miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01059;mir-598;AAFR03043215.1/1072-1016 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 57
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 6 tcatcttcatcatcatcatcttcttct 32
||||| |||||||||||||||||||||
Sbjct: 27 tcatcatcatcatcatcatcttcttct 1
>RF01059;mir-598;AAWZ01049713.1/1510-1420 28377:Anolis
carolinensis (green anole)
Length = 91
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 tcatcttcatcatcatcatcttcttct 32
||||| |||||||||||||||||||||
Sbjct: 65 tcatcatcatcatcatcatcttcttct 91
>RF01059;mir-598;AAWZ01006914.1/74932-75009 28377:Anolis
carolinensis (green anole)
Length = 78
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 6 tcatcttcatcatcatcatcttcttct 32
||||| |||||||||||||||||||||
Sbjct: 33 tcatcatcatcatcatcatcttcttct 7
>RF01059;mir-598;BX842696.13/67074-67012 7955:Danio rerio
(zebrafish)
Length = 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 6 tcatcttcatcatcatcatcttcttct 32
||||| |||||||||||||||||||||
Sbjct: 33 tcatcatcatcatcatcatcttcttct 7
>RF01059;mir-598;AAWZ01023117.1/27191-27132 28377:Anolis
carolinensis (green anole)
Length = 60
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tcatcttcatcatcatcatctt 27
||||||||||||||||||||||
Sbjct: 37 tcatcttcatcatcatcatctt 58
>RF01059;mir-598;AAZO01004876.1/1291-1175 121224:Pediculus humanus
corporis (human body louse)
Length = 117
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 tcatcttcatcatcatcatcttcttc 31
|||||||||||||||||||| |||||
Sbjct: 91 tcatcttcatcatcatcatcatcttc 116
