miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



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selected mature miRNA sequence: AAGAGAGCTATCCGTCGACAGT

selected species: Drosophila melanogaster



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM385821-16268 AAGAGAGCTATCCGTCGACAGT TGTCATGGAATTGCTCTCTTTG up 2 2


Secondary structure

CGCTTTCAGATCCTCCGCGAATTGTGAAATGAAGAGAGCTATCCGTCGACAGTCAAGTTAAGACCGATTGTAATACTGTCATGGAATTGCTCTCTTTGTATAACATTCGAAAGGCGACGATTATAA
-------------------------------AAGAGAGCTATCCGTCGACAGT 	111
-------------------------------AAGAGAGCTATCCGTCGACAG 	27
-------------------------------AAGAGAGCTATCCGTCGACA 	11
-----------------------------------------------GACAGTCAAGTTAAGACCGATTGTA 	1
---------------------------------------------------------------------------CTGTCATGGAATTGCTCTCTTTG 	45
-----------------------------------------------------------------------------GTCATGGAATTGCTCTCTTTGT 	1

Overlaps with: MNEST036426 MNEST036427 MNEST037162
Overlaps with miRBase pre-miRNAs: dme-mir-281-2 dse-mir-281-2
HuntMi prediction: true miRNA