miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
          Length = 106

 Score =  135 bits (68), Expect = 1e-31
 Identities = 92/100 (92%)
 Strand = Plus / Plus

                                                                       
Query: 11  tactccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaattttat 70
           ||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||| | ||
Sbjct: 5   tactccctccgtcccaaaataagtgtcgcaaatttagtactaagttagtacaaatataat 64

                                                   
Query: 71  agtaaagcagcgacacttattttggaacggagggagtata 110
           | || |||||||||||||||||||| ||||||||||||||
Sbjct: 65  actagagcagcgacacttattttgggacggagggagtata 104



 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 82/100 (82%)
 Strand = Plus / Minus

                                                                       
Query: 9   tatactccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaatttt 68
           ||||||||||| ||||||||||||||| |||   | ||||||||  || |||| || || 
Sbjct: 104 tatactccctccgtcccaaaataagtgtcgctgctctagtattatatttgtactaactta 45

                                                   
Query: 69  atagtaaagcagcgacacttattttggaacggagggagta 108
            || ||||   |||||||||||||||| ||||||||||||
Sbjct: 44  gtactaaatttgcgacacttattttgggacggagggagta 5




>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 106

 Score =  117 bits (59), Expect = 3e-26
 Identities = 89/99 (89%)
 Strand = Plus / Minus

                                                                       
Query: 10  atactccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaatttta 69
           |||||||||||||||||||||||||| | ||||||||  | ||| |||||||||||||||
Sbjct: 103 atactccctctgtcccaaaataagtgtcacaaatttataactaaattagtacaaatttta 44

                                                  
Query: 70  tagtaaagcagcgacacttattttggaacggagggagta 108
           || |||| |||||||||||||||||  ||||||||||||
Sbjct: 43  tactaaatcagcgacacttattttgatacggagggagta 5




>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 106

 Score = 97.6 bits (49), Expect = 3e-20
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                       
Query: 8   atatactccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaattt 67
           |||||||||||| |||  |||||||||| | |||||||||||||||||||||| ||||||
Sbjct: 2   atatactccctccgtcttaaaataagtgtcacaaatttagtattaagttagtataaattt 61

                                                    
Query: 68  tatagtaaagcagcgacacttattttggaacggagggagta 108
             || |||| |||||||||||||||||| ||| ||| ||||
Sbjct: 62  agtactaaaacagcgacacttattttgggacgaaggaagta 102




>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
           subsp. vulgare (domesticated barley)
          Length = 106

 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                       
Query: 8   atatactccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaattt 67
           |||||||||||  |||  ||||||||||||||| ||| |||| ||| | |||||||||||
Sbjct: 2   atatactcccttcgtcttaaaataagtgacgcatattcagtactaaatgagtacaaattt 61

                                                     
Query: 68  tatagtaaagcagcgacacttattttggaacggagggagtat 109
           | || || | || ||||||||||||| | |||||||||||||
Sbjct: 62  tgtactagatcaacgacacttattttaggacggagggagtat 103




>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
           subsp. durum (durum wheat)
          Length = 110

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                        
Query: 67  ttatagtaaagcagcgacacttattttggaacggagggagtatat 111
           ||||| |||| |||||||||||||||||||||||| |||||||||
Sbjct: 46  ttatactaaatcagcgacacttattttggaacggaaggagtatat 2



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 73  taaagcagcgacacttattttggaacggagggagta 108
           |||| |||||||||||||||||| ||||||| ||||
Sbjct: 71  taaatcagcgacacttattttgggacggaggtagta 106




>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 106

 Score = 63.9 bits (32), Expect = 4e-10
 Identities = 80/96 (83%)
 Strand = Plus / Minus

                                                                       
Query: 11  tactccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaattttat 70
           ||||||||| ||||||||||||||| || |||||||  |  ||  |||||||||||||||
Sbjct: 102 tactccctcggtcccaaaataagtgtcgtaaatttataaccaaactagtacaaattttat 43

                                               
Query: 71  agtaaagcagcgacacttattttggaacggagggag 106
           | ||||   |||||||| ||||||  ||||||||||
Sbjct: 42  actaaatgggcgacactcattttgagacggagggag 7




>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
          Length = 116

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                             
Query: 8  atatactccctctgtcccaaaataagtgacgcaaa 42
          |||||||||||||||||||||||||||||| ||||
Sbjct: 2  atatactccctctgtcccaaaataagtgactcaaa 36



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 9   tatactccctctgtcccaaaataagtgacgcaaa 42
           ||||||||||| ||||||||||||||||| ||||
Sbjct: 114 tatactccctccgtcccaaaataagtgactcaaa 81



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 84  cacttattttggaacggagggagtata 110
           |||||||||||| ||||||||||||||
Sbjct: 88  cacttattttgggacggagggagtata 114




>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
          Length = 94

 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 8  atatactccctctgtcccaaaataagtgac 37
          ||||||||||||||||||||||||||||||
Sbjct: 2  atatactccctctgtcccaaaataagtgac 31




>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 105

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 82  gacacttattttggaacggagggagtata 110
           |||||||||||||||||||||||||||||
Sbjct: 31  gacacttattttggaacggagggagtata 3




>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
           subsp. vulgare (domesticated barley)
          Length = 105

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 82  gacacttattttggaacggagggagtata 110
           |||||||||||||||||||||||||||||
Sbjct: 31  gacacttattttggaacggagggagtata 3



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 87  ttattttggaacggagggagtat 109
           |||||||||||||||||||||||
Sbjct: 80  ttattttggaacggagggagtat 102




>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
           wheat)
          Length = 134

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 82  gacacttattttggaacggagggagtat 109
           ||||||||||||||||||||||||||||
Sbjct: 104 gacacttattttggaacggagggagtat 131




>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
          Length = 68

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                     
Query: 11 tactccctctgtcccaaaataagtgac 37
          |||||||||||||||||||||||||||
Sbjct: 64 tactccctctgtcccaaaataagtgac 38



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 84  cacttattttggaacggagggagtatat 111
           |||||||||||| |||||||||||||||
Sbjct: 29  cacttattttgggacggagggagtatat 2



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 8  atatactccctctgtcccaaaataagtg 35
          |||||||||||| |||||||||||||||
Sbjct: 2  atatactccctccgtcccaaaataagtg 29




>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
          Length = 105

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 79/95 (83%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                       
Query: 14  tccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaattttatagt 73
           |||||| ||||||||||||||| |    ||||||||  ||||||||| ||| ||  || |
Sbjct: 8   tccctccgtcccaaaataagtgtcattgatttagtacaaagttagtataaagttg-tatt 66

                                              
Query: 74  aaagcagcgacacttattttggaacggagggagta 108
           ||| |||||||||||||||||| |||| |||||||
Sbjct: 67  aaatcagcgacacttattttgggacggcgggagta 101




>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
           subsp. vulgare (domesticated barley)
          Length = 105

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 82  gacacttattttggaacggagggagta 108
           |||||||||||||||||||||||||||
Sbjct: 31  gacacttattttggaacggagggagta 5




>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
           wheat)
          Length = 86

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 73  taaagcagcgacacttattttggaacggagggagtata 110
           |||| |||||||||||||||||| |||| |||||||||
Sbjct: 47  taaatcagcgacacttattttgggacggtgggagtata 84




>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 115

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 9  tatactccctctgtcccaaaataagtgacgcaaa 42
          |||| |||||||||||||||||||||||| ||||
Sbjct: 3  tataatccctctgtcccaaaataagtgactcaaa 36



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 11  tactccctctgtcccaaaataagtgacgcaaa 42
           ||||||||| ||||||||||||||||| ||||
Sbjct: 111 tactccctccgtcccaaaataagtgactcaaa 80




>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 105

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 82  gacacttattttggaacggagggagtatat 111
           |||||||||||||| |||||||||||||||
Sbjct: 75  gacacttattttgggacggagggagtatat 104



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 7   gatatactccctctgtcccaaaataagtg 35
           ||||||||||||| |||||||||||||||
Sbjct: 105 gatatactccctccgtcccaaaataagtg 77



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 82  gacacttattttggaacggagggagta 108
           |||||||||||||| ||||||||||||
Sbjct: 31  gacacttattttgggacggagggagta 5




>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
           wheat)
          Length = 105

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 82  gacacttattttggaacggagggagtata 110
           |||||||||||||| ||||||||||||||
Sbjct: 75  gacacttattttgggacggagggagtata 103



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 9   tatactccctctgtcccaaaataagtg 35
           ||||||||||| |||||||||||||||
Sbjct: 103 tatactccctccgtcccaaaataagtg 77




>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
           wheat)
          Length = 104

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 82  gacacttattttggaacggagggagtata 110
           |||||||||||||| ||||||||||||||
Sbjct: 31  gacacttattttgggacggagggagtata 3



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 82  gacacttattttggaacggagggagtat 109
           |||||||||||||| |||||||||||||
Sbjct: 74  gacacttattttgggacggagggagtat 101



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  tatactccctctgtcccaaaataagtg 35
          ||||||||||| |||||||||||||||
Sbjct: 3  tatactccctccgtcccaaaataagtg 29



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 10  atactccctctgtcccaaaataagtg 35
           |||||||||| |||||||||||||||
Sbjct: 101 atactccctccgtcccaaaataagtg 76




>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
          Length = 104

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 9   tatactccctctgtcccaaaataagtgac 37
           ||||||||||| |||||||||||||||||
Sbjct: 102 tatactccctccgtcccaaaataagtgac 74



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 84  cacttattttggaacggagggagtata 110
           |||||||||||| ||||||||||||||
Sbjct: 76  cacttattttgggacggagggagtata 102




>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
          Length = 105

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 82  gacacttattttggaacggagggagtata 110
           |||||||||||||| ||||||||||||||
Sbjct: 31  gacacttattttgggacggagggagtata 3



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  tatactccctctgtcccaaaataagtg 35
          ||||||||||| |||||||||||||||
Sbjct: 3  tatactccctccgtcccaaaataagtg 29




>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
          Length = 105

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 82  gacacttattttggaacggagggagtata 110
           |||||||||||||| ||||||||||||||
Sbjct: 31  gacacttattttgggacggagggagtata 3



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  tatactccctctgtcccaaaataagtg 35
          ||||||||||| |||||||||||||||
Sbjct: 3  tatactccctccgtcccaaaataagtg 29




>RF00906;MIR1122;AP008213.1/28683389-28683301 39947:Oryza sativa
           Japonica Group
          Length = 89

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 84  cacttattttggaacggagggagta 108
           |||||||||||||||||||||||||
Sbjct: 61  cacttattttggaacggagggagta 85




>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
           (barrel medic)
          Length = 122

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 88  tattttggaacggagggagtatat 111
           ||||||||||||||||||||||||
Sbjct: 98  tattttggaacggagggagtatat 121




>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
           wheat)
          Length = 107

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 84  cacttattttggaacggagggagtatat 111
           |||||||||||| |||||||||||||||
Sbjct: 29  cacttattttgggacggagggagtatat 2



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 8  atatactccctctgtcccaaaataagtg 35
          |||||||||||| |||||||||||||||
Sbjct: 2  atatactccctccgtcccaaaataagtg 29




>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
           subsp. dicoccoides
          Length = 105

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 82  gacacttattttggaacggagggagtat 109
           |||||||||||||| |||||||||||||
Sbjct: 31  gacacttattttgggacggagggagtat 4



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 10 atactccctctgtcccaaaataagtg 35
          |||||||||| |||||||||||||||
Sbjct: 4  atactccctccgtcccaaaataagtg 29




>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
          Length = 132

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 10 atactccctctgtcccaaaataagtgac 37
          |||||||||| |||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaataagtgac 31



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 84  cacttattttggaacggagggagtat 109
           |||||||||||| |||||||||||||
Sbjct: 29  cacttattttgggacggagggagtat 4




>RF00906;MIR1122;AP008212.1/3593579-3593709 39947:Oryza sativa
           Japonica Group
          Length = 131

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 8   atatactccctctgtcccaaaata 31
           ||||||||||||||||||||||||
Sbjct: 130 atatactccctctgtcccaaaata 107




>RF00906;MIR1122;ABXC01000529.1/263619-263734 4558:Sorghum bicolor
           (sorghum)
          Length = 116

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 90  ttttggaacggagggagtatata 112
           |||||||||||||||||||||||
Sbjct: 23  ttttggaacggagggagtatata 1




>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
          Length = 101

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 11 tactccctctgtcccaaaataagtgac 37
          ||||| |||||||||||||||||||||
Sbjct: 97 tactcgctctgtcccaaaataagtgac 71




>RF00906;MIR1122;DQ154924.1/3536-3603 4571:Triticum turgidum
          Length = 68

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 88  tattttggaacggagggagtata 110
           |||||||||||||||||||||||
Sbjct: 44  tattttggaacggagggagtata 66




>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
           wheat)
          Length = 93

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 82  gacacttattttggaacggagggagtatata 112
           |||||||||||||| ||||||| ||||||||
Sbjct: 63  gacacttattttgggacggaggaagtatata 93



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                
Query: 13 ctccctctgtcccaaaataagtgacgcaaatttagtat 50
          ||||||| ||||||||||||||| | ||| ||||||||
Sbjct: 7  ctccctccgtcccaaaataagtgtctcaactttagtat 44




>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
           (bread wheat)
          Length = 105

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 82  gacacttattttggaacggagggagtatata 112
           |||||||||||| ||||||| ||||||||||
Sbjct: 31  gacacttattttagaacggaaggagtatata 1




>RF00906;MIR1122;AY137517.1/5819-5912 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 94

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 82  gacacttattttggaacggagggagta 108
           ||||||||||||||| |||||||||||
Sbjct: 64  gacacttattttggatcggagggagta 90




>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
          Length = 165

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 88  tattttggaacggagggagtata 110
           |||||||||||||||||||||||
Sbjct: 143 tattttggaacggagggagtata 165




>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
          Length = 115

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 11  tactccctctgtcccaaaataagtgac 37
           ||||||||| |||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagtgac 85




>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 86

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 82  gacacttattttggaacggagggagta 108
           |||||||||||||| ||||||||||||
Sbjct: 31  gacacttattttgggacggagggagta 5




>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
          Length = 112

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 82  gacacttattttggaacggagggagta 108
           |||||||||||||| ||||||||||||
Sbjct: 31  gacacttattttgggacggagggagta 5




>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
          Length = 105

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 82  gacacttattttggaacggagggagta 108
           |||||||||||||| ||||||||||||
Sbjct: 75  gacacttattttgggacggagggagta 101




>RF00906;MIR1122;EU730897.1/72285-72181 15368:Brachypodium
           distachyon
          Length = 105

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 82  gacacttattttggaacggagggagtatata 112
           |||||||||| |||| |||||||||||||||
Sbjct: 75  gacacttattatggatcggagggagtatata 105




>RF00906;MIR1122;AAAA02021906.1/16695-16573 39946:Oryza sativa
           Indica Group
          Length = 123

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 10  atactccctctgtcccaaaataa 32
           |||||||||||||||||||||||
Sbjct: 120 atactccctctgtcccaaaataa 98




>RF00906;MIR1122;AAAA02008325.1/22579-22685 39946:Oryza sativa
          Indica Group
          Length = 107

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  tatactccctctgtcccaaaataagtg 35
          ||||||||||||||||||| |||||||
Sbjct: 3  tatactccctctgtcccaatataagtg 29




>RF00906;MIR1122;AP004740.3/39878-39774 39947:Oryza sativa
          Japonica Group
          Length = 105

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 8  atatactccctctgtcccaaaataagt 34
          ||||||| |||||||||||||||||||
Sbjct: 2  atatacttcctctgtcccaaaataagt 28




>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
           Japonica Group
          Length = 245

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 10  atactccctctgtcccaaaataagtg 35
           |||||||||| |||||||||||||||
Sbjct: 245 atactccctccgtcccaaaataagtg 220



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 84  cacttattttggaacggagggagtat 109
           |||||||||||| |||||||||||||
Sbjct: 220 cacttattttgggacggagggagtat 245




>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa Japonica
           Group
          Length = 247

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 83  acacttattttggaacggagggagta 108
           ||||||||||||| ||||||||||||
Sbjct: 27  acacttattttgggacggagggagta 2




>RF01058;MIR806;AACV01008707.1/8338-8098 39947:Oryza sativa
          Japonica Group
          Length = 241

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atactccctctgtcccaaaata 31
          ||||||||||||||||||||||
Sbjct: 1  atactccctctgtcccaaaata 22




>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
           Japonica Group
          Length = 244

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 84  cacttattttggaacggagggagtat 109
           |||||||||||| |||||||||||||
Sbjct: 26  cacttattttgggacggagggagtat 1



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 10 atactccctctgtcccaaaataagtg 35
          |||||||||| |||||||||||||||
Sbjct: 1  atactccctccgtcccaaaataagtg 26




>RF01058;MIR806;AC136971.3/14967-14725 39947:Oryza sativa Japonica
           Group
          Length = 243

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 10  atactccctctgtcccaaaata 31
           ||||||||||||||||||||||
Sbjct: 243 atactccctctgtcccaaaata 222




>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa Indica
           Group
          Length = 243

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 84  cacttattttggaacggagggagtat 109
           |||||||||||| |||||||||||||
Sbjct: 26  cacttattttgggacggagggagtat 1



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 10 atactccctctgtcccaaaataagtg 35
          |||||||||| |||||||||||||||
Sbjct: 1  atactccctccgtcccaaaataagtg 26




>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
           Group
          Length = 241

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 10  atactccctctgtcccaaaataagtg 35
           |||||||||| |||||||||||||||
Sbjct: 241 atactccctccgtcccaaaataagtg 216



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 84  cacttattttggaacggagggagtat 109
           |||||||||||| |||||||||||||
Sbjct: 216 cacttattttgggacggagggagtat 241




>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
           (barrel medic)
          Length = 157

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 88  tattttggaacggagggagtat 109
           ||||||||||||||||||||||
Sbjct: 133 tattttggaacggagggagtat 154




>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
           (barrel medic)
          Length = 155

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 88  tattttggaacggagggagtat 109
           ||||||||||||||||||||||
Sbjct: 131 tattttggaacggagggagtat 152




>RF00906;MIR1122;EU660899.1/111846-111744 4567:Triticum turgidum
           subsp. durum (durum wheat)
          Length = 103

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 88  tattttggaacggagggagtat 109
           ||||||||||||||||||||||
Sbjct: 25  tattttggaacggagggagtat 4




>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum (bread
           wheat)
          Length = 94

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 88  tattttggaacggagggagtat 109
           ||||||||||||||||||||||
Sbjct: 25  tattttggaacggagggagtat 4




>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
           spontaneum
          Length = 136

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 89  attttggaacggagggagtata 110
           ||||||||||||||||||||||
Sbjct: 24  attttggaacggagggagtata 3




>RF00906;MIR1122;AY821690.1/1219-1313 4485:Aegilops comosa
          Length = 95

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 81  cgacacttattttggaacggagggagtata 110
           |||| ||||||||||| |||||||||||||
Sbjct: 32  cgacgcttattttggatcggagggagtata 3




>RF00906;MIR1122;EF059989.1/239319-239424 29664:Brachypodium
           sylvaticum
          Length = 106

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 79  agcgacacttattttggaacggagggagta 108
           ||||||||||||| |||| |||||||||||
Sbjct: 34  agcgacacttattatggatcggagggagta 5



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 79  agcgacacttattttggaacggagggagta 108
           ||||||||||||| |||| |||||||||||
Sbjct: 73  agcgacacttattatggatcggagggagta 102




>RF00906;MIR1122;EU730902.1/9047-9151 15368:Brachypodium distachyon
          Length = 105

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 82  gacacttattttggaacggagggagtatat 111
           |||||||||| |||| ||||||||||||||
Sbjct: 75  gacacttattatggatcggagggagtatat 104




>RF00906;MIR1122;EU730894.1/50807-50703 15368:Brachypodium
           distachyon
          Length = 105

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 80  gcgacacttattttggaacggagggagtat 109
           ||||||||||||||||| |||||| |||||
Sbjct: 33  gcgacacttattttggatcggaggtagtat 4




>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa
          Japonica Group
          Length = 162

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atactccctctgtcccaaaata 31
          ||||||||||||||||||||||
Sbjct: 4  atactccctctgtcccaaaata 25




>RF00906;MIR1122;AAAA02034559.1/3133-3272 39946:Oryza sativa Indica
           Group
          Length = 140

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 88  tattttggaacggagggagtat 109
           ||||||||||||||||||||||
Sbjct: 25  tattttggaacggagggagtat 4




>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
           Group
          Length = 160

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 87  ttattttggaacggagggagtatata 112
           ||||||||| ||||||||||||||||
Sbjct: 26  ttattttgggacggagggagtatata 1




>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
           Japonica Group
          Length = 92

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 84  cacttattttggaacggagggagtat 109
           |||||||||||| |||||||||||||
Sbjct: 29  cacttattttgggacggagggagtat 4



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 10 atactccctctgtcccaaaataagtg 35
          |||||||||| |||||||||||||||
Sbjct: 4  atactccctccgtcccaaaataagtg 29




>RF00906;MIR1122;AACV01008275.1/11041-11180 39947:Oryza sativa
           Japonica Group
          Length = 140

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 88  tattttggaacggagggagtat 109
           ||||||||||||||||||||||
Sbjct: 25  tattttggaacggagggagtat 4




>RF00906;MIR1122;AP005108.2/31586-31696 39947:Oryza sativa Japonica
           Group
          Length = 111

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 87  ttattttggaacggagggagtatata 112
           ||||||||| ||||||||||||||||
Sbjct: 86  ttattttggtacggagggagtatata 111




>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
           Japonica Group
          Length = 121

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  tactccctctgtcccaaaataa 32
           ||||||||||||||||||||||
Sbjct: 117 tactccctctgtcccaaaataa 96




>RF00906;MIR1122;AACV01015822.1/5399-5292 39947:Oryza sativa
          Japonica Group
          Length = 108

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 atactccctctgtcccaaaata 31
          ||||||||||||||||||||||
Sbjct: 4  atactccctctgtcccaaaata 25




>RF00906;MIR1122;AACV01008813.1/4556-4689 39947:Oryza sativa
           Japonica Group
          Length = 134

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 88  tattttggaacggagggagtat 109
           ||||||||||||||||||||||
Sbjct: 25  tattttggaacggagggagtat 4




>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
           Japonica Group
          Length = 95

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 88  tattttggaacggagggagtat 109
           ||||||||||||||||||||||
Sbjct: 71  tattttggaacggagggagtat 92