miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: AAAGAATAGAAAATCGAAGGTG

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant AAAGAATAGAAAATCGAAGGTG CCTTCGATTTTCTATCCTTTTA down 1 0


Secondary structure

ATACTGCTATCGGTCTCTCTTACCTTCGATTTTCTATCCTTTTATAATTTTTGGAATAAAAGAATAGAAAATCGAAGGTGAGATGGACCGAGGAACTTC
---------------------------------------------------------AAAAGAATAGAAAATCGAAGGTG 	21
---------------------------------------------------------AAAAGAATAGAAAATCGAAGGT 	5
----------------------------------------------------------AAAGAATAGAAAATCGAAGGTGA 	3
----------------------------------------------------------AAAGAATAGAAAATCGAAGGTG 	1962
----------------------------------------------------------AAAGAATAGAAAATCGAAGGT 	25
----------------------------------------------------------AAAGAATAGAAAATCGAAGG 	6
-----------------------------------------------------------AAGAATAGAAAATCGAAGGTG 	8

Overlaps with: MNEST035112
Overlaps with miRBase pre-miRNAs: api-mir-3018
HuntMi prediction: true miRNA