miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01960;SSU_rRNA_eukarya;AAYZ01438197.1/1-1685 9978:Ochotona
princeps (American pika)
Length = 1685
Score = 159 bits (80), Expect = 1e-38
Identities = 111/122 (90%), Gaps = 1/122 (0%)
Strand = Plus / Minus
Query: 1 tacggaagacccactccccggcgccgctcgtnnnnnnncccaagtccttctgatcgaagc 60
|||||||| |||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 294 tacggaagccccactccccggcgccgctcgtgggggg-cccaagtccttctgatcgaggc 236
Query: 61 ccaacccgtggacggtgtgaggccggtagcggcccccggcgcgccgggtccgggtcttcc 120
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 235 ccagcccgtggacggtgtgaggccggtagcggcccccggcgcgccgggcccgggtcttcc 176
Query: 121 cg 122
||
Sbjct: 175 cg 174
