miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: AAAGACGTAAATGTTACCTGCG

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant AAAGACGTAAATGTTACCTGCG ATTGGTAACATCAACCTCTTTAG down 5 1


Secondary structure

ATCATATTTATGGTGTACGCCGATTGGTAACATCAACCTCTTTAGCGAATATTTGACGCACTAAAGACGTAAATGTTACCTGCGGAGTTCCCATGAACTATCG
----------------------ATTGGTAACATCAACCTCTTTAG 	4
----------------------ATTGGTAACATCAACCTCTTTA 	1
--------------------------------------------------------------AAAGACGTAAATGTTACCTGCG 	5

Overlaps with: MNEST035123
Overlaps with miRBase pre-miRNAs: api-mir-3029
HuntMi prediction: true miRNA