miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01061;mir-548;ABGA01227794.1/7074-6991 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/82 (87%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 16 tatcaggttggtgcaaaagtaattgcgg-ttttgcaattaaacagtagtggnnaaaatct 74
|||||||||||||||||||||||||||| |||||| ||| |||||||||| |||| |
Sbjct: 1 tatcaggttggtgcaaaagtaattgcggtttttgccatt-gacagtagtggcaaaaaccg 59
Query: 75 caattatttttgcatcaaccta 96
|||||| |||||||||| ||||
Sbjct: 60 caattagttttgcatcagccta 81
>RF01061;mir-548;AANU01270843.1/85523-85605 9544:Macaca mulatta
(rhesus monkey)
Length = 83
Score = 67.9 bits (34), Expect = 3e-11
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 16 tatcaggttggtgcaaaagtaattgcggttttgcaattaaacagtagtggnnaaaatctc 75
||||||||||||||||||||||||| |||||||||| |||| |||| | | |||| | |
Sbjct: 1 tatcaggttggtgcaaaagtaattgtggttttgcaactaaa-agtaattgcaaaaaccgc 59
Query: 76 aattatttttgcatcaacct 95
||||| ||||||| ||||||
Sbjct: 60 aattacttttgcagcaacct 79
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 16 tatcaggttggtgcaaaagtaattgcggtttt 47
|||||||||| |||||||||||||||||||||
Sbjct: 83 tatcaggttgctgcaaaagtaattgcggtttt 52
>RF01061;mir-548;AC202678.6/146907-146824 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 16 tatcaggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||||||||
Sbjct: 1 tatcaggttggtgcaaaagtaattgcggtttt 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 22 gttggtgcaaaagtaattgcggt 44
|||||||||||||||||||||||
Sbjct: 78 gttggtgcaaaagtaattgcggt 56
>RF01061;mir-548;AADD01036043.1/27192-27275 9606:Homo sapiens
(human)
Length = 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggttttg 48
|||||||||||||||||||||||||||||
Sbjct: 80 aggttggtgcaaaagtaattgcggttttg 52
Score = 48.1 bits (24), Expect = 2e-05
Identities = 66/78 (84%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggttttg-caattaaacagtagtggnnaaaatctcaat 78
||||| |||||||||||||||| |||||| |||||| |||||||| |||| | ||||
Sbjct: 5 aggttagtgcaaaagtaattgcagttttgttcattaaa-agtagtggccaaaaccgcaat 63
Query: 79 tatttttgcatcaaccta 96
|| ||||||| |||||||
Sbjct: 64 tacttttgcaccaaccta 81
>RF01061;mir-548;ABBA01068880.1/357-274 9606:Homo sapiens (human)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||||
Sbjct: 5 aggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;AC117444.6/85961-86044 9606:Homo sapiens (human)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||||
Sbjct: 80 aggttggtgcaaaagtaattgcggtttt 53
>RF01061;mir-548;AADC01102129.1/13137-13054 9606:Homo sapiens
(human)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||||
Sbjct: 80 aggttggtgcaaaagtaattgcggtttt 53
>RF01061;mir-548;ABSL01029623.1/494-577 9606:Homo sapiens (human)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||||
Sbjct: 5 aggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;CABD01089019.1/6160-6243 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||||
Sbjct: 5 aggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;CABD01688067.1/1028-1113 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 86
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||||
Sbjct: 82 aggttggtgcaaaagtaattgcggtttt 55
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 gttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||
Sbjct: 7 gttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;CABD01343912.1/1154-1071 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||||
Sbjct: 5 aggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;AANU01260291.1/17494-17411 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggttt-tgcaattaaacagtagtggnnaaaatctcaat 78
|||||||||||||| |||||| ||||| ||| |||||| |||| | | |||||| ||||
Sbjct: 5 aggttggtgcaaaaataattgtggtttctgccattaaa-agtaattgcaaaaatcgcaat 63
Query: 79 tatttttgcatcaaccta 96
|||||||||| |||||||
Sbjct: 64 tatttttgcaccaaccta 81
>RF01061;mir-548;AANU01285209.1/57947-57864 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||||
Sbjct: 80 aggttggtgcaaaagtaattgcggtttt 53
>RF01061;mir-548;AANU01170885.1/1-85 9544:Macaca mulatta (rhesus
monkey)
Length = 85
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||||
Sbjct: 5 aggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;AC074323.4/95680-95597 9606:Homo sapiens (human)
Length = 84
Score = 54.0 bits (27), Expect = 4e-07
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 23 ttggtgcaaaagtaattgcgg-ttttgcaattaaacagtagtggnnaaaatctcaattat 81
||||||||||||||||||||| |||||| |||||| |||| ||| |||| | ||||||
Sbjct: 8 ttggtgcaaaagtaattgcggtttttgccattaaa-agtaatggcaaaaaccgcaattac 66
Query: 82 ttttgcatcaacc 94
||||||| |||||
Sbjct: 67 ttttgcaccaacc 79
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 21 ggttggtgcaaaagtaattgcggtttt 47
|||||||||||||||||||||||||||
Sbjct: 79 ggttggtgcaaaagtaattgcggtttt 53
>RF01061;mir-548;AADC01117423.1/979850-979767 9606:Homo sapiens
(human)
Length = 84
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 21 ggttggtgcaaaagtaattgcggtttt 47
|||||||||||||||||||||||||||
Sbjct: 6 ggttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;CABD01009254.1/6580-6663 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 54.0 bits (27), Expect = 4e-07
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggttttgcaattaaacagtagtggnnaaaatctcaatt 79
||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||
Sbjct: 5 aggttggtgcaaaagtaattgtggttttggccttaaaaagtaatggtgaaaactgcaatt 64
Query: 80 atttttgcatcaaccta 96
| ||||||| |||||||
Sbjct: 65 acttttgcaccaaccta 81
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
|||||||||||||||||||||| |||||
Sbjct: 80 aggttggtgcaaaagtaattgcagtttt 53
>RF01061;mir-548;AANU01272376.1/8292-8209 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggttt 46
|||||||||||||||||||||||||||
Sbjct: 80 aggttggtgcaaaagtaattgcggttt 54
>RF01061;mir-548;AADC01015139.1/1187-1100 9606:Homo sapiens
(human)
Length = 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 gttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||
Sbjct: 7 gttggtgcaaaagtaattgcggtttt 32
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 22 gttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||
Sbjct: 82 gttggtgcaaaagtaattgcggtttt 57
>RF01061;mir-548;AADC01144176.1/293955-294038 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtt 45
||||||||||||||||||||||||||
Sbjct: 5 aggttggtgcaaaagtaattgcggtt 30
>RF01061;mir-548;CABD01001244.1/12488-12571 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcgg-ttttgcaattaaa 56
|||||||||||||||||||||||| |||||| ||||||
Sbjct: 5 aggttggtgcaaaagtaattgcggattttgccattaaa 42
>RF01061;mir-548;CABD01085041.1/3135-3052 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 gttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||||
Sbjct: 7 gttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;ABGA01258901.1/11428-11345 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggttttg 48
|||||||||||||||||||||| ||||||
Sbjct: 80 aggttggtgcaaaagtaattgcagttttg 52
>RF01061;mir-548;AADC01066816.1/395993-395910 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggttttg 48
|||||||||| ||||||||||||||||||
Sbjct: 5 aggttggtgctaaagtaattgcggttttg 33
>RF01061;mir-548;ABSL01073318.1/15548-15465 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 23 ttggtgcaaaagtaattgcggtttt 47
|||||||||||||||||||||||||
Sbjct: 8 ttggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;ABGA01354861.1/8138-8055 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||| ||||||
Sbjct: 5 aggttggtgcaaaagtaattgtggtttt 32
>RF01061;mir-548;ABGA01086348.1/10388-10471 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||| ||||||||||||||
Sbjct: 5 aggttggtgcaaatgtaattgcggtttt 32
>RF01061;mir-548;ABGA01380877.1/47446-47363 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
|||||||||||||||||||||| |||||
Sbjct: 80 aggttggtgcaaaagtaattgcagtttt 53
>RF01061;mir-548;ABGA01320162.1/292-375 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||| ||||||||
Sbjct: 80 aggttggtgcaaaagtaatagcggtttt 53
>RF01061;mir-548;ABGA01209240.1/4651-4734 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
|||||||||||||||||||||| |||||
Sbjct: 80 aggttggtgcaaaagtaattgcagtttt 53
>RF01061;mir-548;AACZ02022871.1/5823-5909 9598:Pan troglodytes
(chimpanzee)
Length = 87
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||| ||||||||||||
Sbjct: 5 aggttggtgcaaaagcaattgcggtttt 32
>RF01061;mir-548;AACZ02112099.1/25061-25144 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||| ||||||
Sbjct: 5 aggttggtgcaaaagtaattgtggtttt 32
>RF01061;mir-548;AACZ02147953.1/7033-7116 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||| ||||||
Sbjct: 5 aggttggtgcaaaagtaattgtggtttt 32
>RF01061;mir-548;AC111199.4/17434-17350 9606:Homo sapiens (human)
Length = 85
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
|||||| |||||||||||||||||||||
Sbjct: 80 aggttgatgcaaaagtaattgcggtttt 53
>RF01061;mir-548;AL160056.16/43591-43674 9606:Homo sapiens (human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
|||||||||||| |||||||||||||||
Sbjct: 5 aggttggtgcaagagtaattgcggtttt 32
>RF01061;mir-548;AC011709.11/112131-112214 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 16 tatcaggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||| ||||| ||||||||
Sbjct: 1 tatcaggttggtgcaaatgtaatggcggtttt 32
>RF01061;mir-548;AC104441.2/115021-115102 9606:Homo sapiens
(human)
Length = 82
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||| ||||||||||||||||
Sbjct: 5 aggttggtgcagaagtaattgcggtttt 32
>RF01061;mir-548;AADC01134614.1/198131-198048 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 16 tatcaggttggtgcaaaagtaattgcggtttt 47
|||||||||||||||||||||| ||| |||||
Sbjct: 1 tatcaggttggtgcaaaagtaaatgcagtttt 32
>RF01061;mir-548;AADB02011926.1/1109567-1109484 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||| ||||
Sbjct: 5 aggttggtgcaaaagtaattgcgttttt 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
|||||||||||||||||| |||||||||
Sbjct: 80 aggttggtgcaaaagtaactgcggtttt 53
>RF01061;mir-548;AADC01126060.1/253363-253446 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 tggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||
Sbjct: 9 tggtgcaaaagtaattgcggtttt 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 24 tggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||
Sbjct: 76 tggtgcaaaagtaattgcggtttt 53
>RF01061;mir-548;AL023583.25/57094-57177 9606:Homo sapiens (human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||| ||||||||||
Sbjct: 80 aggttggtgcaaaagtagttgcggtttt 53
>RF01061;mir-548;AADB02010442.1/1775967-1775884 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
|||||| |||||||||||||||||||||
Sbjct: 5 aggttgttgcaaaagtaattgcggtttt 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
|||||| |||||||||||||||||||||
Sbjct: 80 aggttgttgcaaaagtaattgcggtttt 53
>RF01061;mir-548;ABSL01062835.1/19063-18980 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||| ||||||
Sbjct: 5 aggttggtgcaaaagtaattgtggtttt 32
>RF01061;mir-548;AADC01015752.1/126987-127070 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||| ||||||||||||||
Sbjct: 5 aggttggtgcaaatgtaattgcggtttt 32
>RF01061;mir-548;AADC01022461.1/57990-57907 9606:Homo sapiens
(human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcgg 43
||||||||||||||||||||||||
Sbjct: 80 aggttggtgcaaaagtaattgcgg 57
>RF01061;mir-548;AP001729.1/31449-31355 9606:Homo sapiens (human)
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||| ||||||||||||||||||||
Sbjct: 5 aggttggcgcaaaagtaattgcggtttt 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||| ||||||||||||||||||||
Sbjct: 91 aggttggcgcaaaagtaattgcggtttt 64
>RF01061;mir-548;AC126755.3/45-128 9606:Homo sapiens (human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 19 caggttggtgcaaaagtaattgcggttt 46
||||||||||||||||| ||||||||||
Sbjct: 81 caggttggtgcaaaagtgattgcggttt 54
>RF01061;mir-548;CABD01117548.1/2434-2351 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 24 tggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||
Sbjct: 76 tggtgcaaaagtaattgcggtttt 53
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/69 (85%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 21 ggttggtgcaaaagtaattgcggtt-ttgcaattaaacagtagtggnnaaaatctcaatt 79
||||||||||||||||||||| ||| | ||||||||| |||||| | |||| | |||||
Sbjct: 6 ggttggtgcaaaagtaattgcagttctggcaattaaa-agtagttgcaaaaaccgcaatt 64
Query: 80 atttttgca 88
| |||||||
Sbjct: 65 acttttgca 73
>RF01061;mir-548;CABD01355261.2/2635-2552 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||| ||||||||||||||||||||
Sbjct: 5 aggttggagcaaaagtaattgcggtttt 32
>RF01061;mir-548;CABD01524054.2/315-398 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
|||||| |||||||||||||||||||||
Sbjct: 5 aggttgttgcaaaagtaattgcggtttt 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||| ||||||||||||
Sbjct: 80 aggttggtgcaaaagaaattgcggtttt 53
>RF01061;mir-548;CABD01149968.2/8500-8417 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
|||||||||||||||||| |||||||||
Sbjct: 80 aggttggtgcaaaagtaactgcggtttt 53
>RF01061;mir-548;CABD01558585.2/283-366 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||| ||||||||
Sbjct: 5 aggttggtgcaaaagtaatggcggtttt 32
>RF01061;mir-548;CABD01346604.1/3997-4080 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
|||||||||||||||||| |||||||||
Sbjct: 80 aggttggtgcaaaagtaagtgcggtttt 53
>RF01061;mir-548;AC198186.3/82008-82091 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 tggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||
Sbjct: 9 tggtgcaaaagtaattgcggtttt 32
>RF01061;mir-548;AANU01290519.1/8633-8716 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||| ||||||
Sbjct: 5 aggttggtgcaaaagtaattgtggtttt 32
>RF01061;mir-548;AANU01296214.1/2804-2721 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcgg 43
||||||||||||||||||||||||
Sbjct: 5 aggttggtgcaaaagtaattgcgg 28
>RF01061;mir-548;AANU01261834.1/7167-7084 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||| ||||||||||
Sbjct: 80 aggttggtgcaaaagtagttgcggtttt 53
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggttt 46
||||||||||||||||||||| |||||
Sbjct: 5 aggttggtgcaaaagtaattgtggttt 31
>RF01061;mir-548;AANU01106767.1/8226-8143 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 24 tggtgcaaaagtaattgcggtttt 47
||||||||||||||||||||||||
Sbjct: 76 tggtgcaaaagtaattgcggtttt 53
>RF01061;mir-548;AANU01236941.1/3584-3501 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggtttt 47
||||||||||||||| ||||||||||||
Sbjct: 80 aggttggtgcaaaagcaattgcggtttt 53
>RF01061;mir-548;AACZ02184973.1/13727-13644 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 21 ggttggtgcaaaagtaattgcggtttt 47
||||||||||||||||| |||||||||
Sbjct: 79 ggttggtgcaaaagtaactgcggtttt 53
>RF01061;mir-548;AADD01165731.1/6332-6415 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggttt 46
||||||||||||||||||||| |||||
Sbjct: 5 aggttggtgcaaaagtaattgtggttt 31
>RF01061;mir-548;AC121493.1/11246-11329 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggttt 46
||||||||||||||||||||| |||||
Sbjct: 80 aggttggtgcaaaagtaattgtggttt 54
>RF01061;mir-548;CABD01078688.1/32-114 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgcggttttgcaatta 54
||||||||||||||||||| || ||||||| ||||
Sbjct: 79 aggttggtgcaaaagtaatcgcagttttgccatta 45
>RF01061;mir-548;AANU01115116.1/14393-14310 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgc-ggttttgc 49
|||||||||||||||||||||| ||||||||
Sbjct: 5 aggttggtgcaaaagtaattgcaggttttgc 35
>RF01061;mir-548;AACZ02123200.1/20871-20786 9598:Pan troglodytes
(chimpanzee)
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgc 41
||||||||||||||||||||||
Sbjct: 82 aggttggtgcaaaagtaattgc 61
>RF01061;mir-548;AL008721.1/97595-97678 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgc 41
||||||||||||||||||||||
Sbjct: 5 aggttggtgcaaaagtaattgc 26
>RF01061;mir-548;AADB02016080.1/5738062-5737979 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgc 41
||||||||||||||||||||||
Sbjct: 5 aggttggtgcaaaagtaattgc 26
>RF01061;mir-548;CABD01214541.1/743-661 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 83
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggttttgc 49
|||||||||||||||| ||||| |||||||
Sbjct: 5 aggttggtgcaaaagtcattgcagttttgc 34
>RF01061;mir-548;CABD01386540.1/401-318 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgc 41
||||||||||||||||||||||
Sbjct: 80 aggttggtgcaaaagtaattgc 59
>RF01061;mir-548;CABD01007255.1/6013-6096 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 gttggtgcaaaagtaattgcggtttt 47
|||||||||||||||||| |||||||
Sbjct: 78 gttggtgcaaaagtaattacggtttt 53
>RF01061;mir-548;CABD01319512.1/496-413 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtt 45
||||| ||||||||||||||||||||
Sbjct: 5 aggtttgtgcaaaagtaattgcggtt 30
>RF01061;mir-548;AANU01015630.1/1898-1815 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 20 aggttggtgcaaaagtaattgc 41
||||||||||||||||||||||
Sbjct: 80 aggttggtgcaaaagtaattgc 59
>RF01061;mir-548;AANU01124258.1/9508-9425 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 aggttggtgcaaaagtaattgcggtt 45
||||||||||||||||||||| ||||
Sbjct: 5 aggttggtgcaaaagtaattgtggtt 30
