miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01059;mir-598;AASC02032772.1/1063-1160 6500:Aplysia californica
(California sea hare)
Length = 98
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 91 tattattattgatgttgttgttgctgttgtt 121
||||||||||| ||||||||||| |||||||
Sbjct: 98 tattattattgttgttgttgttgttgttgtt 68
>RF01059;mir-598;AABR04091048.1/7429-7552 10116:Rattus norvegicus
(Norway rat)
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 91 tattattattgatgttgttgttgctgttgtt 121
||||||||||| ||||||||||| |||||||
Sbjct: 89 tattattattgttgttgttgttgttgttgtt 59
>RF01059;mir-598;AAPU01009718.1/13748-13635 7230:Drosophila
mojavensis
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 99 ttgatgttgttgttgctgttgtt 121
|||||||||||||||||||||||
Sbjct: 109 ttgatgttgttgttgctgttgtt 87
>RF01059;mir-598;AAPT01021249.1/35998-35899 7222:Drosophila
grimshawi
Length = 100
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 100 tgatgttgttgttgctgttgtt 121
||||||||||||||||||||||
Sbjct: 16 tgatgttgttgttgctgttgtt 37
