miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01059;mir-598;AAPU01011496.1/32655-32791 7230:Drosophila
          mojavensis
          Length = 137

 Score = 50.1 bits (25), Expect = 8e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 71 ctgttgctgctgctgctgttgctgc 95
          |||||||||||||||||||||||||
Sbjct: 18 ctgttgctgctgctgctgttgctgc 42




>RF01059;mir-598;AANI01016567.1/8163-8034 7244:Drosophila virilis
          Length = 130

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 72 tgttgctgctgctgctgttgctgc 95
          ||||||||||||||||||||||||
Sbjct: 25 tgttgctgctgctgctgttgctgc 48




>RF01059;mir-598;AAPU01009258.1/12685-12780 7230:Drosophila
          mojavensis
          Length = 96

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 72 tgttgctgctgctgctgttgctg 94
          |||||||||||||||||||||||
Sbjct: 1  tgttgctgctgctgctgttgctg 23




>RF01059;mir-598;AAEU02000204.1/890859-890965 7245:Drosophila
          yakuba
          Length = 107

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 73 gttgctgctgctgctgttgctg 94
          ||||||||||||||||||||||
Sbjct: 2  gttgctgctgctgctgttgctg 23