miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01960;SSU_rRNA_eukarya;AAYZ01438197.1/1-1685 9978:Ochotona
princeps (American pika)
Length = 1685
Score = 190 bits (96), Expect = 3e-48
Identities = 127/136 (93%), Gaps = 1/136 (0%)
Strand = Plus / Minus
Query: 1 tgtggcgtacggaagcccccatccccggcgccgctctcggggggcccaagtccttgtgat 60
||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||
Sbjct: 301 tgtggcgtacggaagccccactccccggcgccgctcgtggggggcccaagtccttctgat 242
Query: 61 cgaggcccagcccgcggacggtgtgaggccggtagcggccccccggcgcgccgggcccgg 120
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 241 cgaggcccagcccgtggacggtgtgaggccggtagcggc-ccccggcgcgccgggcccgg 183
Query: 121 ggcttctcggagtcgg 136
| |||| |||||||||
Sbjct: 182 gtcttcccggagtcgg 167
