miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: AACCAGATGTTGTAAGAACGA

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant AACCAGATGTTGTAAGAACGA GTTCTTACAATTGCCGGTTAA down 5 0


Secondary structure

ACACTTAGAGCTGTTCTTACAATTGCCGGTTAAGTGTCGATTAACTTTAACCAGATGTTGTAAGAACGACCCTTAATG
-----------TGTTCTTACAATTGCCGGTTAA 	4
------------------------------------------------AACCAGATGTTGTAAGAACGA 	9
------------------------------------------------AACCAGATGTTGTAAGAACGAC 	1

Overlaps with: MNEST035105 MNEST035106
Overlaps with miRBase pre-miRNAs: api-mir-3015c
HuntMi prediction: true miRNA