miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 77/87 (88%)
Strand = Plus / Minus
Query: 13 taatactccctccgtaaactaatataagnagatttaggacactactttaataatctaaac 72
||||||||||||| |||||||||||||| |||||| ||||||||| | |||||||||
Sbjct: 92 taatactccctccataaactaatataagagcatttagaacactacttcagtaatctaaat 33
Query: 73 gtttttatattagtttacagagggagt 99
||| |||||||||||||| ||||||||
Sbjct: 32 gttcttatattagtttacggagggagt 6
Score = 54.0 bits (27), Expect = 4e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagnagatttag 49
||||||||||||||||||||||||| | ||||||
Sbjct: 5 tactccctccgtaaactaatataagaacatttag 38
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||||||||||||||||||| ||||| ||||||||| | ||||||| |||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 76 tttatattagtttacagagggagt 99
||||||||||||||||||||||||
Sbjct: 65 tttatattagtttacagagggagt 88
Score = 58.0 bits (29), Expect = 3e-08
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||| |||||||||||||| | |||||| ||||| || |||||||||| |
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 76 tttatattagtttacagagggagt 99
|||||||||||||| ||||||||
Sbjct: 29 cttatattagtttacggagggagt 6
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 74/84 (88%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||| | |||||||||||||| |||||| ||||||||||| ||||||||||| |
Sbjct: 89 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 30
Query: 76 tttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagt 6
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 66 tctaaacgtttttatattagtttacagagggagt 99
|||||| | |||||||||||||||||| ||||||
Sbjct: 55 tctaaatgcttttatattagtttacagggggagt 88
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||| ||||||||||||||| | ||||| ||||| |||| || |||||||| |
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 76 tttatattagtttacagagggagt 99
||||||||||||||| ||||||||
Sbjct: 29 tttatattagtttacggagggagt 6
Score = 65.9 bits (33), Expect = 1e-10
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
|||||||||||||||||||||||| ||||| | |||| || | |||||||||||
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 76 tttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 65 cttatattagtttacagagggagt 88
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 19 tccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgttttt 78
||||| |||||||||||||||| |||||| |||||| |||| ||||||||| | ||
Sbjct: 86 tcccttcgtaaactaatataagagcatttagaacactattttagtaatctaaatactctt 27
Query: 79 atattagtttacagagggagt 99
|||||||||||||||||||||
Sbjct: 26 atattagtttacagagggagt 6
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
|||||||||||||||||||||||| ||||| ||| || |||| |||| |||| | |
Sbjct: 89 tactccctccgtaaactaatataaaattatttaaaacattattttagtaatttaaatgct 30
Query: 76 tttatattagtttacagagggagt 99
||||||||||||||||||||||||
Sbjct: 29 tttatattagtttacagagggagt 6
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 73.8 bits (37), Expect = 4e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||||||||||||||||||| |||||| |||||| ||| | ||||||| | |
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcactac-ttagtgatctaaatgct 29
Query: 76 tttatattagtttacagagg 95
||||||||||||||||||||
Sbjct: 28 tttatattagtttacagagg 9
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 69.9 bits (35), Expect = 7e-12
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 14 aatactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacg 73
||||||||||| ||||||||||||||| |||| |||||||||| | |||||| ||
Sbjct: 3 aatactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcg 62
Query: 74 tttttatattagtttacagagggagt 99
| |||||||||||||||||||||||
Sbjct: 63 ctcttatattagtttacagagggagt 88
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 77 ttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 28 ttatattagtttacagagggagt 6
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 69.9 bits (35), Expect = 7e-12
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||| ||||||||||||||| ||||| |||||||||| | ||||||| | |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 76 tttatattagtttacagaggga 97
|||||||||||||||||||||
Sbjct: 29 cttatattagtttacagaggga 8
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 ttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 66 ttatattagtttacagagggagt 88
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 69.9 bits (35), Expect = 7e-12
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 14 aatactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacg 73
||||||||||| |||||||||||||| |||||| ||||| |||||||||||||| |
Sbjct: 3 aatactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatg 62
Query: 74 tttttatattagtttacagagggagt 99
| ||||||||||||| ||||||||
Sbjct: 63 ctcttatattagtttatggagggagt 88
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 65 atctaaacgtttttatattagtttacagagggagt 99
||||||| | |||||||||||||||||||||||||
Sbjct: 40 atctaaatgcttttatattagtttacagagggagt 6
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 69.9 bits (35), Expect = 7e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||| ||||||||||||||| |||||| |||||||| ||| ||||||||| |
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcactactt-aatgatctaaacgct 30
Query: 76 tttatattagttta 89
||||||||||||||
Sbjct: 29 tttatattagttta 16
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 ttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 65 ttatattagtttacagagggagt 87
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 67.9 bits (34), Expect = 3e-11
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||||||||||||||||||| ||||| || || |||| | |||||||| |
Sbjct: 87 tactccctccgtaaactaatataagagcgtttagaac--tattttagttatctaaacact 30
Query: 76 tttatattagtttacagagggagt 99
||||||||||||||||||||||||
Sbjct: 29 tttatattagtttacagagggagt 6
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 66 tctaaacgtttttatattagtttacagagggagt 99
|||||||| | |||||||||||||| ||||||||
Sbjct: 53 tctaaacgctcttatattagtttacggagggagt 86
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||||||||||||||||||| ||||| ||||| |||||| || |||| | |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 76 tttatattagtttacagagggagt 99
|||||||||||||| ||||||||
Sbjct: 65 cttatattagtttaccgagggagt 88
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||| ||||||||||||||| ||||| ||||| |||| |||| |||| |
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 76 tttatattagtttacagagggagt 99
||||||||||||||||||||||||
Sbjct: 65 tttatattagtttacagagggagt 88
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 77 ttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 28 ttatattagtttacagagggagt 6
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||||||||||||||||||| ||||| |||||| |||| | |||||||| |
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 76 tttatattagtttacagagggagt 99
||||||| ||||| |||||||||
Sbjct: 29 cttatattggtttatagagggagt 6
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 66 tctaaacgtttttatattagtttacagagggagt 99
|||||||| | |||||||||||||| ||||||||
Sbjct: 55 tctaaacgctcttatattagtttacggagggagt 88
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||| ||||||||||||||| |||||| ||||| || ||||||||||| |
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 76 tttatattagtttacagagggagt 99
|||||||||||||| ||||||||
Sbjct: 65 cttatattagtttacggagggagt 88
Score = 65.9 bits (33), Expect = 1e-10
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||||||||||||||||||| ||||| |||| |||| | ||||||| | |
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 76 tttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagt 6
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||| ||||||||||||||| ||||| ||||| |||| || |||||||| |
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 76 tttatattagtttacagagggagt 99
|||||||||||||| ||||||||
Sbjct: 65 cttatattagtttacggagggagt 88
Score = 65.9 bits (33), Expect = 1e-10
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||||||||||||||||||| ||||| | |||| || | ||||||||| |
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 76 tttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagt 6
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 63.9 bits (32), Expect = 4e-10
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||||||||| ||||||||| ||| | ||||| |||| | ||||||||| |
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64
Query: 76 tttatattagtttacagagggagtgct 102
|||||||||||||| |||||||||||
Sbjct: 65 cttatattagtttactgagggagtgct 91
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 52 cactactttaataatctaaacgtttttatattagtttacagagggagt 99
|||||||||| | ||||||||| | |||||||||||||||||||||||
Sbjct: 53 cactactttagtgatctaaacgctcttatattagtttacagagggagt 6
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 aatactccctccgtaaactaatataag 40
||||||||||| |||||||||||||||
Sbjct: 3 aatactccctctgtaaactaatataag 29
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 61.9 bits (31), Expect = 2e-09
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 14 aatactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacg 73
|||||| |||| ||||||||||||||| |||||| ||||| |||| | | |||||||
Sbjct: 91 aatacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacg 32
Query: 74 tttttatattagtttacagagggagt 99
| |||||||||||||| ||||||||
Sbjct: 31 ctcttatattagtttacggagggagt 6
Score = 58.0 bits (29), Expect = 3e-08
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
||||||||||||||||||||||||| |||||| ||||| || | ||||||| | |
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 76 tttatattagtttacagagg 95
|||||||||||||||||||
Sbjct: 65 cttatattagtttacagagg 84
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 60.0 bits (30), Expect = 7e-09
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 19 tccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgttttt 78
|||||||||||||||||||||| ||||| | |||| |||| ||||||| | ||||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 79 atattagtttacagagggagt 99
||||||||||||| |||||||
Sbjct: 68 atattagtttacaaagggagt 88
Score = 54.0 bits (27), Expect = 4e-07
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
|||||||| |||||||||||||| |||||| || ||||||| || |||||||| |
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30
Query: 76 tttatattagtttacagaggga 97
|||||||||||||| ||||||
Sbjct: 29 cttatattagtttacggaggga 8
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 60.0 bits (30), Expect = 7e-09
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 17 actccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgttt 76
|||||||||||||||||||||||| ||||| ||| | |||||| |||| |||| |
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 77 ttatattagtttacagaggga 97
||||||||||||||| |||||
Sbjct: 28 ttatattagtttacaaaggga 8
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 60.0 bits (30), Expect = 7e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 15 atactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgt 74
|||||||||||||||| ||||||||| ||||| ||||||||| | |||||||||
Sbjct: 4 atactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgc 63
Query: 75 ttttatattagtttacagagggagt 99
| ||||| ||||||||||| |||||
Sbjct: 64 tcttatagtagtttacagacggagt 88
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 52 cactactttaataatctaaacgtttttatattagtttacagagggagt 99
|||||||||| | ||||||| | | |||||||||||||||||||||||
Sbjct: 53 cactactttagtgatctaaaagctcttatattagtttacagagggagt 6
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 21 cctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtttttat 80
|||||||||||||||||||| ||||| ||||| |||| | ||| ||||| | ||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 81 attagtttacagagggagt 99
|||| ||||||||||||||
Sbjct: 24 attaatttacagagggagt 6
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 15 atactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgt 74
|||||||||| ||||||||||||||| ||| || |||||||||| | ||||||| |
Sbjct: 4 atactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgc 63
Query: 75 ttttatattagtttacagagggagt 99
| ||||||| ||||| ||||||||
Sbjct: 64 tcttatatttctttacggagggagt 88
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 77 ttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 28 ttatattagtttacagagggagt 6
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 52.0 bits (26), Expect = 2e-06
Identities = 70/84 (83%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagnagatttaggacactactttaataatctaaacgtt 75
|||||||||||||||||||||||| ||||| |||| |||| | |||||||| |
Sbjct: 87 tactccctccgtaaactaatataatagcgtttag--aactattttagttatctaaacact 30
Query: 76 tttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagt 6
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 66 tctaaacgtttttatattagtttacagagggagt 99
|||||||| | |||||||||||||| ||||||||
Sbjct: 53 tctaaacgctattatattagtttacggagggagt 86
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 15 atactccctccgtaaactaatataag 40
||||||||||||||||||||||||||
Sbjct: 135 atactccctccgtaaactaatataag 110
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 67 ctaaacgtttttatattagtttacagagggagt 99
||||||| | |||||||||||||||||||||||
Sbjct: 38 ctaaacgctcttatattagtttacagagggagt 6
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 52 cactactttaataatctaaacgtttttatattagtttacagagggagt 99
||||| |||||| ||||||| | | |||||||||||||| ||||||||
Sbjct: 86 cactattttaatgatctaaatgctcttatattagtttacggagggagt 133
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataag 40
|||||||||||||||||||||||||
Sbjct: 62 tactccctccgtaaactaatataag 38
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 taatactccctccgtaaactaatataag 40
|||||||||||| |||||||||||||||
Sbjct: 2 taatactccctctgtaaactaatataag 29
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 77 ttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 28 ttatattagtttacagagggagt 6
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 ttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 73 ttatattagtttacagagggagt 95
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 ttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 68 ttatattagtttacagagggagt 90
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 77 ttatattagtttacagagggagt 99
|||||||||||||||||||||||
Sbjct: 28 ttatattagtttacagagggagt 6
