miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 69.9 bits (35), Expect = 4e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagatcttttaaagattttactata 52
|||||||||||||||||||||||||| |||||| ||||| |||||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagattgtactata 47
Score = 50.1 bits (25), Expect = 4e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagatctttta 38
||||||||||||||| |||||||||| ||||||
Sbjct: 163 tactccctccgttccaaaatataagacctttta 131
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 166
Score = 69.9 bits (35), Expect = 4e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagatcttttaaagattttactata 52
|||||||||||||||||||||||||| |||||| ||||| |||||||
Sbjct: 4 tactccctccgttcctaaatataagaccttttagagattgtactata 50
Score = 50.1 bits (25), Expect = 4e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagatctttta 38
||||||||||||||| |||||||||| ||||||
Sbjct: 166 tactccctccgttccaaaatataagacctttta 134
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 63.9 bits (32), Expect = 2e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagatcttttaaagattttactatag 53
|||||||||||||||||||||||||| |||||| | |||| |||||||
Sbjct: 163 tactccctccgttcctaaatataagaccttttacaaatttcactatag 116
Score = 61.9 bits (31), Expect = 9e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagatcttttaaagattttactata 52
|||||||||||||||||||||||||| |||||| |||| | ||||||
Sbjct: 2 tactccctccgttcctaaatataagaccttttagagatctcactata 48
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 60.0 bits (30), Expect = 4e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagatcttttaaagattttactat 51
|||||||||||||||||||||||||| |||||| | ||| ||||||
Sbjct: 5 tactccctccgttcctaaatataagaccttttagaaattctactat 50
Score = 58.0 bits (29), Expect = 1e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagatctttta 38
|||||||||||||||||||||||||| ||||||
Sbjct: 166 tactccctccgttcctaaatataagacctttta 134
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 58.0 bits (29), Expect = 1e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 gaattactccctccgttcctaaatataag 30
|||||||||||||||||||||||||||||
Sbjct: 1 gaattactccctccgttcctaaatataag 29
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 161 tactccctccgttcctaaatataag 137
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 52.0 bits (26), Expect = 9e-07
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagatcttttaa 39
||||||||||||||||||||||||| ||||||||
Sbjct: 151 tactccctccgttcctaaatataag-tcttttaa 119
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 165
Score = 52.0 bits (26), Expect = 9e-07
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagatcttttaa 39
||||||||||||||||||||||||| ||||||||
Sbjct: 1 tactccctccgttcctaaatataag-tcttttaa 33
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 164 tactccctccgttcctaaatataag 140
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 52.0 bits (26), Expect = 9e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataaga 31
||||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataaga 51
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
||||||||| |||||||||||||||
Sbjct: 5 tactccctctgttcctaaatataag 29
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum
(bread wheat)
Length = 167
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatataag 26
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||| ||||||||||||||
Sbjct: 163 tactccctccattcctaaatataag 139
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataag 141
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
Score = 46.1 bits (23), Expect = 6e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 10 ccctccgttcctaaatataagatcttttaaagatt 44
||||||||||||||||||||| |||||| |||||
Sbjct: 111 ccctccgttcctaaatataagtccttttagagatt 77
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataag 141
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||| ||||
Sbjct: 3 tactccctccgttcctaaatgtaag 27
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataag 114
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataag 25
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 164 tactccctccgttcctaaatataag 140
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 166 tactccctccgttcctaaatataag 142
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
||||||||| |||||||||||||||
Sbjct: 5 tactccctctgttcctaaatataag 29
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa Japonica
Group
Length = 121
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 3 aattactccctccgttcctaaatataaga 31
||||||||||||||| |||||||||||||
Sbjct: 120 aattactccctccgtccctaaatataaga 92
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgttcctaaatataag 29
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 actccctccgttcctaaatataaga 31
|||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataaga 30
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataa 29
||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 ttactccctccgttcctaaatat 27
|||||||||||||||||||||||
Sbjct: 1 ttactccctccgttcctaaatat 23
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 ttactccctccgttcctaaatat 27
|||||||||||||||||||||||
Sbjct: 1 ttactccctccgttcctaaatat 23
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 ttactccctccgttcctaaatat 27
|||||||||||||||||||||||
Sbjct: 1 ttactccctccgttcctaaatat 23
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatata 28
|||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67
>RF00906;MIR1122;DQ454157.1/29550-29395 39947:Oryza sativa Japonica
Group
Length = 156
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 5 ttactccctccgttcctaaatataaga 31
||||||||||||| |||||||||||||
Sbjct: 153 ttactccctccgtccctaaatataaga 127
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 attactccctccgttcctaaatataag 30
|||||||||||||| ||||||||||||
Sbjct: 154 attactccctccgtccctaaatataag 128
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01001639.1/6893-7021 39947:Oryza sativa
Japonica Group
Length = 129
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 5 ttactccctccgttcctaaatataaga 31
||||||||||||| |||||||||||||
Sbjct: 126 ttactccctccgtccctaaatataaga 100
>RF00906;MIR1122;AAAA02002822.1/13589-13717 39946:Oryza sativa
Indica Group
Length = 129
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 5 ttactccctccgttcctaaatataaga 31
||||||||||||| |||||||||||||
Sbjct: 126 ttactccctccgtccctaaatataaga 100
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatata 28
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatata 27
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatat 217
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatat 27
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 44.1 bits (22), Expect = 2e-04
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagatcttt-taaagattttacta 50
|||||||||| |||||||||||||| ||||| ||||||||| ||||
Sbjct: 5 tactccctcctttcctaaatataag-tctttctaaagatttcacta 49
>RF00906;MIR1122;AAAA02004745.1/46871-46769 39946:Oryza sativa
Indica Group
Length = 103
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 ccctccgttcctaaatataaga 31
||||||||||||||||||||||
Sbjct: 95 ccctccgttcctaaatataaga 74
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataaga 31
|||||||||||| |||||||||||||
Sbjct: 127 tactccctccgtccctaaatataaga 102
>RF00906;MIR1122;AAAA02001165.1/17166-17008 39946:Oryza sativa
Indica Group
Length = 159
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataaga 31
|||||||||||| |||||||||||||
Sbjct: 155 tactccctccgtccctaaatataaga 130
>RF00906;MIR1122;AL713908.3/140004-139874 4530:Oryza sativa (rice)
Length = 131
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataaga 31
|||||||||||| |||||||||||||
Sbjct: 127 tactccctccgtccctaaatataaga 102
>RF00906;MIR1122;AACV01019437.1/5367-5506 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataaga 31
|||||||||||| |||||||||||||
Sbjct: 136 tactccctccgtccctaaatataaga 111
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataaga 31
|||||||||||| |||||||||||||
Sbjct: 127 tactccctccgtccctaaatataaga 102
>RF01058;MIR806;AAAA02029566.1/13003-12764 39946:Oryza sativa
Indica Group
Length = 240
Score = 42.1 bits (21), Expect = 9e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 actccctccgttcctaaatat 27
|||||||||||||||||||||
Sbjct: 3 actccctccgttcctaaatat 23
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
||||||||||||||| |||||||||
Sbjct: 118 tactccctccgttccaaaatataag 94
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
||||||||||||||| |||||||||
Sbjct: 153 tactccctccgttccaaaatataag 129
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
||||||||||||||| |||||||||
Sbjct: 5 tactccctccgttccaaaatataag 29
>RF00906;MIR1122;CT030168.3/87017-87173 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttctaaatataag 29
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
||||||||||||| |||||||||||
Sbjct: 153 tactccctccgtttctaaatataag 129
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
||||||||||||||| |||||||||
Sbjct: 151 tactccctccgttccaaaatataag 127
>RF00906;MIR1122;ABXC01000869.1/217-331 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 42.1 bits (21), Expect = 9e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 3 aattactccctccgttcctaaatataaga 31
|||||||||||||||||| || |||||||
Sbjct: 114 aattactccctccgttccaaattataaga 86
>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 42.1 bits (21), Expect = 9e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaata 26
|||||||||||||||||||||
Sbjct: 100 tactccctccgttcctaaata 80
>RF00906;MIR1122;EU730901.1/155966-155873 15368:Brachypodium
distachyon
Length = 94
Score = 42.1 bits (21), Expect = 9e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaata 26
|||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaata 25
>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
distachyon
Length = 94
Score = 42.1 bits (21), Expect = 9e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaata 26
|||||||||||||||||||||
Sbjct: 90 tactccctccgttcctaaata 70
>RF00906;MIR1122;EU730896.1/84586-84679 15368:Brachypodium
distachyon
Length = 94
Score = 42.1 bits (21), Expect = 9e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaata 26
|||||||||||||||||||||
Sbjct: 90 tactccctccgttcctaaata 70
>RF00906;MIR1122;AACV01003381.1/5259-5104 39947:Oryza sativa
Japonica Group
Length = 156
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02005173.1/305-150 39946:Oryza sativa Indica
Group
Length = 156
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 152 tactccctccgtccctaaatataag 128
>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa Japonica
Group
Length = 110
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 106 tactccctccgtccctaaatataag 82
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 152 tactccctccgtccctaaatataag 128
>RF00906;MIR1122;AAAA02035149.1/48296-48436 39946:Oryza sativa
Indica Group
Length = 141
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 137 tactccctccgtccctaaatataag 113
>RF00906;MIR1122;AAAA02028211.1/1243-1359 39946:Oryza sativa
Indica Group
Length = 117
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 111 tactccctccgtccctaaatataag 87
>RF00906;MIR1122;AACV01007836.1/7963-7867 39947:Oryza sativa
Japonica Group
Length = 97
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 93 tactccctccgtccctaaatataag 69
>RF00906;MIR1122;AC136448.2/118247-118097 39947:Oryza sativa
Japonica Group
Length = 151
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02000609.1/11944-11814 39946:Oryza sativa
Indica Group
Length = 131
Score = 42.1 bits (21), Expect = 9e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 9 tccctccgttcctaaatataagatctttt 37
||||||||| |||||||||||||| ||||
Sbjct: 8 tccctccgtccctaaatataagatatttt 36
>RF00906;MIR1122;AP005896.3/119867-120022 39947:Oryza sativa
Japonica Group
Length = 156
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01005168.1/9233-9388 39947:Oryza sativa
Japonica Group
Length = 156
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01023423.1/18495-18379 39947:Oryza sativa
Japonica Group
Length = 117
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa
Japonica Group
Length = 156
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01008227.1/1-122 39947:Oryza sativa Japonica
Group
Length = 122
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 attactccctccgttcctaaatata 28
||||||||||||||||| |||||||
Sbjct: 1 attactccctccgttccaaaatata 25
>RF00906;MIR1122;AACV01013612.1/22689-22534 39947:Oryza sativa
Japonica Group
Length = 156
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 152 tactccctccgtccctaaatataag 128
>RF00906;MIR1122;AAAA02034091.1/42794-42914 39946:Oryza sativa
Indica Group
Length = 121
Score = 42.1 bits (21), Expect = 9e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 3 aattactccctccgttcctaaatataaga 31
||||||||||||| |||| ||||||||||
Sbjct: 120 aattactccctccattccaaaatataaga 92
>RF00906;MIR1122;AP008217.1/6469174-6469304 39947:Oryza sativa
Japonica Group
Length = 131
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 127 tactccctccgtccctaaatataag 103
>RF00906;MIR1122;AC120985.3/48011-47950 39947:Oryza sativa
Japonica Group
Length = 62
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 58 tactccctccgtccctaaatataag 34
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 130 tactccctccgtccctaaatataag 106
>RF00906;MIR1122;AP004178.3/74526-74681 39947:Oryza sativa
Japonica Group
Length = 156
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa
Indica Group
Length = 156
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01000871.1/13756-13601 39947:Oryza sativa
Japonica Group
Length = 156
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 152 tactccctccgtccctaaatataag 128
>RF00906;MIR1122;AAAA02019543.1/35421-35577 39946:Oryza sativa
Indica Group
Length = 157
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 153 tactccctccgtccctaaatataag 129
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
||||| |||||||||||||||||||
Sbjct: 146 tactcactccgttcctaaatataag 122
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 117 tactccctccgtccctaaatataag 93
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
||||||||||||||| |||||||||
Sbjct: 91 tactccctccgttccaaaatataag 67
>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
Japonica Group
Length = 157
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01007572.1/20450-20296 39947:Oryza sativa
Japonica Group
Length = 155
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 151 tactccctccgtccctaaatataag 127
>RF00906;MIR1122;AP008207.1/11769320-11769475 39947:Oryza sativa
Japonica Group
Length = 156
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 153 tactccctccgtccctaaatataag 129
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa
Japonica Group
Length = 132
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtccctaaatataag 29
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 128 tactccctccgtccctaaatataag 104
>RF00906;MIR1122;AC087851.4/84630-84468 4530:Oryza sativa (rice)
Length = 163
Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 159 tactccctccgtccctaaatataag 135
