miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 111 bits (56), Expect = 2e-24
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 14 gttactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatg 73
|||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||
Sbjct: 91 gttactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatg 32
Query: 74 cttttatattagttta 89
|| |||||||||||||
Sbjct: 31 ctcttatattagttta 16
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 15 ttactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgc 74
|||||||||| |||||||||||||||| | ||| |||||||| || | ||||||| ||
Sbjct: 4 ttactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgc 63
Query: 75 ttttatattagttta 89
| |||||||||||||
Sbjct: 64 tcttatattagttta 78
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 107 bits (54), Expect = 3e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 65 cttatattagttta 78
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataaga 41
||||||||| ||||||||||||||||
Sbjct: 89 tactccctcggtaaactaatataaga 64
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 101 bits (51), Expect = 2e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 15 ttactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgc 74
|||||||||| |||||||||||||||||||||| ||||||||||||| | |||||| ||
Sbjct: 90 ttactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgc 31
Query: 75 ttttatattagttta 89
|||||||||||||||
Sbjct: 30 ttttatattagttta 16
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||||||||||||||||||||||| | ||||| || |||| || ||||||||| | |
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 65 cttatattagttta 78
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 15 ttactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgc 74
||||||||||||||||||||||||||| |||| ||| |||| |||| |||||||||||
Sbjct: 4 ttactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgt 63
Query: 75 ttttatattagtttatatagtgagtaca 102
||||||||||||||| | || |||||||
Sbjct: 64 ttttatattagtttacagagggagtaca 91
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| |||||||||||||| ||| ||| |||||||| || | ||||||| ||
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 29 cttatattagttta 16
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 78/88 (88%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||||||||||||||||||||||||| ||||| || |||||||||| ||||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 76 tttatattagtttatatagtgagtacat 103
||||||| ||||||| || ||||||||
Sbjct: 29 cttatattggtttatagagggagtacat 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| ||||| ||||||||| |||| |||||||| || || |||||| |||
Sbjct: 5 tactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 64
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 65 cttatattagttta 78
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 30 actaatataagaacgtttggatcactattttaatgatctaaatgcttttatattagttta 89
|||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Score = 63.9 bits (32), Expect = 4e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaa 71
||||||||| |||||||||||||||| ||||| | ||| ||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttaggtcataattttaatgatctaaa 60
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||||||||||||||||||||||||| | ||| ||||| || || ||||||||| |||
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgct 75
Query: 76 tttatattagt 86
||||||||||
Sbjct: 74 cttatattagt 64
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 93.7 bits (47), Expect = 5e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| |||||||||||||| | | ||| ||||||||||||||| |||||||||||
Sbjct: 5 tactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgct 64
Query: 76 tttatattagtttat 90
||||||||||||||
Sbjct: 65 cttatattagtttat 79
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||||||||| ||||||||||||||| | ||| ||| | || || |||||||||||||
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30
Query: 76 tttatattagttta 89
||||||||||||||
Sbjct: 29 tttatattagttta 16
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||||||||| |||||||||| |||| ||||||||||||| ||||||||| |||
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 65 cttatattagttta 78
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 17 actccctccgtaaactaatataagaacgtttggatcacta 56
|||||||| |||||||||||||||| ||||| ||||||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcacta 49
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 91.7 bits (46), Expect = 2e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||||||||||||||||||||||||| | ||| |||||||| ||| |||||||||||||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcacta-cttagtgatctaaatgct 29
Query: 76 tttatattagttta 89
||||||||||||||
Sbjct: 28 tttatattagttta 15
Score = 50.1 bits (25), Expect = 6e-06
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 21 cctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgcttttat 80
|||| |||||||||||||| | | ||| |||||||| | | ||||||||||||| ||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcactaagt-agtgatctaaatgctcttat 67
Query: 81 attagttta 89
|||||||||
Sbjct: 68 attagttta 76
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 17 actccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgctt 76
||||||||||||||||||||||||| |||| |||||| ||||||||||||| || |||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 77 ttatattagttta 89
|||||||||||||
Sbjct: 28 ttatattagttta 16
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 19 tccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgctttt 78
||||||||||||||||||||||| ||||| || |||| |||||||||||||||||||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 79 atattagttta 89
|||||||||||
Sbjct: 68 atattagttta 78
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||||||| |||||||||||||| | | ||| ||||| || |||| | |||||| |||
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 29 cttatattagttta 16
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 85.7 bits (43), Expect = 1e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| |||||||||||||||| | ||| |||||||| || ||||||||||| |||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcactactt-aatgatctaaacgct 30
Query: 76 tttatattagtttat 90
|||||||||||||||
Sbjct: 29 tttatattagtttat 15
Score = 52.0 bits (26), Expect = 2e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||||||| | ||||||||||||| | ||||| ||||| || | | |||||||||||||
Sbjct: 5 tactcccttcataaactaatataaaagcgtttagatcattaagt-agtgatctaaatgct 63
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 64 cttatattagttta 77
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||||||||||||||||||||||||| ||||| | |||||| || |||||||||||||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 65 cttatattagttta 78
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||| |||| |||||||||||||||| | ||| ||||||||||||| ||| ||||| |||
Sbjct: 89 tacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgct 30
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 29 cttatattagttta 16
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| |||||||||||||||| ||||| ||||||||||||| | |||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 65 cttatattagttta 78
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||||||||||||||||||||||||| ||||| || |||| || ||||||||| |||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 29 cttatattagttta 16
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 21 cctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgcttttat 80
||||||||||||||||||||| ||||| ||||||||||||| ||||| ||| ||| ||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 81 attagttta 89
|||| ||||
Sbjct: 24 attaattta 16
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| ||||| |||||||||| |||||||||||||| || ||||||||| |||
Sbjct: 5 tactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgct 64
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 65 cttatattagttta 78
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||||||||||||||||||||||||| ||||| || ||||||||| | ||||||| ||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30
Query: 76 tttatattagttta 89
||||||||||||||
Sbjct: 29 tttatattagttta 16
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| |||||||||||||||| || || |||||||| |||| |||||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 65 cttatattagttta 78
Score = 60.0 bits (30), Expect = 7e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| |||||||||||||||| || || |||||||| || |||||||| |||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgct 30
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 29 cttatattagttta 16
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| |||||||||||||||| | ||| |||||||| |||| ||||||||| | |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 29 cttatattagttta 16
Score = 56.0 bits (28), Expect = 1e-07
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 19 tccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgctttt 78
|||||| |||||||||||||||| | ||| |||||||| || ||||||||| | | ||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 67
Query: 79 atattagtttatatagtgagtaca 102
||||||||||| | || |||||||
Sbjct: 68 atattagtttacagagggagtaca 91
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| |||||||||||||||| ||||| ||| |||| || || ||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 76 tttatattagttta 89
||||||||||||||
Sbjct: 65 tttatattagttta 78
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||| | |||||||||||||| | | ||| || ||||| |||| | ||||||| |||
Sbjct: 89 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 30
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 29 cttatattagttta 16
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||||||||| |||||||||| ||||| ||| |||| |||| ||||||||| |||
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 76 tttatattagttta 89
||||| |||||||
Sbjct: 65 cttatagtagttta 78
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 19 tccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgctttt 78
||||| ||||||||||||||||| | ||| || |||||||||| | |||||||| || ||
Sbjct: 86 tcccttcgtaaactaatataagagcatttagaacactattttagtaatctaaatactctt 27
Query: 79 atattagtttatatagtgagtacat 103
||||||||||| | || ||||||||
Sbjct: 26 atattagtttacagagggagtacat 2
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| |||||||||||||||| ||| ||| |||| || || ||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgct 64
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 65 cttatattagttta 78
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 73.8 bits (37), Expect = 4e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 29 aactaatataagaacgtttggatcactattttaatgatctaaatgcttttatattagttt 88
||||||||||||| ||||| |||||||| |||| ||||||||| ||| ||||||||||||
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17
Query: 89 a 89
|
Sbjct: 16 a 16
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| |||||||||||||||| ||||| |||||||| || ||||||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64
Query: 76 tttatattagtt 87
|||||||||||
Sbjct: 65 cttatattagtt 76
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| |||||||||||||||| | || |||||||| |||| |||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgct 64
Query: 76 tttatatt 83
|||||||
Sbjct: 65 cttatatt 72
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 15 ttactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgc 74
|||||||||||||||| ||||||||| | ||| |||||||| || |||||| |||||
Sbjct: 90 ttactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgc 31
Query: 75 ttttatattagttta 89
| |||||||||||||
Sbjct: 30 tcttatattagttta 16
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 15 ttactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgc 74
||||||||||||||||||||||||||||| ||| ||| ||| || || |||||||||
Sbjct: 4 ttactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgc 63
Query: 75 ttttatattagtttat 90
| ||||||||||||||
Sbjct: 64 tcttatattagtttat 79
Score = 60.0 bits (30), Expect = 7e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||||||||| ||||||||||||||| | ||| || ||||| || | | ||||||||| |
Sbjct: 89 tactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgtt 30
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 29 cttatattagttta 16
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| |||||||||||||||| |||| |||||||| |||| | || |||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 76 tttatattagttta 89
||||||||||||||
Sbjct: 65 tttatattagttta 78
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 15 ttactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgc 74
||||||||||||||||||||||||| | ||| | || ||||||| | || |||||||
Sbjct: 90 ttactccctccgtaaactaatataaaattatttaaaacattattttagtaatttaaatgc 31
Query: 75 ttttatattagtttatatagtgagtacat 103
||||||||||||||| | || ||||||||
Sbjct: 30 ttttatattagtttacagagggagtacat 2
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 51 tcactattttaatgatctaaatgcttttatattagttta 89
||||||||||| ||||||||||||| |||||||||||||
Sbjct: 54 tcactattttagtgatctaaatgctcttatattagttta 16
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
|||||||||||||||||||||||| | ||||| || ||||||||| | ||||||| ||
Sbjct: 87 tactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacact 30
Query: 76 tttatattagttta 89
|||||||||||||
Sbjct: 29 cttatattagttta 16
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataaga 41
||||||||| ||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataaga 30
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 58.0 bits (29), Expect = 3e-08
Identities = 65/76 (85%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactatt--ttaatgatctaaatg 73
||||||||| |||||||||||||||| | ||| |||||||| | ||| ||||||||| |
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaag 32
Query: 74 cttttatattagttta 89
| |||||||||||||
Sbjct: 31 gtcttatattagttta 16
Score = 46.1 bits (23), Expect = 1e-04
Identities = 71/86 (82%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 19 tccctccgtaaactaatataagaacgtttggatcacta--ttttaatgatctaaatgctt 76
|||||| |||||||||||||||| | ||| |||||||| | || ||||||||| | |
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtc 67
Query: 77 ttatattagtttatatagtgagtaca 102
||||||||||||| | || |||||||
Sbjct: 68 ttatattagtttacagagggagtaca 93
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 54.0 bits (27), Expect = 4e-07
Identities = 67/81 (82%), Gaps = 7/81 (8%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttgga-------tcactattttaatgatct 68
|||||||||| ||||||||||||||| ||||| || |||||| |||| ||||||
Sbjct: 96 tactccctccttaaactaatataagagcgtttagactttagatcactactttagtgatct 37
Query: 69 aaatgcttttatattagttta 89
||| ||| |||||||||||||
Sbjct: 36 aaaagctcttatattagttta 16
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcacta 56
||||||||| |||||||||||||||| | ||| ||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcttttagatcacta 45
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 19 tccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgctttt 78
|||||| ||||| ||||||||| ||||| ||||||||||||| |||||||| || ||
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 79 atattagttta 89
||||| |||||
Sbjct: 26 atatttgttta 16
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||||||||| ||||||||| ||||| | |||||| || | |||||| || |||
Sbjct: 5 tactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgct 64
Query: 76 tttatattagttta 89
||||||| |||||
Sbjct: 65 cttatatttgttta 78
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataaga 41
||||||||||||||||||||||||||
Sbjct: 62 tactccctccgtaaactaatataaga 37
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataaga 41
||||||||| ||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataaga 30
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 72/88 (81%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||| ||||| ||||||||| ||||| || ||||| || | |||||||||||
Sbjct: 5 tactccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatgct 64
Query: 76 tttatattagtttatatagtgagtacat 103
||||||| |||||| || ||||||||
Sbjct: 65 cttatatttctttatagagggagtacat 92
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 15 ttactccctccgtaaactaatataagaacgtttgga 50
|||||||||| |||||||||||||||| |||||||
Sbjct: 4 ttactccctctgtaaactaatataagagtgtttgga 39
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataaga 41
||||||||| ||||||||||||||||
Sbjct: 74 tactccctcggtaaactaatataaga 49
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaacgtttggatcactattttaatgatctaaatgct 75
||||||||||||||| ||||||||| |||| ||| |||| |||| ||||||| | |||
Sbjct: 89 tactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgct 30
Query: 76 tttatatt 83
|||||||
Sbjct: 29 cttatatt 22
>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
subsp. dicoccoides
Length = 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 23 tccgtaaactaatataagaacgtttggatcacta 56
|||||||| ||||||||||||||| ||||||||
Sbjct: 12 tccgtaaagaaatataagaacgtttagatcacta 45
