miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00005;tRNA;ABEG01005690.1/1803-1732 :
          Length = 72

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 102 tccgttgtggtctagtggttaggattta 129
           ||||||||||||||||||||||||||||
Sbjct: 1   tccgttgtggtctagtggttaggattta 28




>RF00005;tRNA;ABLE02015619.1/430-500 :
          Length = 71

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 107 tgtggtctagtggttaggattta 129
           |||||||||||||||||||||||
Sbjct: 6   tgtggtctagtggttaggattta 28




>RF00005;tRNA;AAPN01104207.1/983-912 :
          Length = 72

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 106 ttgtggtctagtggttaggattt 128
           |||||||||||||||||||||||
Sbjct: 5   ttgtggtctagtggttaggattt 27




>RF00005;tRNA;AAPN01413715.1/1069-998 :
          Length = 72

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 106 ttgtggtctagtggttaggattt 128
           |||||||||||||||||||||||
Sbjct: 5   ttgtggtctagtggttaggattt 27




>RF00005;tRNA;ABRN01110463.1/2702-2774 :
          Length = 73

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 106 ttgtggtctagtggttaggattt 128
           |||||||||||||||||||||||
Sbjct: 5   ttgtggtctagtggttaggattt 27




>RF00005;tRNA;AACY024031357.1/506-577 :
          Length = 72

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 106 ttgtggtctagtggttaggatt 127
           ||||||||||||||||||||||
Sbjct: 5   ttgtggtctagtggttaggatt 26




>RF00005;tRNA;ABKE01012409.1/1071-1146 :
          Length = 76

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 107 tgtggtctagtggttaggattt 128
           ||||||||||||||||||||||
Sbjct: 6   tgtggtctagtggttaggattt 27




>RF00005;tRNA;ABRN01413617.1/2064-1992 :
          Length = 73

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 108 gtggtctagtggttaggattta 129
           ||||||||||||||||||||||
Sbjct: 7   gtggtctagtggttaggattta 28




>RF00005;tRNA;ABRN01168803.1/546-475 :
          Length = 72

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 106 ttgtggtctagtggttaggatt 127
           ||||||||||||||||||||||
Sbjct: 5   ttgtggtctagtggttaggatt 26




>RF00005;tRNA;ABEP02018463.1/38611-38542 :
          Length = 70

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 107 tgtggtctagtggttaggattt 128
           ||||||||||||||||||||||
Sbjct: 6   tgtggtctagtggttaggattt 27




>RF00005;tRNA;ABEP02027142.1/9899-9970 :
          Length = 72

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 107 tgtggtctagtggttaggattt 128
           ||||||||||||||||||||||
Sbjct: 6   tgtggtctagtggttaggattt 27