miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00952;mir-650;AK129585.1/1-79 9606:Homo sapiens (human)
Length = 79
Score = 95.6 bits (48), Expect = 6e-20
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 5 tcaggaggcagcgctctcgggacatctccaccatggcctgggctctgctcctcctcaccc 64
||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 8 tcaggaggcagcgctctcgggacgtctccgccatggcctgggctctgctgctcctcaccc 67
>RF00952;mir-650;AANU01210640.1/17305-17211 9544:Macaca mulatta
(rhesus monkey)
Length = 95
Score = 87.7 bits (44), Expect = 1e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 5 tcaggaggcagcgctctcgggacatctccaccatggcctgggctctgctcctcctcaccc 64
||||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 14 tcaggagacagtgctgtcgggacgtctccaccatggcctgggctctgctcctcctcaccc 73
>RF00952;mir-650;AAPE01597063.1/4995-4901 59463:Myotis lucifugus
(little brown bat)
Length = 95
Score = 81.8 bits (41), Expect = 9e-16
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 5 tcaggaggcagcgctctcgggacatctccaccatggcctgggctctgctcctcctca 61
|||| ||||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 14 tcagaaggcagcgctctcagggcacctccaccatggcctgggctctgctcctcctca 70
>RF00952;mir-650;AANU01210643.1/9228-9138 9544:Macaca mulatta
(rhesus monkey)
Length = 91
Score = 75.8 bits (38), Expect = 5e-14
Identities = 54/59 (91%), Gaps = 4/59 (6%)
Strand = Plus / Plus
Query: 4 gtcaggaggcagcgctctcgggacatctccaccatggcctgggctctgctcctcctcac 62
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 13 gtcaggaggcagcgctctcag----tctccaccatggcctgggctctgctcctcctcac 67
>RF00952;mir-650;AAWR02038310.1/87959-87865 9796:Equus caballus
(horse)
Length = 95
Score = 73.8 bits (37), Expect = 2e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 12 gcagcgctctcgggacatctccaccatggcctgggctctgctcctcctcaccc 64
|||| ||||| ||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 21 gcagtgctcttggggcgtctccaccatggcctgggctctgctcctcctcaccc 73
>RF00952;mir-650;AAPY01440642.1/1292-1385 37347:Tupaia belangeri
(northern tree shrew)
Length = 94
Score = 71.9 bits (36), Expect = 9e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 29 tctccaccatggcctgggctctgctcctcctcaccc 64
||||||||||||||||||||||||||||||||||||
Sbjct: 37 tctccaccatggcctgggctctgctcctcctcaccc 72
>RF00952;mir-650;AACZ02233323.1/2086-1994 9598:Pan troglodytes
(chimpanzee)
Length = 93
Score = 71.9 bits (36), Expect = 9e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 18 ctctcgggacatctccaccatggcctgggctctgctcctcctca 61
|||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 26 ctctggggacgtctccaccatggcctgggctctgctcctcctca 69
>RF00952;mir-650;AAGW01499587.1/2632-2723 9986:Oryctolagus
cuniculus (rabbit)
Length = 92
Score = 65.9 bits (33), Expect = 5e-11
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 5 tcaggaggcagcgctctcgggacatctccaccatggcctgggctctgctcctcctcaccc 64
|||||||||||| ||| ||| | ||| ||||||||||||||||||||||||||||||||
Sbjct: 13 tcaggaggcagc--tctgggggcgtctgcaccatggcctgggctctgctcctcctcaccc 70
>RF00952;mir-650;AAGV020034474.1/1514-1420 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 95
Score = 61.9 bits (31), Expect = 8e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 18 ctctcgggacatctccaccatggcctgggctctgctcctcctcaccc 64
|||| ||| ||| ||||||||||||||||||||||||||||| ||||
Sbjct: 27 ctcttggggcatatccaccatggcctgggctctgctcctccttaccc 73
>RF00952;mir-650;ABDC01347843.1/2261-2349 30608:Microcebus murinus
(gray mouse lemur)
Length = 89
Score = 61.9 bits (31), Expect = 8e-10
Identities = 47/51 (92%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 10 aggcagcgctctcgggacatctccaccatggcctgggctctgctcctcctc 60
|||||||||||| ||| | ||||||||| ||||||||||||||||||||||
Sbjct: 14 aggcagcgctctgggg-cgtctccaccacggcctgggctctgctcctcctc 63
>RF00952;mir-650;AAGV020710538.1/2448-2354 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 95
Score = 60.0 bits (30), Expect = 3e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 17 gctctcgggacatctccaccatggcctgggctctgctcctcctcac 62
||||| ||||||||||||||||||||||| ||| |||||||||||
Sbjct: 26 gctctggggacatctccaccatggcctggactcccctcctcctcac 71
>RF00952;mir-650;AAWR02038310.1/76191-76097 9796:Equus caballus
(horse)
Length = 95
Score = 60.0 bits (30), Expect = 3e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctcctcaccc 64
||||||||||||||||| || |||||||||||||||||
Sbjct: 36 catctccaccatggccttggttctgctcctcctcaccc 73
>RF00952;mir-650;AANN01442391.1/982-1071 9365:Erinaceus europaeus
(western European hedgehog)
Length = 90
Score = 60.0 bits (30), Expect = 3e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctcctcaccc 64
||||||||||||||||||||| |||||| |||||||||
Sbjct: 31 catctccaccatggcctgggccctgctcttcctcaccc 68
>RF00952;mir-650;ABRT010277477.1/4788-4881 9478:Tarsius syrichta
(Philippine tarsier)
Length = 94
Score = 60.0 bits (30), Expect = 3e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 5 tcaggaggcagcgctctcgggacatctccaccatggcctgggctctgctcctcctcac 62
|||||||||||| ||| ||| ||||||||||||| ||||||||||||| |||||||
Sbjct: 13 tcaggaggcagcagtcttggggcatctccaccatgacctgggctctgcttttcctcac 70
>RF00952;mir-650;ABRT010402342.1/832-923 9478:Tarsius syrichta
(Philippine tarsier)
Length = 92
Score = 60.0 bits (30), Expect = 3e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctcctcaccc 64
||||||||||||||||||||||||||||| ||| ||||
Sbjct: 33 catctccaccatggcctgggctctgctcccccttaccc 70
>RF00952;mir-650;AANU01210623.1/10437-10347 9544:Macaca mulatta
(rhesus monkey)
Length = 91
Score = 60.0 bits (30), Expect = 3e-09
Identities = 50/56 (89%), Gaps = 3/56 (5%)
Strand = Plus / Plus
Query: 5 tcaggaggcagcgctctcgggacatctccaccatggcctgggctctgctcctcctc 60
||||||||||| |||||| ||||||| ||||| |||||||||||||||||||||
Sbjct: 13 tcaggaggcagagctctcaggacatc---accatagcctgggctctgctcctcctc 65
>RF00952;mir-650;AAWR02038310.1/141035-140941 9796:Equus caballus
(horse)
Length = 95
Score = 58.0 bits (29), Expect = 1e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 28 atctccaccatggcctgggctctgctcctcctcaccc 64
|||||||| ||||||||||||||||||||| ||||||
Sbjct: 37 atctccactatggcctgggctctgctcctcatcaccc 73
>RF00952;mir-650;AANN01840108.1/4686-4777 9365:Erinaceus europaeus
(western European hedgehog)
Length = 92
Score = 58.0 bits (29), Expect = 1e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 24 ggacatctccaccatggcctgggctctgctcctcctcaccc 64
||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 30 ggacatcaccaccatggcctgggctctgctctttctcaccc 70
>RF00952;mir-650;AANN01778356.1/4698-4791 9365:Erinaceus europaeus
(western European hedgehog)
Length = 94
Score = 58.0 bits (29), Expect = 1e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctcctcacc 63
|||||||||||||||||||| ||||||| ||||||||
Sbjct: 35 catctccaccatggcctgggttctgctcttcctcacc 71
>RF00952;mir-650;AAFC03006146.1/17191-17099 9913:Bos taurus
(cattle)
Length = 93
Score = 58.0 bits (29), Expect = 1e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctcctcacc 63
|||||||||||||| |||||||||||||||| |||||
Sbjct: 34 catctccaccatggtctgggctctgctcctcatcacc 70
>RF00952;mir-650;ACBE01380695.1/14347-14253 9685:Felis catus
(domestic cat)
Length = 95
Score = 58.0 bits (29), Expect = 1e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 5 tcaggaggcagcgctctcgggacatctccaccatggcctgggctctgctcctcctca 61
|||| |||||| ||| | ||| ||||| ||||||||||||||||||| |||||||||
Sbjct: 14 tcagaaggcagtgctgttggggcatctgcaccatggcctgggctctggtcctcctca 70
>RF00952;mir-650;AACN010127126.1/1088-994 9615:Canis lupus
familiaris (dog)
Length = 95
Score = 58.0 bits (29), Expect = 1e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctcctcacc 63
||||||||||||||||||| ||||| |||||||||||
Sbjct: 36 catctccaccatggcctggactctggtcctcctcacc 72
>RF00952;mir-650;ABRN01253218.1/12975-13067 9739:Tursiops
truncatus (bottlenosed dolphin)
Length = 93
Score = 56.0 bits (28), Expect = 5e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 29 tctccaccatggcctgggctctgctcct 56
||||||||||||||||||||||||||||
Sbjct: 36 tctccaccatggcctgggctctgctcct 63
>RF00952;mir-650;ABRT010825472.1/1666-1572 9478:Tarsius syrichta
(Philippine tarsier)
Length = 95
Score = 56.0 bits (28), Expect = 5e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 29 tctccaccatggcctgggctctgctcctcctcaccc 64
||||||||| ||||||| ||||||||||||||||||
Sbjct: 38 tctccaccacggcctggcctctgctcctcctcaccc 73
>RF00952;mir-650;AANU01210692.1/6129-6039 9544:Macaca mulatta
(rhesus monkey)
Length = 91
Score = 56.0 bits (28), Expect = 5e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 29 tctccaccatggcctgggctctgctcctcctcaccc 64
||||||||||||||||||||| |||||||||||||
Sbjct: 34 tctccaccatggcctgggctccactcctcctcaccc 69
>RF00952;mir-650;AAWR02038310.1/54887-54794 9796:Equus caballus
(horse)
Length = 94
Score = 54.0 bits (27), Expect = 2e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 29 tctccaccatggcctgggctctgctcctcctcacc 63
|||||||||||||| | ||||||||||||||||||
Sbjct: 37 tctccaccatggccagtgctctgctcctcctcacc 71
>RF00952;mir-650;AAWR02042338.1/76049-75957 9796:Equus caballus
(horse)
Length = 93
Score = 54.0 bits (27), Expect = 2e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctc 57
||||||||||||||||||||||| |||||||
Sbjct: 35 catctccaccatggcctgggctccgctcctc 65
>RF00952;mir-650;AAFC03006141.1/4400-4308 9913:Bos taurus (cattle)
Length = 93
Score = 54.0 bits (27), Expect = 2e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 29 tctccaccatggcctgggctctgctcctcctcacc 63
||||||||||| ||||||||||||||||| |||||
Sbjct: 36 tctccaccatgtcctgggctctgctcctcatcacc 70
>RF00952;mir-650;AAQR01429354.1/638-549 30611:Otolemur garnettii
(small-eared galago)
Length = 90
Score = 54.0 bits (27), Expect = 2e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 30 ctccaccatggcctgggctctgctcctcctcaccc 64
|||||||||||||| ||||||| ||||||||||||
Sbjct: 34 ctccaccatggcctaggctctggtcctcctcaccc 68
>RF00952;mir-650;ABVD01805881.1/404-310 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 95
Score = 52.0 bits (26), Expect = 8e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 10 aggcagcgctctcgggacatctccaccatggcctgggctctgctcctcct 59
||||||| || | ||| ||||||||||||||||||| |||| ||||||||
Sbjct: 19 aggcagcacttttggggcatctccaccatggcctggcctctcctcctcct 68
>RF00952;mir-650;ABVD01676966.1/1117-1026 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 92
Score = 52.0 bits (26), Expect = 8e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 5 tcaggaggcagcgctctcgggacatctccaccatggcc 42
||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 13 tcaggaggcagagctctgggggcatctccaccatggcc 50
>RF00952;mir-650;ACBE01380675.1/5588-5682 9685:Felis catus
(domestic cat)
Length = 95
Score = 52.0 bits (26), Expect = 8e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctcctcaccc 64
||||||||||||||||||| ||||| |||| |||||||
Sbjct: 36 catctccaccatggcctggactctgatccttctcaccc 73
>RF00952;mir-650;AACN010976540.1/395-303 9615:Canis lupus
familiaris (dog)
Length = 93
Score = 52.0 bits (26), Expect = 8e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 32 ccaccatggcctgggctctgctcctcctca 61
||||||||||||||||||||||| ||||||
Sbjct: 41 ccaccatggcctgggctctgctcatcctca 70
>RF00952;mir-650;AAPY01472742.1/638-730 37347:Tupaia belangeri
(northern tree shrew)
Length = 93
Score = 52.0 bits (26), Expect = 8e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 29 tctccaccatggcctgggctctgctcctcctcac 62
||||||||||||||||| ||||| ||||||||||
Sbjct: 36 tctccaccatggcctggactctgttcctcctcac 69
>RF00952;mir-650;ABVD01470222.1/504-413 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 92
Score = 50.1 bits (25), Expect = 3e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 30 ctccaccatggcctgggctctgctcctcctcac 62
|||||||||||||||||||| |||||||||||
Sbjct: 36 ctccaccatggcctgggctcccctcctcctcac 68
>RF00952;mir-650;ABRP01258622.1/6464-6373 132908:Pteropus vampyrus
(large flying fox)
Length = 92
Score = 50.1 bits (25), Expect = 3e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctcctcacc 63
||||||||||||||||||| | || ||||||||||||
Sbjct: 33 catctccaccatggcctggtcccttctcctcctcacc 69
>RF00952;mir-650;ABRT010222590.1/32-125 9478:Tarsius syrichta
(Philippine tarsier)
Length = 94
Score = 50.1 bits (25), Expect = 3e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctcct 59
||||||||||||||| |||||||||| ||||||
Sbjct: 35 catctccaccatggcttgggctctgcccctcct 67
>RF00952;mir-650;AAKN02007211.1/26174-26084 10141:Cavia porcellus
(domestic guinea pig)
Length = 91
Score = 50.1 bits (25), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 18 ctctcgggacatctccaccatggcctgggctctgctcctcctcac 62
|||| ||| ||||||||||||||||| ||||||||| || |||||
Sbjct: 23 ctcttggggcatctccaccatggcctaggctctgcttctgctcac 67
>RF00952;mir-650;AAGV020535791.1/850-755 9361:Dasypus novemcinctus
(nine-banded armadillo)
Length = 96
Score = 48.1 bits (24), Expect = 1e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 17 gctctcgggacatctccaccatggcctgggctctgctcctcctc 60
||||| ||| ||||||||||||||||||| ||| |||||||||
Sbjct: 27 gctctgggggcatctccaccatggcctggactcccctcctcctc 70
>RF00952;mir-650;AAWR02038312.1/165638-165549 9796:Equus caballus
(horse)
Length = 90
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 acatctccaccatggcctgggctc 49
||||||||||||||||||||||||
Sbjct: 30 acatctccaccatggcctgggctc 53
>RF00952;mir-650;AAPY01472734.1/397-304 37347:Tupaia belangeri
(northern tree shrew)
Length = 94
Score = 48.1 bits (24), Expect = 1e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctcctcac 62
|||||||| ||||||| || ||||||||||||||||
Sbjct: 35 catctccaacatggcccggactctgctcctcctcac 70
>RF00952;mir-650;AAQR01447121.1/1441-1530 30611:Otolemur garnettii
(small-eared galago)
Length = 90
Score = 48.1 bits (24), Expect = 1e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 31 tccaccatggcctgggctctgctcctcctcac 62
||||||||||||||||||||| |||| |||||
Sbjct: 35 tccaccatggcctgggctctggtccttctcac 66
>RF00952;mir-650;ABQO010464055.1/1652-1559 9315:Macropus eugenii
(tammar wallaby)
Length = 94
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctc 49
|||||||||||||||||||||||
Sbjct: 35 catctccaccatggcctgggctc 57
>RF00952;mir-650;AAGV020317007.1/1444-1537 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 94
Score = 46.1 bits (23), Expect = 5e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 18 ctctcgggacatctccaccatggcctgggctctgctcctcctcaccc 64
|||| |||||||||||| |||||||||| | | |||||||||||||
Sbjct: 26 ctctggggacatctccatcatggcctggacccctctcctcctcaccc 72
>RF00952;mir-650;AAWR02038309.1/73960-73870 9796:Equus caballus
(horse)
Length = 91
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 gggacatctccaccatggcctgg 45
|||||||||||||||||||||||
Sbjct: 28 gggacatctccaccatggcctgg 50
>RF00952;mir-650;AAPE01308308.1/1256-1162 59463:Myotis lucifugus
(little brown bat)
Length = 95
Score = 46.1 bits (23), Expect = 5e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 30 ctccaccatggcctgggctctgctcctcctcaccc 64
|||||||||||||||||| | |||||||||||||
Sbjct: 39 ctccaccatggcctgggcccctctcctcctcaccc 73
>RF00952;mir-650;ABRP01240163.1/9497-9585 132908:Pteropus vampyrus
(large flying fox)
Length = 89
Score = 46.1 bits (23), Expect = 5e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 29 tctccaccatggcctgggctctgctcctcctcacc 63
|||| |||||||||||||||| ||||||||||||
Sbjct: 32 tctctaccatggcctgggctcctctcctcctcacc 66
>RF00952;mir-650;ABRP01298648.1/4616-4709 132908:Pteropus vampyrus
(large flying fox)
Length = 94
Score = 46.1 bits (23), Expect = 5e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgct 53
|||||| ||||||||||||||||||||
Sbjct: 35 catctcgaccatggcctgggctctgct 61
>RF00952;mir-650;AAFC03006141.1/7448-7356 9913:Bos taurus (cattle)
Length = 93
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tccaccatggcctgggctctgct 53
|||||||||||||||||||||||
Sbjct: 38 tccaccatggcctgggctctgct 60
>RF00952;mir-650;AC187977.9/45806-45899 9615:Canis lupus
familiaris (dog)
Length = 94
Score = 46.1 bits (23), Expect = 5e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 30 ctccaccatggcctgggctctgctcctcctcaccc 64
|||||||||||||||| ||| |||||||||||||
Sbjct: 38 ctccaccatggcctggtctcctctcctcctcaccc 72
>RF00952;mir-650;ABRT010420629.1/993-902 9478:Tarsius syrichta
(Philippine tarsier)
Length = 92
Score = 46.1 bits (23), Expect = 5e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctc 57
|||| ||||||||||||||||||| ||||||
Sbjct: 36 catccccaccatggcctgggctctactcctc 66
>RF00952;mir-650;AAQQ01193038.1/193-287 43179:Spermophilus
tridecemlineatus (thirteen-lined ground squirrel)
Length = 95
Score = 46.1 bits (23), Expect = 5e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 gggacatctccaccatggcctgg 45
|||||||||||||||||||||||
Sbjct: 32 gggacatctccaccatggcctgg 54
>RF00952;mir-650;ABQO010073391.1/1533-1439 9315:Macropus eugenii
(tammar wallaby)
Length = 95
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 gcagcgctctcgggacatctccaccatggcctgg 45
|||| ||||| ||| |||||||||||||||||||
Sbjct: 21 gcagagctctgggggcatctccaccatggcctgg 54
>RF00952;mir-650;ABVD01369722.1/4512-4604 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 93
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 29 tctccaccatggcctgggctctgctc 54
|||| |||||||||||||||||||||
Sbjct: 37 tctcaaccatggcctgggctctgctc 62
>RF00952;mir-650;AAGV020491641.1/4307-4398 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 92
Score = 44.1 bits (22), Expect = 2e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 5 tcaggaggcagcgctctcgggacatctccaccatggcctgggctctgctcctcctcac 62
|||||| |||| ||||| |||||| |||||||||||||| ||| |||||||||||
Sbjct: 11 tcaggaagcagagctctggggacacttccaccatggcctgaactcccctcctcctcac 68
>RF00952;mir-650;AAWR02044313.1/9443-9535 9796:Equus caballus
(horse)
Length = 93
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 37 atggcctgggctctgctcctcctcac 62
||||||||| ||||||||||||||||
Sbjct: 44 atggcctggtctctgctcctcctcac 69
>RF00952;mir-650;AALT01031995.1/1010-1104 42254:Sorex araneus
(European shrew)
Length = 95
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 31 tccaccatggcctgggctctgctcctcctcaccc 64
||||||||| ||||||||||| || |||||||||
Sbjct: 40 tccaccatgacctgggctctgttcatcctcaccc 73
>RF00952;mir-650;AAFC03005562.1/1529-1438 9913:Bos taurus (cattle)
Length = 92
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcct 56
||||||| ||||||||||||||||| ||||
Sbjct: 33 catctccgccatggcctgggctctgttcct 62
>RF00952;mir-650;ACBE01380689.1/6518-6425 9685:Felis catus
(domestic cat)
Length = 94
Score = 44.1 bits (22), Expect = 2e-04
Identities = 37/41 (90%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 5 tcaggaggcagcgctctcgggacatctccaccatggcctgg 45
||||||||||| ||||| || |||||||||||||||||||
Sbjct: 15 tcaggaggcagagctctggg--catctccaccatggcctgg 53
>RF00952;mir-650;AAPY01513208.1/576-668 37347:Tupaia belangeri
(northern tree shrew)
Length = 93
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 29 tctccaccatggcctgggctctgctcctcctcac 62
||||||||||||||||| |||| ||||||||||
Sbjct: 36 tctccaccatggcctggattctgttcctcctcac 69
>RF00952;mir-650;ABRT010484678.1/2677-2771 9478:Tarsius syrichta
(Philippine tarsier)
Length = 95
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 28 atctccaccatggcctgggctctgctcctc 57
|||||||||||| ||||| |||||||||||
Sbjct: 37 atctccaccatgacctggcctctgctcctc 66
>RF00952;mir-650;AAGV020524952.1/768-674 9361:Dasypus novemcinctus
(nine-banded armadillo)
Length = 95
Score = 42.1 bits (21), Expect = 8e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctcct 59
||||||||||||||||||| ||| ||||||||
Sbjct: 36 catctccaccatggcctggactcccctcctcct 68
>RF00952;mir-650;AAGV020522614.1/3113-3205 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 93
Score = 42.1 bits (21), Expect = 8e-04
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 12 gcagcgctctcgggacatctccaccatggcctgggctctgctcctcctcaccc 64
|||| ||||| ||| || ||||||| |||||||| ||| |||||||||||||
Sbjct: 19 gcagagctctgggggcacctccaccgtggcctggactcccctcctcctcaccc 71
>RF00952;mir-650;AAGV020624151.1/4915-4821 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 95
Score = 42.1 bits (21), Expect = 8e-04
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 7 aggaggcagcgctctcgggacatctccaccatggcctgggctctgctcctcct 59
|||| |||| ||||| ||| |||||||||||||||||| ||| ||||||||
Sbjct: 16 aggaagcagagctctgggggtatctccaccatggcctggactcccctcctcct 68
>RF00952;mir-650;AAGV020726706.1/1265-1355 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 91
Score = 42.1 bits (21), Expect = 8e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 29 tctccaccatggcctgggctctgctcctcctca 61
||||||||||||||||| ||| ||||||||||
Sbjct: 34 tctccaccatggcctggactcccctcctcctca 66
>RF00952;mir-650;AAGV020747787.1/2567-2473 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 95
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 17 gctctcgggacatctccaccatggcctgg 45
||||| ||| |||||||||||||||||||
Sbjct: 26 gctctgggggcatctccaccatggcctgg 54
>RF00952;mir-650;AAWR02038312.1/223659-223569 9796:Equus caballus
(horse)
Length = 91
Score = 42.1 bits (21), Expect = 8e-04
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 5 tcaggaggcagcgctctcgggacatctccaccatggcctgggctc 49
||||||||||| || || ||| |||||||||||||| ||||||||
Sbjct: 13 tcaggaggcagagc-ctgggggcatctccaccatggtctgggctc 56
>RF00952;mir-650;AAWR02038310.1/9400-9307 9796:Equus caballus
(horse)
Length = 94
Score = 42.1 bits (21), Expect = 8e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 9 gaggcagcgctctcgggacatctccaccatggcctgg 45
||||||| ||||| ||| |||||||||||||||||||
Sbjct: 18 gaggcagagctctgggg-catctccaccatggcctgg 53
>RF00952;mir-650;AAWR02021026.1/71268-71361 9796:Equus caballus
(horse)
Length = 94
Score = 42.1 bits (21), Expect = 8e-04
Identities = 37/41 (90%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 5 tcaggaggcagcgctctcgggacatctccaccatggcctgg 45
||||||||||| ||||| ||| |||||||||||| ||||||
Sbjct: 14 tcaggaggcagagctctgggg-catctccaccatagcctgg 53
>RF00952;mir-650;AANN01593092.1/3646-3738 9365:Erinaceus europaeus
(western European hedgehog)
Length = 93
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 33 caccatggcctgggctctgctcctcctca 61
||||||||||||| ||||||||||||||
Sbjct: 40 caccatggcctggaatctgctcctcctca 68
>RF00952;mir-650;ACBE01380694.1/5722-5629 9685:Felis catus
(domestic cat)
Length = 94
Score = 42.1 bits (21), Expect = 8e-04
Identities = 37/41 (90%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 5 tcaggaggcagcgctctcgggacatctccaccatggcctgg 45
||||||||||| |||||| || ||||||| |||||||||||
Sbjct: 14 tcaggaggcagagctctctgg-catctcctccatggcctgg 53
>RF00952;mir-650;ABRT010346061.1/8292-8386 9478:Tarsius syrichta
(Philippine tarsier)
Length = 95
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 37 atggcctgggctctgctcctc 57
|||||||||||||||||||||
Sbjct: 46 atggcctgggctctgctcctc 66
>RF00952;mir-650;ABGA01252243.1/34114-34025 9601:Pongo abelii
(Sumatran orangutan)
Length = 90
Score = 42.1 bits (21), Expect = 8e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 27 catctccaccatggcctgggctctgctcctcctcacc 63
||||||||||||| |||||| | |||| |||||||||
Sbjct: 31 catctccaccatgacctgggttgtgcttctcctcacc 67
>RF00952;mir-650;CABD01001759.1/1064-974 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 91
Score = 42.1 bits (21), Expect = 8e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 9 gaggcagcgctctcgggacatctccaccatggcctgg 45
||||||| ||||| ||| |||||||||||||||||||
Sbjct: 15 gaggcagagctctgggg-catctccaccatggcctgg 50
