttgtttggtagccaaggatgacttgcctg 72
||||| ||||||||||||||||||||||||
Sbjct: 3 cttgtgtggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AB016889.1/38604-38454 3702:Arabidopsis thaliana
(thale cress)
Length = 151
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 47 tttggtagccaaggatgacttgcctg 72
||||||||||||||||||||||||||
Sbjct: 7 tttggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AARH01006471.1/67030-67159 3694:Populus
trichocarpa
Length = 130
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 46 gtttggtagccaaggatgacttgcct 71
||||||||||||||||||||||||||
Sbjct: 10 gtttggtagccaaggatgacttgcct 35
>RF00645;MIR169_2;CAAP02000001.1/222847-222964 29760:Vitis
vinifera
Length = 118
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 43 cttgtttggtagccaaggatgacttgcctg 72
||||| ||||||||||||||||||||||||
Sbjct: 4 cttgtgtggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AP008214.1/26806653-26806795 39947:Oryza sativa
Japonica Group
Length = 143
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctgta 74
||||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctgta 35
>RF00865;MIR169_5;AC189356.2/133226-133094 51351:Brassica rapa
subsp. pekinensis
Length = 133
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 44 ttgtttggtagccaaggatgacttgcctg 72
|||| ||||||||||||||||||||||||
Sbjct: 122 ttgtgtggtagccaaggatgacttgcctg 94
>RF00865;MIR169_5;AB016889.1/45011-45196 3702:Arabidopsis thaliana
(thale cress)
Length = 186
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 36 aaagagtcttgtttggtagccaaggatgacttgcctg 72
|||| ||| ||||| ||||||||||||||||||||||
Sbjct: 183 aaagcgtcatgtttagtagccaaggatgacttgcctg 147
>RF00865;MIR169_5;AY551203.1/210-25 3702:Arabidopsis thaliana (thale
cress)
Length = 186
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 36 aaagagtcttgtttggtagccaaggatgacttgcctg 72
|||||||| ||||| |||||||||||||||||||||
Sbjct: 183 aaagagtcatgtttaatagccaaggatgacttgcctg 147
>RF00865;MIR169_5;AARH01000472.1/145345-145210 3694:Populus
trichocarpa
Length = 136
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 37 aagagtcttgtttggtagccaaggatgacttgcctgt 73
|||||||||||| | |||||||||| |||||||||||
Sbjct: 132 aagagtcttgttagttagccaaggacgacttgcctgt 96
>RF00865;MIR169_5;AARH01004262.1/629-776 3694:Populus trichocarpa
Length = 148
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 37 aagagtcttgtttggtagccaagga 61
|||||||||||||||||||||||||
Sbjct: 144 aagagtcttgtttggtagccaagga 120
>RF00865;MIR169_5;AASG02003632.1/18323-18451 3988:Ricinus communis
(castor bean)
Length = 129
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 46 gtttggtagccaaggatgacttgcc 70
|||||||||||||||||||||||||
Sbjct: 114 gtttggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;ABXC01004203.1/1754-1629 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 47 tttggtagccaaggatgacttgcct 71
|||||||||||||||||||||||||
Sbjct: 111 tttggtagccaaggatgacttgcct 87
>RF00865;MIR169_5;ABXC01004204.1/1140-1015 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 47 tttggtagccaaggatgacttgcct 71
|||||||||||||||||||||||||
Sbjct: 111 tttggtagccaaggatgacttgcct 87
>RF00865;MIR169_5;AP004464.3/58814-58687 39947:Oryza sativa Japonica
Group
Length = 128
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctgt 73
|||||||||||||||||||||||||
Sbjct: 111 tggtagccaaggatgacttgcctgt 87
>RF00865;MIR169_5;AK240880.1/275-135 39947:Oryza sativa Japonica
Group
Length = 141
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctgt 73
|||||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgcctgt 100
>RF00865;MIR169_5;AY551246.1/188-45 4530:Oryza sativa (rice)
Length = 144
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcctgt 73
|||||||||||||||||||||||||
Sbjct: 127 tggtagccaaggatgacttgcctgt 103
>RF00645;MIR169_2;ABIM01014270.1/4373-4157 3649:Carica papaya
(papaya)
Length = 217
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 44 ttgtttggtagccaaggatgacttgcctg 72
|||| ||||||||||||||||||||||||
Sbjct: 6 ttgtctggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;AC189356.2/133102-133219 51351:Brassica rapa
subsp. pekinensis
Length = 118
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 44 ttgtttggtagccaaggatgacttgcctg 72
|||| ||||||||||||||||||||||||
Sbjct: 4 ttgtgtggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AY551201.1/49-220 3702:Arabidopsis thaliana
(thale cress)
Length = 172
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcctg 72
|||| ||||| ||||||||||||||||||||||
Sbjct: 1 agtcatgtttagtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02003632.1/18444-18329 3988:Ricinus communis
(castor bean)
Length = 116
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 gtttggtagccaaggatgacttgcc 70
|||||||||||||||||||||||||
Sbjct: 9 gtttggtagccaaggatgacttgcc 33
>RF00645;MIR169_2;AASG02003632.1/6562-6437 3988:Ricinus communis
(castor bean)
Length = 126
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcctg 72
||||||||||| |||||||| ||||||||||||
Sbjct: 1 agtcttgtttgatagccaagaatgacttgcctg 33
>RF00645;MIR169_2;AASG02003941.1/8059-7924 3988:Ricinus communis
(castor bean)
Length = 136
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcctg 72
|||||||| || |||||||||||||||||||||
Sbjct: 1 agtcttgtctgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;CAAP02000903.1/14911-14657 29760:Vitis vinifera
Length = 255
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 44 ttgtttggtagccaaggatgacttgcctgtagcctcc 80
|||||||||||| ||||||||||||||| |||||||
Sbjct: 7 ttgtttggtagcgaaggatgacttgcctacagcctcc 43
>RF00645;MIR169_2;AM487000.2/29208-29357 29760:Vitis vinifera
Length = 150
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcctg 72
|||||||| || |||||||||||||||||||||
Sbjct: 1 agtcttgtctgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;ABXC01004203.1/1636-1748 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 47 tttggtagccaaggatgacttgcct 71
|||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;ABXC01004204.1/1022-1134 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 47 tttggtagccaaggatgacttgcct 71
|||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;AC137595.2/89199-89329 39947:Oryza sativa
Japonica Group
Length = 131
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctgt 73
|||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctgt 35
>RF00645;MIR169_2;AP004464.3/58694-58808 39947:Oryza sativa
Japonica Group
Length = 115
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctgt 73
|||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctgt 35
>RF00645;MIR169_2;CT835986.1/139-261 39946:Oryza sativa Indica
Group
Length = 123
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcctgt 73
|||||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcctgt 30
>RF00865;MIR169_5;AASG02002697.1/26715-26592 3988:Ricinus communis
(castor bean)
Length = 124
Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 36 aaagagtcttgtttggtagccaaggatgactt 67
||||||| | ||||||||||||||||||||||
Sbjct: 121 aaagagtgtggtttggtagccaaggatgactt 90
>RF00865;MIR169_5;ABXC01001464.1/182182-182031 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 48.1 bits (24), Expect = 7e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 52 tagccaaggatgacttgcctgtagcctc 79
|||||||||||||||||||||| |||||
Sbjct: 133 tagccaaggatgacttgcctgtggcctc 106
>RF00865;MIR169_5;AACV01020369.1/3584-3757 39947:Oryza sativa
Japonica Group
Length = 174
Score = 48.1 bits (24), Expect = 7e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 52 tagccaaggatgacttgcctgtagcctc 79
|||||||||||||||||||||| |||||
Sbjct: 155 tagccaaggatgacttgcctgtggcctc 128
>RF00645;MIR169_2;AB016889.1/45191-45017 3702:Arabidopsis thaliana
(thale cress)
Length = 175
Score = 48.1 bits (24), Expect = 7e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 45 tgtttggtagccaaggatgacttgcctg 72
||||| ||||||||||||||||||||||
Sbjct: 8 tgtttagtagccaaggatgacttgcctg 35
>RF00645;MIR169_2;AARH01004261.1/78455-78341 3694:Populus
trichocarpa
Length = 115
Score = 48.1 bits (24), Expect = 7e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 43 cttgtttggtagccaaggatgacttgcc 70
||||||||||||||||||| ||||||||
Sbjct: 3 cttgtttggtagccaaggacgacttgcc 30
>RF00645;MIR169_2;CU468266.5/4414-4273 3880:Medicago truncatula
(barrel medic)
Length = 142
Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcct 71
|||| |||||| ||||||||||||||||||||
Sbjct: 1 agtcatgtttgatagccaaggatgacttgcct 32
>RF00645;MIR169_2;CAAP02000122.1/24529-24655 29760:Vitis vinifera
Length = 127
Score = 48.1 bits (24), Expect = 7e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 40 agtcttgtttggtagccaaggatgacttgcct 71
||||| || |||||||||||||||||||||||
Sbjct: 1 agtctcgtctggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;ABXC01001464.1/182038-182176 4558:Sorghum
bicolor (sorghum)
Length = 139
Score = 48.1 bits (24), Expect = 7e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 tagccaaggatgacttgcctgtagcctc 79
|||||||||||||||||||||| |||||
Sbjct: 13 tagccaaggatgacttgcctgtggcctc 40
>RF00645;MIR169_2;AY551243.1/20-180 4530:Oryza sativa (rice)
Length = 161
Score = 48.1 bits (24), Expect = 7e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 52 tagccaaggatgacttgcctgtagcctc 79
|||||||||||||||||||||| |||||
Sbjct: 13 tagccaaggatgacttgcctgtggcctc 40
>RF00865;MIR169_5;ABIM01022203.1/1489-1639 3649:Carica papaya
(papaya)
Length = 151
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 38 agagtcttgtttggtagccaaggatgacttgcctg 72
||||| ||||| | |||||||||||||||||||||
Sbjct: 146 agagtgttgttggatagccaaggatgacttgcctg 112
>RF00865;MIR169_5;AASG02006505.1/277-428 3988:Ricinus communis
(castor bean)
Length = 152
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 45 tgtttggtagccaaggatgacttgcct 71
|||||| ||||||||||||||||||||
Sbjct: 139 tgtttgatagccaaggatgacttgcct 113
>RF00865;MIR169_5;AASG02003632.1/6210-6338 3988:Ricinus communis
(castor bean)
Length = 129
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 44 ttgtttggtagccaaggatgacttgcc 70
|||| ||||||||||||||||||||||
Sbjct: 115 ttgtctggtagccaaggatgacttgcc 89
>RF00865;MIR169_5;AASG02002697.1/23918-24046 3988:Ricinus communis
(castor bean)
Length = 129
Score = 46.1 bits (23), Expect = 3e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 36 aaagagtcttgtttggtagccaaggatgacttgcc 70
|||||||||| |||| |||||||||||||||||||
Sbjct: 126 aaagagtctt-tttgttagccaaggatgacttgcc 93
>RF00865;MIR169_5;ABXC01005012.1/10458-10330 4558:Sorghum bicolor
(sorghum)
Length = 129
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 110 tggtagccaaggatgacttgcct 88
>RF00865;MIR169_5;ABXC01005012.1/7179-7306 4558:Sorghum bicolor
(sorghum)
Length = 128
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 112 tggtagccaaggatgacttgcct 90
>RF00865;MIR169_5;AAAA02026107.1/14351-14478 39946:Oryza sativa
Indica Group
Length = 128
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 52 tagccaaggatgacttgcctgtagcctccct 82
|||||||||||||||||||||| |||||||
Sbjct: 108 tagccaaggatgacttgcctgtgtcctccct 78
>RF00865;MIR169_5;AACV01009625.1/5578-5722 39947:Oryza sativa
Japonica Group
Length = 145
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 128 tggtagccaaggatgacttgcct 106
>RF00645;MIR169_2;AY551203.1/30-206 3702:Arabidopsis thaliana
(thale cress)
Length = 177
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 38 agagtcttgtttggtagccaaggatgacttgcctg 72
|||||| ||||| |||||||||||||||||||||
Sbjct: 1 agagtcatgtttaatagccaaggatgacttgcctg 35
>RF00645;MIR169_2;AASG02003632.1/6331-6216 3988:Ricinus communis
(castor bean)
Length = 116
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 44 ttgtttggtagccaaggatgacttgcc 70
|||| ||||||||||||||||||||||
Sbjct: 8 ttgtctggtagccaaggatgacttgcc 34
>RF00645;MIR169_2;AASG02003632.1/1429-1542 3988:Ricinus communis
(castor bean)
Length = 114
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 44 ttgtttggtagccaaggatgacttgcc 70
|||||||||||||||| ||||||||||
Sbjct: 5 ttgtttggtagccaagaatgacttgcc 31
>RF00645;MIR169_2;AASG02006505.1/420-283 3988:Ricinus communis
(castor bean)
Length = 138
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 45 tgtttggtagccaaggatgacttgcct 71
|||||| ||||||||||||||||||||
Sbjct: 6 tgtttgatagccaaggatgacttgcct 32
>RF00645;MIR169_2;ABXC01005012.1/7295-7185 4558:Sorghum bicolor
(sorghum)
Length = 111
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcct 28
>RF00645;MIR169_2;ABXC01005012.1/10344-10452 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcct 28
>RF00645;MIR169_2;AAAA02026107.1/14467-14357 39946:Oryza sativa
Indica Group
Length = 111
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 52 tagccaaggatgacttgcctgtagcctccct 82
|||||||||||||||||||||| |||||||
Sbjct: 10 tagccaaggatgacttgcctgtgtcctccct 40
>RF00645;MIR169_2;AP008210.1/19428619-19428750 39947:Oryza sativa
Japonica Group
Length = 132
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 tggtagccaaggatgacttgcct 71
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
