miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00051;mir-17;AAPN01018584.1/1527-1606 9258:Ornithorhynchus
anatinus (platypus)
Length = 80
Score = 97.6 bits (49), Expect = 2e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 13 tggtaatgctagaagcgcttccattgcagtaggtacaagaagcta-ctgcactgtaagca 71
||||||||||||||| |||| ||||||||||||||| | |||||| ||||||||||||||
Sbjct: 77 tggtaatgctagaagtgcttacattgcagtaggtactaaaagctacctgcactgtaagca 18
Query: 72 cttttgcacaacc 84
|||||||||||||
Sbjct: 17 cttttgcacaacc 5
>RF00051;mir-17;ABQF01018395.1/1087-1166 59729:Taeniopygia guttata
Length = 80
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 58 ctgcactgtaagcacttttgcacaac 83
||||||||||||||||||||||||||
Sbjct: 31 ctgcactgtaagcacttttgcacaac 6
>RF00051;mir-17;AADN02013295.1/455-376 9031:Gallus gallus
(chicken)
Length = 80
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 58 ctgcactgtaagcacttttgcacaac 83
||||||||||||||||||||||||||
Sbjct: 31 ctgcactgtaagcacttttgcacaac 6
