miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 131 bits (66), Expect = 3e-30
Identities = 81/86 (94%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||||||||||||||||||||||||| ||||||||| |||| |||||||||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 96 cttatattagtttacagagggagtaa 121
||||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagtaa 4
Score = 101 bits (51), Expect = 3e-21
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||| |||||||||||||||| | |||||||||||| |||| |||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 96 cttatattagtttacagagggagtaac 122
||||||||||||||| |||||||||||
Sbjct: 65 cttatattagtttacggagggagtaac 91
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 129 bits (65), Expect = 1e-29
Identities = 80/85 (94%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||| |||||||||||||||| || ||||||||||||||||||||||||| | ||
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 96 cttatattagtttacagagggagta 120
|||||||||||||||||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
Score = 105 bits (53), Expect = 2e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||| |||||||||||||||| || ||||||||||| ||||||||||| | ||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgct 30
Query: 96 cttatattagtttacagagggagta 120
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 129 bits (65), Expect = 1e-29
Identities = 80/85 (94%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 96 cttatattagtttacagagggagta 120
|||||||| ||||| ||||||||||
Sbjct: 29 cttatattggtttatagagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 33 atgtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaac 92
|||||||||||| ||||| ||||||||| ||||||||||||| ||||| |||||||
Sbjct: 2 atgtactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaac 61
Query: 93 actcttatattagtttacagagggagta 120
||||||||||||||||| |||||||||
Sbjct: 62 gctcttatattagtttacggagggagta 89
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 127 bits (64), Expect = 5e-29
Identities = 70/72 (97%)
Strand = Plus / Minus
Query: 49 aactaatataagatcgtttagatcactactttagtgatctaaacactcttatattagttt 108
||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17
Query: 109 acagagggagta 120
||||||||||||
Sbjct: 16 acagagggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 77/85 (90%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64
Query: 96 cttatattagtttacagagggagta 120
|||||||||||| ||| ||||||||
Sbjct: 65 cttatattagttcaca-agggagta 88
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 121 bits (61), Expect = 3e-27
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||| ||
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 96 cttatattagtttacagagggagta 120
|||||| ||||||||||| ||||||
Sbjct: 65 cttatagtagtttacagacggagta 89
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||||| || |||||||| ||||||| |||||||||||||| |||| |||||||| ||
Sbjct: 89 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 30
Query: 96 cttatattagtttacagagggagta 120
||||||||| ||||| |||||||||
Sbjct: 29 cttatattaatttacggagggagta 5
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 119 bits (60), Expect = 1e-26
Identities = 78/84 (92%)
Strand = Plus / Minus
Query: 34 tgtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaaca 93
||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 91 tgtactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaag 32
Query: 94 ctcttatattagtttacagaggga 117
|||||||||||||||||||||||
Sbjct: 31 gtcttatattagtttacagaggga 8
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 39 tccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacactctt 98
|||||| |||||||||||||||| | |||||||||||| |||||||||||| ||||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 67
Query: 99 atattagtttacagagggagta 120
||||||||||||||||||||||
Sbjct: 68 atattagtttacagagggagta 89
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 119 bits (60), Expect = 1e-26
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 41 cctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacactcttat 100
||||||||||||||||||||| |||||||||||||| |||||||||| |||| |||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 101 attagtttacagagggagta 120
|||| |||||||||||||||
Sbjct: 24 attaatttacagagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||| ||||| |||||||||| ||||| |||||||| ||||||||||||| ||
Sbjct: 5 tactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgct 64
Query: 96 cttatattagtttacagagg 115
||||||||||||||| ||||
Sbjct: 65 cttatattagtttacggagg 84
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 117 bits (59), Expect = 5e-26
Identities = 80/86 (93%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
||||||||||||||||||||||||| | |||||||| |||| |||||| ||||||||||
Sbjct: 88 gtactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacac 31
Query: 95 tcttatattagtttacagagggagta 120
||||||||||||||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
|||||||||| |||||||||||||||| |||||||| |||| |||| ||||||| |
Sbjct: 4 gtactccctctgtaaactaatataagagtgtttagataactaaaatagt--tctaaacgc 61
Query: 95 tcttatattagtttacagagggagta 120
| |||||||||||||| |||||||||
Sbjct: 62 tattatattagtttacggagggagta 87
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 117 bits (59), Expect = 5e-26
Identities = 80/86 (93%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
||||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||
Sbjct: 88 gtactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacac 31
Query: 95 tcttatattagtttacagagggagta 120
| ||||||||||||||||||||||||
Sbjct: 30 ttttatattagtttacagagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
|||||||||| |||||||||||||| | |||||||| |||| |||| ||||||| |
Sbjct: 4 gtactccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgc 61
Query: 95 tcttatattagtttacagagggagta 120
|||||||||||||||| |||||||||
Sbjct: 62 tcttatattagtttacggagggagta 87
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 115 bits (58), Expect = 2e-25
Identities = 79/86 (91%)
Strand = Plus / Plus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
|||||||||| |||||||||||||||| |||||||||||||| |||||| ||||||| |
Sbjct: 4 gtactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgc 63
Query: 95 tcttatattagtttacagagggagta 120
|||||||||||||||| |||||||||
Sbjct: 64 tcttatattagtttacggagggagta 89
Score = 113 bits (57), Expect = 7e-25
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||||||||||||||||||||||||| |||||||| |||| ||||||||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 96 cttatattagtttacagagggagta 120
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 113 bits (57), Expect = 7e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
|||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||| |
Sbjct: 4 gtactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgc 63
Query: 95 tcttatattagtttacagagggagt 119
|||||||||||||||| ||||||||
Sbjct: 64 tcttatattagtttactgagggagt 88
Score = 103 bits (52), Expect = 7e-22
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 37 actccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacactc 96
|||||||| |||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 97 ttatattagtttacagagggagta 120
|||||||| ||||| |||||||||
Sbjct: 28 ttatattaatttacggagggagta 5
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 113 bits (57), Expect = 7e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 96 cttatattagtttacagagggagta 120
||||||||||||||||||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
Score = 103 bits (52), Expect = 7e-22
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 34 tgtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaaca 93
||||||||||| |||||||||||||| | | |||||||||||| |||| |||||||||
Sbjct: 91 tgtactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaaca 32
Query: 94 ctcttatattagtttacagagggagtaa 121
||||||||||||||||| ||||||||||
Sbjct: 31 ctcttatattagtttacggagggagtaa 4
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 107 bits (54), Expect = 4e-23
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| |
Sbjct: 4 gtactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgc 63
Query: 95 tcttatattagtttacagagggagta 120
||||||||||||||||||||| ||||
Sbjct: 64 tcttatattagtttacagaggaagta 89
Score = 105 bits (53), Expect = 2e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||| |||| |||||||||||||||| | |||||||||||| |||||||| |||||| ||
Sbjct: 89 tacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgct 30
Query: 96 cttatattagtttacagagggagta 120
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 107 bits (54), Expect = 4e-23
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
|||||||||| |||||||||||||||| ||||||||||||| |||||| || |||| ||
Sbjct: 4 gtactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaac 63
Query: 95 tcttatattagtttacagagggagta 120
| ||||||||||||||||||||||||
Sbjct: 64 ttttatattagtttacagagggagta 89
Score = 89.7 bits (45), Expect = 1e-17
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||| |||||||||||||| | |||| || |||| ||||||||||||||||
Sbjct: 89 tactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacact 30
Query: 96 cttatattagtttacagagggagta 120
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 107 bits (54), Expect = 4e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
|||||||| | |||||||||||||| | | |||||| |||||||||||| |||||||| |
Sbjct: 90 gtactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgc 31
Query: 95 tcttatattagtttacagagggagta 120
||||||||||||||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||| |||||||||||||||| ||||||||| |||| ||||| |||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 96 cttatattagtttacagagggagta 120
|||||||||||||||| |||||||
Sbjct: 65 tttatattagtttacagggggagta 89
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 107 bits (54), Expect = 4e-23
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 39 tccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacactctt 98
||||| ||||||||||||||||| | |||||| ||||| |||||| ||||||| ||||||
Sbjct: 86 tcccttcgtaaactaatataagagcatttagaacactattttagtaatctaaatactctt 27
Query: 99 atattagtttacagagggagta 120
||||||||||||||||||||||
Sbjct: 26 atattagtttacagagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 33 atgtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaac 92
|||||||||||| |||||||||||||||| ||||||| |||| ||||| ||||||
Sbjct: 2 atgtactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaat 61
Query: 93 actcttatattagtttac 110
|||||||||||||||||
Sbjct: 62 gctcttatattagtttac 79
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 105 bits (53), Expect = 2e-22
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||||||||||||||||||||||||| ||||||||||||| |||| |||| |||| ||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 96 cttatattagtttacagagggagta 120
||||||||||||||| |||||||||
Sbjct: 65 cttatattagtttaccgagggagta 89
Score = 97.6 bits (49), Expect = 4e-20
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||| |||||||||||||||| | |||| |||| || ||||||||||||||||
Sbjct: 89 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 30
Query: 96 cttatattagtttacagagggagta 120
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 105 bits (53), Expect = 2e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||| |||||||||||||||| |||||||||||||| |||||| ||||||| ||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 96 cttatattagtttacagagggagta 120
|||||||||||||| |||||||||
Sbjct: 29 tttatattagtttacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
||||||||||||||||||||||||| | |||||||| |||| |||||||||||||
Sbjct: 4 gtactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgt 63
Query: 95 tcttatattagtttacagagggagtaa 121
|||||||||||||||||||||||||||
Sbjct: 64 tcttatattagtttacagagggagtaa 90
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 103 bits (52), Expect = 7e-22
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||||||||||||||||||||||||| | ||||||||||||| ||||||||||||| ||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcactac-ttagtgatctaaatgct 29
Query: 96 cttatattagtttacagagg 115
|||||||||||||||||||
Sbjct: 28 tttatattagtttacagagg 9
Score = 71.9 bits (36), Expect = 2e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 41 cctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacactcttat 100
|||| |||||||||||||| | | |||||||||||| | ||||||||||| |||||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcactaagt-agtgatctaaatgctcttat 67
Query: 101 attagtttacagagggagta 120
|||||||||| |||||||||
Sbjct: 68 attagtttacggagggagta 87
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 101 bits (51), Expect = 3e-21
Identities = 78/86 (90%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 34 tgtactccctccgtaaactaatataagatcgtttagatcactact--ttagtgatctaaa 91
||||||||||| |||||||||||||||| | |||||||||||||| |||||||||||||
Sbjct: 93 tgtactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaa 34
Query: 92 cactcttatattagtttacagaggga 117
|||||||||||||||||||||||
Sbjct: 33 aggtcttatattagtttacagaggga 8
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/84 (88%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 39 tccctccgtaaactaatataagatcgtttagatcactactt--tagtgatctaaacactc 96
|||||| |||||||||||||||| | |||||||||||| | |||||||||||| ||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtc 67
Query: 97 ttatattagtttacagagggagta 120
||||||||||||||||||||||||
Sbjct: 68 ttatattagtttacagagggagta 91
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 101 bits (51), Expect = 3e-21
Identities = 82/93 (88%), Gaps = 7/93 (7%)
Strand = Plus / Minus
Query: 35 gtactccctccgtaaactaatataagatcgtttaga-------tcactactttagtgatc 87
||||||||||| ||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 97 gtactccctccttaaactaatataagagcgtttagactttagatcactactttagtgatc 38
Query: 88 taaacactcttatattagtttacagagggagta 120
|||| |||||||||||||||||||||||||||
Sbjct: 37 taaaagctcttatattagtttacagagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaa 91
|||||||||| |||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 4 gtactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaa 60
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 99.6 bits (50), Expect = 1e-20
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||| |||||||||||||||| | || |||||||||||||||||||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgct 64
Query: 96 cttatattagtttacagagggagtaa 121
|||||||| ||||| ||||||||||
Sbjct: 65 cttatatttctttacggagggagtaa 90
Score = 89.7 bits (45), Expect = 1e-17
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||||||||| ||||||||| | |||||||||||| ||||||||| || ||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 96 cttatattagtttacagagggagta 120
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 97.6 bits (49), Expect = 4e-20
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 37 actccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacactc 96
||||||||||||||||||||||||| ||||||||||| | |||| |||||| ||| |||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 97 ttatattagtttacagaggga 117
||||||||||||||| |||||
Sbjct: 28 ttatattagtttacaaaggga 8
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 46 gtaaactaatataagatcgtttagatcactactttagtgatctaaacactcttatattag 105
|||||||||||||||| |||| |||||| || | ||||||||||| ||||||||||||
Sbjct: 15 gtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctcttatattag 74
Query: 106 tttacagagggagt 119
||||| ||||||||
Sbjct: 75 tttacggagggagt 88
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 50 actaatataagatcgtttagatcactactttagtgatctaaacactcttatattagttta 109
|||||||||||| |||||||||||||| |||| ||||||||| ||||||||||||||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 110 cagagggagta 120
| |||||||||
Sbjct: 124 cggagggagta 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||||||||||||||||||||||||| | ||||||||| || ||||||||||||| ||
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgct 75
Query: 96 cttatattagt 106
|||||||||||
Sbjct: 74 cttatattagt 64
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
|||||||||| |||||||||||||||| ||||||| ||| | |||| ||||||||||||
Sbjct: 4 gtactccctctgtaaactaatataagagcgtttaggtcataattttaatgatctaaacac 63
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 87 ctaaacactcttatattagtttacagagggagta 120
|||||| |||||||||||||||||||||||||||
Sbjct: 38 ctaaacgctcttatattagtttacagagggagta 5
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 46 gtaaactaatataagatcgtttagatcactactttagtgatctaaacactcttatatt 103
|||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 15 gtaaacaaatataagagcgtttagatcactactttagtgatctagacactcttatatt 72
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||| ||||| ||| ||||||||| || |||||||||| ||||||||||||| ||
Sbjct: 89 tactcactccgcaaagaaatataagagtgtctagatcactaaagtagtgatctaaacgct 30
Query: 96 cttatattagtttacagag 114
|||||||| ||||||||||
Sbjct: 29 cttatatttgtttacagag 11
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 91.7 bits (46), Expect = 3e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||||||||| ||||||||||||||| | |||||| |||||||| ||| ||||||| |
Sbjct: 89 tactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgtt 30
Query: 96 cttatattagtttacagagggagtaa 121
||||||||||||||| ||||||||||
Sbjct: 29 cttatattagtttacggagggagtaa 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||||||||||||||||||||||||| | ||||||| ||| ||||| |||||| ||
Sbjct: 5 tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64
Query: 96 cttatattagtttacagagggagta 120
|||||||||||||| |||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 39 tccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacactctt 98
|||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||| | |||
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 99 atattagtttacagagggagta 120
||||| ||||||||||||||||
Sbjct: 26 atatttgtttacagagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
|||||||||| |||||| |||||||| |||||||||| ||| ||||||||||||| |
Sbjct: 4 gtactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgc 63
Query: 95 tcttatattagtttacagaggga 117
||||||||| ||||| ||||||
Sbjct: 64 tcttatatttctttactgaggga 86
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 40 ccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacactctta 99
||||| ||||| ||||||||| ||||||||||||||||| |||||||||||| ||||||
Sbjct: 85 ccctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacgctctta 26
Query: 100 tattagtttacagagggagta 120
|||| |||||||||| ||||
Sbjct: 25 tatttctttacagaggtagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||| |||| ||||| ||||||||| ||||||||||||| ||||||||||||| ||
Sbjct: 5 tactacctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgct 64
Query: 96 cttatattagtttacagaggg 116
|||||||| |||||||||||
Sbjct: 65 cttatatttctttacagaggg 85
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 89.7 bits (45), Expect = 1e-17
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||||||||| ||||||||| |||||||| ||||||||||||||||| || ||
Sbjct: 89 tactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgct 30
Query: 96 cttatattagtttacagagggagta 120
|||||||| |||||||| ||||||
Sbjct: 29 cttatatttctttacagaaggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 34 tgtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaaca 93
|||||||| || ||||| ||||||||| ||| |||||||||| |||| |||||||||
Sbjct: 3 tgtactccttctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaaca 62
Query: 94 ctcttatattagtttacagagggagta 120
|||||||||| ||||| |||||||||
Sbjct: 63 ctcttatatttctttacggagggagta 89
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 89.7 bits (45), Expect = 1e-17
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||| |
Sbjct: 89 tactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacatt 30
Query: 96 cttatattagtttacagagggagta 120
|||||||| | ||| |||||||||
Sbjct: 29 cttatatttctgtacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 33 atgtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaac 92
|||||||||||||||| | ||||||||| ||||||||||||| |||| |||||||
Sbjct: 2 atgtactccctccgtacagaaatataagaatgtttagatcactaaagtagttatctaaat 61
Query: 93 actcttatattagtttacagagggagtaa 121
||||||||| ||||||||||||||||
Sbjct: 62 gatcttatatttctttacagagggagtaa 90
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
||||||||| |||||||||||||| | | ||||||||| ||||||||| ||||||| |
Sbjct: 90 gtactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgc 31
Query: 95 tcttatattagtttacagaggga 117
|||||||||||||||| ||||||
Sbjct: 30 tcttatattagtttacggaggga 8
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 39 tccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacactctt 98
||||||||||||||||||||||| |||||||| |||| || ||||||||| || ||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 99 atattagtttacagagggagta 120
||||||||||||| ||||||||
Sbjct: 68 atattagtttacaaagggagta 89
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum (bread
wheat)
Length = 92
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||||||||| ||||||||| ||||||| ||||||||| |||||||| ||| ||
Sbjct: 5 tactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgct 64
Query: 96 cttatattagtttac 110
|||||||| ||||||
Sbjct: 65 cttatatttgtttac 79
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 85.7 bits (43), Expect = 2e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
|||||||||| |||||||||||||||| | ||||||||||||| ||| |||||||||| |
Sbjct: 89 gtactccctctgtaaactaatataagagcatttagatcactac-ttaatgatctaaacgc 31
Query: 95 tcttatattagttta 109
| |||||||||||||
Sbjct: 30 ttttatattagttta 16
Score = 81.8 bits (41), Expect = 3e-15
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||||||| | ||||||||||||| | ||||||||||| || | ||||||||||| ||
Sbjct: 5 tactcccttcataaactaatataaaagcgtttagatcattaagt-agtgatctaaatgct 63
Query: 96 cttatattagtttacagagggagta 120
|||||||||||||||||||||||||
Sbjct: 64 cttatattagtttacagagggagta 88
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 83.8 bits (42), Expect = 6e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
||||||||||| ||||||||||||||| | ||||||| | || |||||||||||| |
Sbjct: 90 gtactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgc 31
Query: 95 tcttatattagtttacagagggagta 120
| ||||||||||||||||||||||||
Sbjct: 30 ttttatattagtttacagagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||| |||||||||||||| | | |||||||||||| |||| | ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgct 64
Query: 96 cttatattagtttacagagggagta 120
|||||||||||||| |||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
|||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 88 gtactccctctgtaaagaaatataagagtgtttagatcactactttagtgatctaaacac 29
Query: 95 t 95
|
Sbjct: 28 t 28
Score = 77.8 bits (39), Expect = 4e-14
Identities = 75/86 (87%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
|||||||||||||||| ||| |||| ||||||||||||| |||||||||||||||
Sbjct: 4 gtactccctccgtaaataaatgtaagt--gtttagatcactaaagtagtgatctaaacac 61
Query: 95 tcttatattagtttacagagggagta 120
||||||||| |||||||||||||||
Sbjct: 62 tcttatatttctttacagagggagta 87
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 79.8 bits (40), Expect = 1e-14
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 33 atgtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaac 92
|||||||||||| |||| ||||||||| | ||||||| |||||||||||| |||||||
Sbjct: 92 atgtactccctctataaagaaatataagagcatttagataactactttagtgctctaaac 33
Query: 93 actcttatattagtttacagagggagta 120
|||||||||| ||||| |||||||||
Sbjct: 32 gctcttatatttctttaccgagggagta 5
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 75.8 bits (38), Expect = 2e-13
Identities = 77/89 (86%), Gaps = 7/89 (7%)
Strand = Plus / Minus
Query: 35 gtactccctccgtaaactaatataagatcgttt-----agatc--actactttagtgatc 87
|||||||||| |||||||||||||||| ||||| ||||| |||| ||||||||||
Sbjct: 97 gtactccctctgtaaactaatataagagcgtttcatttagatctcactattttagtgatc 38
Query: 88 taaacactcttatattagtttacagaggg 116
|||| |||||||||||||||||||||||
Sbjct: 37 taaatgctcttatattagtttacagaggg 9
Score = 58.0 bits (29), Expect = 4e-08
Identities = 74/88 (84%), Gaps = 7/88 (7%)
Strand = Plus / Plus
Query: 40 ccctccgtaaactaatataagatcgtttagatcactactttagtga--tctaaa-----c 92
||||| |||||||||||||||| | |||||||||||| |||||| |||||| |
Sbjct: 9 ccctctgtaaactaatataagagcatttagatcactaaaatagtgagatctaaatgaaac 68
Query: 93 actcttatattagtttacagagggagta 120
|||||||||||||||||||||||||||
Sbjct: 69 gctcttatattagtttacagagggagta 96
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 73.8 bits (37), Expect = 6e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
|||||||||||||||||||||||| || |||| | || || |||||| || |||| ||
Sbjct: 89 tactccctccgtaaactaatataaaattatttaaaacattattttagtaatttaaatgct 30
Query: 96 cttatattagtttacagagggagta 120
||||||||||||||||||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 33 atgtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaac 92
|||||||||||| |||||||||||||| | | |||| || |||| || || | ||||
Sbjct: 2 atgtactccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaat 61
Query: 93 actcttatattagtttacagagggagtaa 121
| | |||||||||||||| ||||||||||
Sbjct: 62 aattttatattagtttacggagggagtaa 90
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 71.9 bits (36), Expect = 2e-12
Identities = 77/90 (85%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactt---tagtgatctaaac 92
||||||||| || || ||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 5 tactccctctgtgaataaatatgagagcgtttagatcactactactctagtgatctaaac 64
Query: 93 actcttatattagtttacagagggagtaac 122
||||||||||| |||||| ||||||||||
Sbjct: 65 gctcttatattattttacatagggagtaac 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 73/88 (82%), Gaps = 3/88 (3%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcacta---ctttagtgatctaaac 92
|||||||| ||||| |||||||||| |||||||||||||| |||||||||||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcactagagtagtagtgatctaaac 33
Query: 93 actcttatattagtttacagagggagta 120
|||| ||||| || ||||||||||||
Sbjct: 32 gctctcatatttattcacagagggagta 5
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 69.9 bits (35), Expect = 1e-11
Identities = 73/86 (84%), Gaps = 6/86 (6%)
Strand = Plus / Minus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
|||||||||| ||||| ||||||||| |||||||||||||| |||||||||| |
Sbjct: 84 gtactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgc 31
Query: 95 tcttatattagtttacagagggagta 120
||||||||| |||||||||||||||
Sbjct: 30 tcttatatttctttacagagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 72/85 (84%), Gaps = 6/85 (7%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacact 95
||||||||| ||||| ||||||||| ||||||||||| ||||||||||||| ||
Sbjct: 5 tactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgct 58
Query: 96 cttatattagtttacagagggagta 120
|||||||| |||||||||||||||
Sbjct: 59 cttatatttctttacagagggagta 83
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 89 aaacactcttatattagtttacagagggagtaa 121
|||||||||||||||||||||||||||||||||
Sbjct: 36 aaacactcttatattagtttacagagggagtaa 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 94 ctcttatattagtttacagagggagta 120
||||||||||||||||| |||||||||
Sbjct: 48 ctcttatattagtttaccgagggagta 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 35 gtactccctccgtaaactaatataaga 61
|||||||||| ||||||||||||||||
Sbjct: 75 gtactccctcggtaaactaatataaga 49
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataaga 61
||||||||| ||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataaga 30
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 63.9 bits (32), Expect = 6e-10
Identities = 76/91 (83%), Gaps = 6/91 (6%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcactact------ttagtgatcta 89
|||||||||| ||| ||||||||||| |||||||||||||| |||||||||||
Sbjct: 95 tactccctccacaaagaaatataagatcatttagatcactactactattttagtgatcta 36
Query: 90 aacactcttatattagtttacagagggagta 120
||| ||||||||| |||||||||||||||
Sbjct: 35 aacgatcttatatttctttacagagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataagatcgtttagatcacta 76
||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 5 tactccctctgtaaagaaatataagatcgtttagatcacta 45
>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
subsp. dicoccoides
Length = 96
Score = 54.0 bits (27), Expect = 6e-07
Identities = 68/81 (83%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 43 tccgtaaactaatataagatcgtttagatcactac---tttagtgatctaaacactctta 99
|||||||| ||||||||| ||||||||||||||| |||||||||||| || |||||
Sbjct: 12 tccgtaaagaaatataagaacgtttagatcactactattttagtgatctagacgctcttg 71
Query: 100 tattagtttacagagggagta 120
|||| ||||| || ||||||
Sbjct: 72 tatttctttacggatggagta 92
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 94 ctcttatattagtttacagagggagta 120
|||||||||||||||||||||||||||
Sbjct: 31 ctcttatattagtttacagagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 36 tactccctccgtaaactaatataaga 61
||||||||||||||||||||||||||
Sbjct: 62 tactccctccgtaaactaatataaga 37
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 94 ctcttatattagtttacagagggagta 120
||||||||||||||||| |||||||||
Sbjct: 36 ctcttatattagtttacggagggagta 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 36 tactccctccgtaaactaatataaga 61
||||||||| ||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataaga 30
>RF00906;MIR1122;AJ313099.1/1401-1309 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 35 gtactccctccgtaaactaatataagatcgtttagatcactactttagtgatctaaacac 94
|||||||||| ||||||| |||||||| ||||| ||||||||||||| |||||
Sbjct: 4 gtactccctctgtaaacttttataagatgttttaggccactactttagtggcctaaaatt 63
Query: 95 tcttatattagtttacagagggagta 120
||||||| |||||| ||||||||||
Sbjct: 64 tcttataaaagtttatagagggagta 89
>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 38 ctccctccgtaaactaatataagatcgtttagatcacta 76
||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 76 ctccctctgtaaagaaatataagatcatttagatcacta 38
