miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00005;tRNA;AAFC03060403.1/78320-78391 :
Length = 72
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgccttgca 128
|||||||||||| |||||||||||||||||||||||
Sbjct: 1 tccctggtggtccagtggttaagaatctgccttgca 36
>RF00005;tRNA;AAFC03015676.1/57545-57474 :
Length = 72
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgccttgca 128
|||||||||||| |||||||||||||||||||||||
Sbjct: 1 tccctggtggtccagtggttaagaatctgccttgca 36
>RF00005;tRNA;AAFC03022995.1/7778-7848 :
Length = 71
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgcctt 125
|||||||||||| ||||||||||||||||||||
Sbjct: 1 tccctggtggtccagtggttaagaatctgcctt 33
>RF00005;tRNA;ABRN01157719.1/5798-5727 :
Length = 72
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgcctt 125
|||||||||||| ||||||||||||||||||||
Sbjct: 1 tccctggtggtccagtggttaagaatctgcctt 33
>RF00005;tRNA;AAFC03125201.1/21925-21853 :
Length = 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgccttgca 128
|||||||||||| |||||||| ||||||||||||||
Sbjct: 1 tccctggtggtccagtggttaggaatctgccttgca 36
>RF00005;tRNA;AAFC03082887.1/2021-2092 :
Length = 72
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgcct 124
|||||||||||| |||||||||||||||||||
Sbjct: 1 tccctggtggtccagtggttaagaatctgcct 32
>RF00005;tRNA;AAFC03121042.1/1449-1379 :
Length = 71
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgcct 124
|||||||||||| |||||||||||||||||||
Sbjct: 1 tccctggtggtctagtggttaagaatctgcct 32
>RF00005;tRNA;AAFC03111029.1/35636-35565 :
Length = 72
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 95 cctggtggtcgagtggttaagaatctgcctt 125
|||||||||| ||||||||||||||||||||
Sbjct: 3 cctggtggtccagtggttaagaatctgcctt 33
>RF00005;tRNA;AAFC03042718.1/12976-12905 :
Length = 72
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgccttg 126
|||||||||||| |||||||||||||||| ||||
Sbjct: 1 tccctggtggtctagtggttaagaatctgacttg 34
>RF00005;tRNA;AAFC03039541.1/39830-39901 :
Length = 72
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgcctt 125
|||||||||||| ||||||||||||| ||||||
Sbjct: 1 tccctggtggtccagtggttaagaatatgcctt 33
>RF00005;tRNA;AAFC03021623.1/11106-11177 :
Length = 72
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgcctt 125
|||||||||||| |||||||||||||||||||
Sbjct: 1 tccctggtggtctcgtggttaagaatctgcctt 33
>RF00005;tRNA;ABRN01369527.1/9504-9433 :
Length = 72
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgcctt 125
|||||||||||| |||||| |||||||||||||
Sbjct: 1 tccctggtggtctagtggtaaagaatctgcctt 33
>RF00005;tRNA;ABRN01094293.1/2081-2010 :
Length = 72
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgcctt 125
||||||||||| ||||||||||||||||||||
Sbjct: 1 tccctggtggtgcagtggttaagaatctgcctt 33
>RF00005;tRNA;ABRN01428137.1/2569-2498 :
Length = 72
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgcctt 125
||||||||||| ||||||||||||||||||||
Sbjct: 1 tccctggtggttcagtggttaagaatctgcctt 33
>RF00005;tRNA;ABRN01164941.1/4558-4629 :
Length = 72
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgcctt 125
|||||||||||| |||||| |||||||||||||
Sbjct: 1 tccctggtggtccagtggtaaagaatctgcctt 33
>RF00005;tRNA;ABRN01228376.1/946-1018 :
Length = 73
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctg 121
|||||||||||| ||||||||||||||||
Sbjct: 1 tccctggtggtccagtggttaagaatctg 29
>RF00005;tRNA;ABRN01163084.1/680-609 :
Length = 72
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgcctt 125
|||||||||||| |||||||||||||| |||||
Sbjct: 1 tccctggtggtccagtggttaagaatccgcctt 33
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 3 ccctgcattggcaggtggattcttacccactgtactaccaggga 46
||||||||||| ||| ||||||||| |||||| || ||||||||
Sbjct: 44 ccctgcattggaaggcggattcttaaccactggaccaccaggga 1
>RF00005;tRNA;AAFC03091178.1/87343-87272 :
Length = 72
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgccttgca 128
|||||||||||| ||||||| || ||||||||||||
Sbjct: 1 tccctggtggtctagtggttcaggatctgccttgca 36
>RF00005;tRNA;AAFC03078659.1/52754-52826 :
Length = 73
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgccttgca 128
|||||||||||| ||||||||||| ||||| |||||
Sbjct: 1 tccctggtggtctagtggttaagattctgctttgca 36
>RF00005;tRNA;ABRN01441675.1/3700-3771 :
Length = 72
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 3 ccctgcattggcaggtggattcttacccactgtactaccaggga 46
||||||||||| ||| ||||||||| |||||| || ||||||||
Sbjct: 44 ccctgcattggaaggaggattcttaaccactgaaccaccaggga 1
>RF00005;tRNA;ABRN01200331.1/4-76 :
Length = 73
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgcct 124
|||||||||||| |||||||||||||| ||||
Sbjct: 1 tccctggtggtccagtggttaagaatccgcct 32
>RF00005;tRNA;ABRN01229225.1/7025-6954 :
Length = 72
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 3 ccctgcattggcaggtggattcttacccactgtactaccaggga 46
||||| ||||| ||||||||||||| |||||| || ||||||||
Sbjct: 44 ccctgaattggaaggtggattcttaaccactggaccaccaggga 1
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatc 119
|||||||||||| ||||||||||||||
Sbjct: 1 tccctggtggtccagtggttaagaatc 27
>RF00005;tRNA;AAFC03018050.1/35536-35465 :
Length = 72
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 99 gtggtcgagtggttaagaatctgcctt 125
|||||| ||||||||||||||||||||
Sbjct: 7 gtggtccagtggttaagaatctgcctt 33
>RF00005;tRNA;AAFC03011938.1/14882-14953 :
Length = 72
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatc 119
|||||||||||| ||||||||||||||
Sbjct: 1 tccctggtggtctagtggttaagaatc 27
>RF00005;tRNA;AAFC03039213.1/90091-90019 :
Length = 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatc 119
|||||||||||| ||||||||||||||
Sbjct: 1 tccctggtggtccagtggttaagaatc 27
>RF00005;tRNA;AAFC03075399.1/20962-21034 :
Length = 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 4 cctgcattggcaggtggattcttacccactgtactaccaggga 46
|||||||||||||||||| |||| |||||| ||||||||||
Sbjct: 43 cctgcattggcaggtggactctttaccactgagctaccaggga 1
>RF00005;tRNA;ABRN01205724.1/4354-4283 :
Length = 72
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatc 119
|||||||||||| ||||||||||||||
Sbjct: 1 tccctggtggtccagtggttaagaatc 27
>RF00005;tRNA;AAFC03085074.1/99626-99697 :
Length = 72
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgccttg 126
|||||||||||| ||||||| ||||||| |||||
Sbjct: 1 tccctggtggtccagtggttgagaatctaccttg 34
>RF00005;tRNA;AAFC03082998.1/23911-23983 :
Length = 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgc 122
|||||||||||| ||||||||||| |||||
Sbjct: 1 tccctggtggtctagtggttaagattctgc 30
>RF00005;tRNA;AAFC03007061.1/17985-17913 :
Length = 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgc 122
|||||||||||| ||||||||||| |||||
Sbjct: 1 tccctggtggtctagtggttaagattctgc 30
>RF00005;tRNA;AAFC03016765.1/42182-42110 :
Length = 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgc 122
|||||||||||| ||||||||||| |||||
Sbjct: 1 tccctggtggtctagtggttaagattctgc 30
>RF00005;tRNA;AAFC03067968.1/2640-2712 :
Length = 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgc 122
|||||||||||| ||||||||||| |||||
Sbjct: 1 tccctggtggtccagtggttaagattctgc 30
>RF00005;tRNA;AAFC03031659.1/15281-15353 :
Length = 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgc 122
|||||||||||| ||||||||||| |||||
Sbjct: 1 tccctggtggtccagtggttaagattctgc 30
>RF00005;tRNA;AAFC03121906.1/36421-36350 :
Length = 72
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgc 122
|||||||||||| ||||||||||| |||||
Sbjct: 1 tccctggtggtctagtggttaagagtctgc 30
>RF00005;tRNA;AAFC03020271.1/22407-22479 :
Length = 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaat 118
|||||||||||| |||||||||||||
Sbjct: 1 tccctggtggtccagtggttaagaat 26
>RF00005;tRNA;ABRN01265479.1/3279-3206 :
Length = 74
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgc 122
|||||||||||| ||||||||||| |||||
Sbjct: 1 tccctggtggtccagtggttaagactctgc 30
>RF00005;tRNA;ABRN01439919.1/2547-2475 :
Length = 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgc 122
|||||||||||| ||||||||||| |||||
Sbjct: 1 tccctggtggtccagtggttaagactctgc 30
>RF00005;tRNA;ABRN01075616.1/842-913 :
Length = 72
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgc 122
|||||||||||| |||||||| ||||||||
Sbjct: 1 tccctggtggtccagtggttaggaatctgc 30
>RF00005;tRNA;ABRN01009833.1/336-408 :
Length = 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgc 122
|||||||||||| ||||||||||| |||||
Sbjct: 1 tccctggtggtccagtggttaagactctgc 30
>RF00005;tRNA;ABRN01448805.1/2079-2007 :
Length = 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 tccctggtggtcgagtggttaagaatctgc 122
|||||||||||| ||||||||||| |||||
Sbjct: 1 tccctggtggtccagtggttaagactctgc 30
