miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: AAAAGCATCAGGAAGTACCCA

selected species: Homo sapiens



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM569186 AAAAGCATCAGGAAGTACCCA GGCCCTTCTTGATGCTCTTGA up 3 0


Secondary structure

TTAACCAGTTCTTCTGCAGACAAAAGCATCAGGAAGTACCCACCATGTACCAGTGGGCCCTTCTTGATGCTCTTGATTGCAGAGGAGCCCTGCA
--------------------CAAAAGCATCAGGAAGTACCCA 	1
---------------------AAAAGCATCAGGAAGTACCCAC 	3
---------------------AAAAGCATCAGGAAGTACCC 	1
---------------------AAAAGCATCAGGAAGTACCCA 	8
----------------------AAAGCATCAGGAAGTACCCA 	1

Overlaps with: MNEST029617
Overlaps with miRBase pre-miRNAs: hsa-mir-4422
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Homo sapiens GSM569187 AAAAGCATCAGGAAGTACCCA GGCCCTTCTTGATGCTCTTGA up 3 0


Secondary structure

TTAACCAGTTCTTCTGCAGACAAAAGCATCAGGAAGTACCCACCATGTACCAGTGGGCCCTTCTTGATGCTCTTGATTGCAGAGGAGCCCTGCA
---------------------AAAAGCATCAGGAAGTACCCA 	9
--------------------------------------------------------GCCCTTCTTGATGCTCTTGAT 	1
--------------------------------------------------------GCCCTTCTTGATGCTCTTGA 	1

Overlaps with: MNEST029617
Overlaps with miRBase pre-miRNAs: hsa-mir-4422
HuntMi prediction: true miRNA