miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01059;mir-598;AAWZ01026937.1/32325-32387 28377:Anolis
carolinensis (green anole)
Length = 63
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatgctg 79
|||||||| ||||||||||||||||||||
Sbjct: 7 tgatgatgatgatgatggtgatgatgctg 35
>RF01059;mir-598;AACY022425759.1/145-57 408172:marine metagenome
Length = 89
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 49 gttgatgatgctgatgatggtgatgatg 76
|||||||||| |||||||||||||||||
Sbjct: 5 gttgatgatggtgatgatggtgatgatg 32
>RF01059;mir-598;AACY023159829.1/597-503 408172:marine metagenome
Length = 95
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 60 tgatgatggtgatgatggtgatgatg 85
>RF01059;mir-598;ABMC01214723.1/73-2 408172:marine metagenome
Length = 72
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
||||||||| ||||||||||||||||
Sbjct: 13 tgatgatgccgatgatggtgatgatg 38
>RF01059;mir-598;AM448406.2/13730-13821 29760:Vitis vinifera
Length = 92
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 22 tgatgatgatgatgatggtgatgatg 47
>RF01059;mir-598;CAAP02000391.1/114427-114342 29760:Vitis vinifera
Length = 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 16 tgatgatgatgatgatggtgatgatg 41
>RF01059;mir-598;AASC02007643.1/2176-2082 6500:Aplysia californica
(California sea hare)
Length = 95
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 25 tgatgatgatgatgatggtgatgatg 50
>RF01059;mir-598;AASC02022833.1/1226-1315 6500:Aplysia californica
(California sea hare)
Length = 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
||||||||||||||||| ||||||||
Sbjct: 4 tgatgatgctgatgatgctgatgatg 29
>RF01059;mir-598;AASC02031321.1/1743-1615 6500:Aplysia californica
(California sea hare)
Length = 129
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 19 tgatgatgatgatgatggtgatgatg 44
>RF01059;mir-598;AASC02049159.1/2565-2660 6500:Aplysia californica
(California sea hare)
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 7 tgatgatgatgatgatggtgatgatg 32
>RF01059;mir-598;AASC02024563.1/1425-1327 6500:Aplysia californica
(California sea hare)
Length = 99
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 25 tgatgatgatgatgatggtgatgatg 50
>RF01059;mir-598;AASC02005512.1/18441-18347 6500:Aplysia
californica (California sea hare)
Length = 95
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 7 tgatgatgatgatgatggtgatgatg 32
>RF01059;mir-598;AASC02057156.1/16789-16691 6500:Aplysia
californica (California sea hare)
Length = 99
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 22 tgatgatgatgatgatggtgatgatg 47
>RF01059;mir-598;AASC02020841.1/5362-5244 6500:Aplysia californica
(California sea hare)
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 7 tgatgatgatgatgatggtgatgatg 32
>RF01059;mir-598;AASC02023329.1/643-739 6500:Aplysia californica
(California sea hare)
Length = 97
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
||||||||||||||||| ||||||||
Sbjct: 46 tgatgatgctgatgatgatgatgatg 71
>RF01059;mir-598;AASC02015849.1/2552-2453 6500:Aplysia californica
(California sea hare)
Length = 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 1 tgatgatggtgatgatggtgatgatg 26
>RF01059;mir-598;AASC02020114.1/13394-13305 6500:Aplysia
californica (California sea hare)
Length = 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 1 tgatgatgatgatgatggtgatgatg 26
>RF01059;mir-598;AASC02047999.1/43227-43327 6500:Aplysia
californica (California sea hare)
Length = 101
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 34 tgatgatgatgatgatggtgatgatg 59
>RF01059;mir-598;AASC02046392.1/358-281 6500:Aplysia californica
(California sea hare)
Length = 78
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 19 tgatgatgatgatgatggtgatgatg 44
>RF01059;mir-598;AASC02008265.1/43-137 6500:Aplysia californica
(California sea hare)
Length = 95
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 28 tgatgatgatgatgatggtgatgatg 53
>RF01059;mir-598;AASC02058934.1/15754-15845 6500:Aplysia
californica (California sea hare)
Length = 92
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 19 tgatgatgatgatgatggtgatgatg 44
>RF01059;mir-598;AASC02061704.1/5942-5848 6500:Aplysia californica
(California sea hare)
Length = 95
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 22 tgatgatgatgatgatggtgatgatg 47
>RF01059;mir-598;AAGJ02142090.1/4118-4216 7668:Strongylocentrotus
purpuratus
Length = 99
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatgctgt 80
|||||||| |||||||| ||||||||||||
Sbjct: 31 tgatgatgatgatgatgatgatgatgctgt 60
>RF01059;mir-598;AAGJ02013847.1/74-160 7668:Strongylocentrotus
purpuratus
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 72 tgatgatgatgatgatggtgatgatg 47
>RF01059;mir-598;AAGJ02143517.1/2592-2686 7668:Strongylocentrotus
purpuratus
Length = 95
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 13 tgatgatgatgatgatggtgatgatg 38
>RF01059;mir-598;AAGJ02006136.1/4229-4134 7668:Strongylocentrotus
purpuratus
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 28 tgatgatgatgatgatggtgatgatg 53
>RF01059;mir-598;ABRM01048038.1/1377-1472 6085:Hydra
magnipapillata
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 37 tgatgatgatgatgatggtgatgatg 62
>RF01059;mir-598;ABRM01005596.1/26871-26782 6085:Hydra
magnipapillata
Length = 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 19 tgatgatgatgatgatggtgatgatg 44
>RF01059;mir-598;ABRM01024770.1/5677-5772 6085:Hydra
magnipapillata
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 7 tgatgatgatgatgatggtgatgatg 32
>RF01059;mir-598;ABRM01019376.1/2604-2699 6085:Hydra
magnipapillata
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 13 tgatgatgatgatgatggtgatgatg 38
>RF01059;mir-598;ABRM01006515.1/18546-18451 6085:Hydra
magnipapillata
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 10 tgatgatgatgatgatggtgatgatg 35
>RF01059;mir-598;ABRM01003306.1/8708-8612 6085:Hydra
magnipapillata
Length = 97
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 30 tgatgatgatgatgatggtgatgatg 5
>RF01059;mir-598;ABRM01017242.1/16351-16443 6085:Hydra
magnipapillata
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
||||||||||||||||| ||||||||
Sbjct: 7 tgatgatgctgatgatgatgatgatg 32
>RF01059;mir-598;ABRM01018548.1/5011-4915 6085:Hydra
magnipapillata
Length = 97
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 13 tgatgatggtgatgatggtgatgatg 38
>RF01059;mir-598;ABRM01103833.1/961-1057 6085:Hydra magnipapillata
Length = 97
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 4 tgatgatgatgatgatggtgatgatg 29
>RF01059;mir-598;ABRM01036353.1/1299-1355 6085:Hydra
magnipapillata
Length = 57
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 7 tgatgatgatgatgatggtgatgatg 32
>RF01059;mir-598;ABRM01070298.1/2422-2517 6085:Hydra
magnipapillata
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 31 tgatgatgatgatgatggtgatgatg 56
>RF01059;mir-598;ABVD01021671.1/2727-2811 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 85
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 1 tgatgatgatgatgatggtgatgatg 26
>RF01059;mir-598;AAWR02007466.1/305-210 9796:Equus caballus
(horse)
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 1 tgatgatggtgatgatggtgatgatg 26
>RF01059;mir-598;AL445250.4/67580-67679 9606:Homo sapiens (human)
Length = 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 1 tgatgatgatgatgatggtgatgatg 26
>RF01059;mir-598;CABD01022807.1/2507-2415 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 7 tgatgatgatgatgatggtgatgatg 32
>RF01059;mir-598;AAQQ01279510.1/6521-6431 43179:Spermophilus
tridecemlineatus (thirteen-lined ground squirrel)
Length = 91
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 22 tgatgatgatgatgatggtgatgatg 47
>RF01059;mir-598;AABR04007664.1/50951-50866 10116:Rattus
norvegicus (Norway rat)
Length = 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 22 tgatgatgatgatgatggtgatgatg 47
>RF01059;mir-598;AAWZ01030352.1/9921-10017 28377:Anolis
carolinensis (green anole)
Length = 97
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 40 tgatgatgatgatgatggtgatgatg 65
>RF01059;mir-598;AAWZ01037074.1/38594-38499 28377:Anolis
carolinensis (green anole)
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 7 tgatgatgatgatgatggtgatgatg 32
>RF01059;mir-598;CAAK05047073.1/11742-11647 7955:Danio rerio
(zebrafish)
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 13 tgatgatgatgatgatggtgatgatg 38
>RF01059;mir-598;CAAB01003802.1/13919-13825 31033:Takifugu
rubripes
Length = 95
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
||||||||||||||||| ||||||||
Sbjct: 25 tgatgatgctgatgatgatgatgatg 50
>RF01059;mir-598;ABKP02019789.1/2803-2677 377271:Anopheles gambiae
M
Length = 127
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 16 tgatgatgatgatgatggtgatgatg 41
>RF01059;mir-598;AAQB01006884.1/41700-41786 7260:Drosophila
willistoni
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 51 tgatgatgctgatgatggtgatgatg 76
||||||||||||||||| ||||||||
Sbjct: 75 tgatgatgctgatgatgatgatgatg 50
>RF01059;mir-598;AANI01016597.1/18315-18448 7244:Drosophila
virilis
Length = 134
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
||||||||||||||||| ||||||||
Sbjct: 4 tgatgatgctgatgatgatgatgatg 29
>RF01059;mir-598;EU527977.1/47-137 13286:Theromyzon tessulatum
Length = 91
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 13 tgatgatgatgatgatggtgatgatg 38
>RF01059;mir-598;AC171141.2/74913-74999 6412:Helobdella robusta
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 22 tgatgatgatgatgatggtgatgatg 47
>RF01059;mir-598;AACE03000003.1/822744-822839 226302:Saccharomyces
kluyveri NRRL Y-12651
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 7 tgatgatggtgatgatggtgatgatg 32
>RF01059;mir-598;ABKH01000403.1/12560-12674
502779:Paracoccidioides brasiliensis Pb01
Length = 115
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 tgatgatgctgatgatggtgatgatg 76
|||||||| |||||||||||||||||
Sbjct: 19 tgatgatgatgatgatggtgatgatg 44
