miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: AAGGTAGATAGAACAGGTCTTG

selected species: Mus musculus

23 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Mus musculus	GSM527274-2107	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTG 	1
-------------------AAAAGGTAGATAGAACAGGTCTT 	4
--------------------AAAGGTAGATAGAACAGGTCTTG 	10
--------------------AAAGGTAGATAGAACAGGTCTT 	8
--------------------AAAGGTAGATAGAACAGGTCT 	1
--------------------AAAGGTAGATAGAACAGGTCTTGT 	2
---------------------AAGGTAGATAGAACAGGTCTT 	311
---------------------AAGGTAGATAGAACAGGTCTTG 	1199
---------------------AAGGTAGATAGAACAGGTCTTGTT 	12
---------------------AAGGTAGATAGAACAGGTCT 	33
---------------------AAGGTAGATAGAACAGGTC 	7
---------------------AAGGTAGATAGAACAGGTCTTGT 	758
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	1
----------------------AGGTAGATAGAACAGGTCTTGTT 	41
----------------------AGGTAGATAGAACAGGTCTTG 	217
----------------------AGGTAGATAGAACAGGTCTTGT 	142
----------------------AGGTAGATAGAACAGGTCTT 	22
----------------------AGGTAGATAGAACAGGTCTTGTTT 	5
-----------------------GGTAGATAGAACAGGTCTT 	1
-----------------------GGTAGATAGAACAGGTCTTGTT 	1
-----------------------GGTAGATAGAACAGGTCTTG 	12
-----------------------GGTAGATAGAACAGGTCTTGT 	1
------------------------GTAGATAGAACAGGTCTTGT 	1
-------------------------TAGATAGAACAGGTCTTGT 	1
---------------------------------------------------------TCAAGACCTACTTATCTACC 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAACA 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAAC 	2
-----------------------------------------------------------AAGACCTACTTATCTACCAACAG 	1
-----------------------------------------------------------AAGACCTACTTATCTACCAACAGC 	1
-----------------------------------------------------------AAGACCTACTTATCTACCAACA 	1
------------------------------------------------------------AGACCTACTTATCTACCAA 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGCC 	5
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	128
------------------------------------------------------------AGACCTACTTATCTACCAACA 	67
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	112
------------------------------------------------------------AGACCTACTTATCTACCAAC 	12
-------------------------------------------------------------GACCTACTTATCTACCAACAGC 	4
-------------------------------------------------------------GACCTACTTATCTACCAACAG 	1
--------------------------------------------------------------ACCTACTTATCTACCAACAG 	1
---------------------------------------------------------------CCTACTTATCTACCAACAG 	11

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Mus musculus	GSM527280	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGT 	1
-------------------AAAAGGTAGATAGAACAGGTCTTG 	1
-------------------AAAAGGTAGATAGAACAGGTCTT 	1
--------------------AAAGGTAGATAGAACAGGTCTTG 	7
--------------------AAAGGTAGATAGAACAGGTCTT 	1
--------------------AAAGGTAGATAGAACAGGTCTTGTT 	1
--------------------AAAGGTAGATAGAACAGGTCTTGT 	3
---------------------AAGGTAGATAGAACAGGTCTTGT 	521
---------------------AAGGTAGATAGAACAGGTCTT 	268
---------------------AAGGTAGATAGAACAGGTCTTGTT 	9
---------------------AAGGTAGATAGAACAGGTCT 	30
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	2
---------------------AAGGTAGATAGAACAGGTC 	7
---------------------AAGGTAGATAGAACAGGTCTTG 	818
----------------------AGGTAGATAGAACAGGTCTTGTTT 	3
----------------------AGGTAGATAGAACAGGTCT 	1
----------------------AGGTAGATAGAACAGGTCTTGTT 	16
----------------------AGGTAGATAGAACAGGTCTTG 	117
----------------------AGGTAGATAGAACAGGTCTTGT 	91
----------------------AGGTAGATAGAACAGGTCTT 	14
-----------------------GGTAGATAGAACAGGTCTTGTT 	1
-----------------------GGTAGATAGAACAGGTCTTG 	1
-----------------------GGTAGATAGAACAGGTCTTGT 	3
------------------------GTAGATAGAACAGGTCTTG 	1
------------------------GTAGATAGAACAGGTCTTGT 	1
-------------------------TAGATAGAACAGGTCTTGT 	1
---------------------------------------------------------TCAAGACCTACTTATCTACCA 	1
-----------------------------------------------------------AAGACCTACTTATCTACCAACAGC 	1
-----------------------------------------------------------AAGACCTACTTATCTACCAACA 	2
------------------------------------------------------------AGACCTACTTATCTACCAACA 	64
------------------------------------------------------------AGACCTACTTATCTACCAA 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	142
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	110
------------------------------------------------------------AGACCTACTTATCTACCAACAGCC 	10
------------------------------------------------------------AGACCTACTTATCTACCAAC 	22
-------------------------------------------------------------GACCTACTTATCTACCAACAGC 	1
-------------------------------------------------------------GACCTACTTATCTACCAACAG 	1
--------------------------------------------------------------ACCTACTTATCTACCAACAG 	4
---------------------------------------------------------------CCTACTTATCTACCAACAG 	9

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Mus musculus	GSM539868	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
--------------------AAAGGTAGATAGAACAGGTCTTG 	7
--------------------AAAGGTAGATAGAACAGGT 	1
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	1
---------------------AAGGTAGATAGAACAGGTCTTGTT 	36
---------------------AAGGTAGATAGAACAGGTCTTGT 	280
---------------------AAGGTAGATAGAACAGGTCTTG 	535
---------------------AAGGTAGATAGAACAGGTCTT 	99
---------------------AAGGTAGATAGAACAGGTCT 	9
---------------------AAGGTAGATAGAACAGGTC 	6
----------------------AGGTAGATAGAACAGGTCTTGTTT 	6
----------------------AGGTAGATAGAACAGGTCTTGTT 	26
----------------------AGGTAGATAGAACAGGTCTTGT 	64
----------------------AGGTAGATAGAACAGGTCTTG 	96
----------------------AGGTAGATAGAACAGGTCTT 	14
----------------------AGGTAGATAGAACAGGTCT 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Mus musculus	GSM539877-5198	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCT 	1
-------------------AAAAGGTAGATAGAACAGGTC 	1
--------------------AAAGGTAGATAGAACAGGTCTTGT 	3
--------------------AAAGGTAGATAGAACAGGTCTTG 	9
--------------------AAAGGTAGATAGAACAGGTCTT 	3
--------------------AAAGGTAGATAGAACAGGTCT 	2
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	1
---------------------AAGGTAGATAGAACAGGTCTTGTT 	50
---------------------AAGGTAGATAGAACAGGTCTTGT 	427
---------------------AAGGTAGATAGAACAGGTCTTG 	1594
---------------------AAGGTAGATAGAACAGGTCTT 	241
---------------------AAGGTAGATAGAACAGGTCT 	45
---------------------AAGGTAGATAGAACAGGTC 	25
----------------------AGGTAGATAGAACAGGTCTTGTTT 	25
----------------------AGGTAGATAGAACAGGTCTTGTT 	103
----------------------AGGTAGATAGAACAGGTCTTGT 	223
----------------------AGGTAGATAGAACAGGTCTTG 	271
----------------------AGGTAGATAGAACAGGTCTT 	87
----------------------AGGTAGATAGAACAGGTCT 	8
------------------------------------------------------------AGACCTACTTATCTACCAACA 	1
------------------------------------------------------------AGACCTACTTATCTACCAAC 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Mus musculus	GSM539850	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTG 	5
-------------------AAAAGGTAGATAGAACAGGTCTT 	29
-------------------AAAAGGTAGATAGAACAGGTCT 	7
-------------------AAAAGGTAGATAGAACAGG 	3
-------------------AAAAGGTAGATAGAACAGGTCTTGT 	5
-------------------AAAAGGTAGATAGAACAGGT 	2
-------------------AAAAGGTAGATAGAACAGGTC 	3
--------------------AAAGGTAGATAGAACAGGTCTTGT 	74
--------------------AAAGGTAGATAGAACAGGTCTTG 	196
--------------------AAAGGTAGATAGAACAGGTCTT 	184
--------------------AAAGGTAGATAGAACAGGTC 	8
--------------------AAAGGTAGATAGAACAGGTCT 	32
--------------------AAAGGTAGATAGAACAGGTCTTGTT 	1
---------------------AAGGTAGATAGAACAGGTCTTGTT 	496
---------------------AAGGTAGATAGAACAGGTCTTGT 	12103
---------------------AAGGTAGATAGAACAGGTCTTG 	22978
---------------------AAGGTAGATAGAACAGGTCTT 	9403
---------------------AAGGTAGATAGAACAGGTCT 	1303
---------------------AAGGTAGATAGAACAGGTC 	424
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	4
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	105
----------------------AGGTAGATAGAACAGGTCTTGTTTG 	2
----------------------AGGTAGATAGAACAGGTCTTGTTT 	89
----------------------AGGTAGATAGAACAGGTCTTGTT 	575
----------------------AGGTAGATAGAACAGGTCTTGT 	2075
----------------------AGGTAGATAGAACAGGTCTTG 	3973
----------------------AGGTAGATAGAACAGGTCTT 	1262
----------------------AGGTAGATAGAACAGGTCT 	110
-----------------------GGTAGATAGAACAGGTCTTGTT 	2
-----------------------GGTAGATAGAACAGGTCTTG 	10
-----------------------GGTAGATAGAACAGGTCTT 	1
-----------------------GGTAGATAGAACAGGTCTTGT 	5
---------------------------------------------------------TCAAGACCTACTTATCTACCA 	1
-----------------------------------------------------------AAGACCTACTTATCTACCAACA 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGCC 	3
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	6
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	23
------------------------------------------------------------AGACCTACTTATCTACCAAC 	1
------------------------------------------------------------AGACCTACTTATCTACCAACA 	30
------------------------------------------------------------AGACCTACTTATCTACCAA 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Mus musculus	GSM539835	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTG 	4
-------------------AAAAGGTAGATAGAACAGGTCTT 	2
-------------------AAAAGGTAGATAGAACAGGTCT 	1
-------------------AAAAGGTAGATAGAACAGGTCTTGTT 	2
--------------------AAAGGTAGATAGAACAGGTCTTG 	74
--------------------AAAGGTAGATAGAACAGGTCTT 	42
--------------------AAAGGTAGATAGAACAGGTC 	3
--------------------AAAGGTAGATAGAACAGGTCTTGT 	34
--------------------AAAGGTAGATAGAACAGGTCT 	1
---------------------AAGGTAGATAGAACAGGTCTTGTT 	302
---------------------AAGGTAGATAGAACAGGTCTTGT 	4817
---------------------AAGGTAGATAGAACAGGTCTTG 	11142
---------------------AAGGTAGATAGAACAGGTCTT 	1281
---------------------AAGGTAGATAGAACAGGTCT 	105
---------------------AAGGTAGATAGAACAGGTC 	129
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	19
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	5
----------------------AGGTAGATAGAACAGGTCTTGTTT 	104
----------------------AGGTAGATAGAACAGGTCTTGTT 	484
----------------------AGGTAGATAGAACAGGTCTTGT 	951
----------------------AGGTAGATAGAACAGGTCTTG 	1842
----------------------AGGTAGATAGAACAGGTCTT 	140
----------------------AGGTAGATAGAACAGGTCT 	16
----------------------AGGTAGATAGAACAGGTCTTGTTTG 	2
---------------------------------------------------------TCAAGACCTACTTATCTACCAA 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAA 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	2
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	5
------------------------------------------------------------AGACCTACTTATCTACCAACA 	4

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Mus musculus	GSM527276	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGT 	1
-------------------AAAAGGTAGATAGAACAGGTCTTGT 	2
-------------------AAAAGGTAGATAGAACAGGTCTTG 	1
-------------------AAAAGGTAGATAGAACAGGTCTT 	2
--------------------AAAGGTAGATAGAACAGGTCT 	1
--------------------AAAGGTAGATAGAACAGGTCTT 	2
--------------------AAAGGTAGATAGAACAGGTCTTG 	10
--------------------AAAGGTAGATAGAACAGGTCTTGT 	6
---------------------AAGGTAGATAGAACAGGTCTTGT 	946
---------------------AAGGTAGATAGAACAGGTCTT 	309
---------------------AAGGTAGATAGAACAGGTCTTGTT 	22
---------------------AAGGTAGATAGAACAGGTCT 	25
---------------------AAGGTAGATAGAACAGGTC 	7
---------------------AAGGTAGATAGAACAGGTCTTG 	1399
----------------------AGGTAGATAGAACAGGTCTTGTTT 	4
----------------------AGGTAGATAGAACAGGTCT 	1
----------------------AGGTAGATAGAACAGGTCTTGTT 	47
----------------------AGGTAGATAGAACAGGTCTTG 	238
----------------------AGGTAGATAGAACAGGTCTTGT 	174
----------------------AGGTAGATAGAACAGGTCTT 	20
-----------------------GGTAGATAGAACAGGTCTTGTT 	2
-----------------------GGTAGATAGAACAGGTCTTG 	4
-----------------------GGTAGATAGAACAGGTCTTGT 	4
------------------------GTAGATAGAACAGGTCTTG 	1
------------------------GTAGATAGAACAGGTCTTGT 	2
-------------------------TAGATAGAACAGGTCTTGT 	1
---------------------------------------------------------TCAAGACCTACTTATCTACCAAC 	1
---------------------------------------------------------TCAAGACCTACTTATCTACC 	1
-----------------------------------------------------------AAGACCTACTTATCTACCAACAGC 	2
-----------------------------------------------------------AAGACCTACTTATCTACCAACA 	3
------------------------------------------------------------AGACCTACTTATCTACCAACA 	81
------------------------------------------------------------AGACCTACTTATCTACCAA 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	190
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	151
------------------------------------------------------------AGACCTACTTATCTACCAACAGCC 	4
------------------------------------------------------------AGACCTACTTATCTACCAAC 	17
-------------------------------------------------------------GACCTACTTATCTACCAACAGC 	3
-------------------------------------------------------------GACCTACTTATCTACCAACAG 	3
--------------------------------------------------------------ACCTACTTATCTACCAACAG 	3
--------------------------------------------------------------ACCTACTTATCTACCAACAGC 	2
---------------------------------------------------------------CCTACTTATCTACCAACAG 	14
----------------------------------------------------------------CTACTTATCTACCAACAGC 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Mus musculus	GSM539869	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-----------------TGAAAAGGTAGATAGAACAGGTCTT 	2
-------------------AAAAGGTAGATAGAACAGGTCTTG 	5
-------------------AAAAGGTAGATAGAACAGGTCTT 	11
-------------------AAAAGGTAGATAGAACAGGTCT 	3
-------------------AAAAGGTAGATAGAACAGGTCTTGT 	1
--------------------AAAGGTAGATAGAACAGGTCTTG 	184
--------------------AAAGGTAGATAGAACAGGTCTT 	64
--------------------AAAGGTAGATAGAACAGGTC 	1
--------------------AAAGGTAGATAGAACAGGTCTTGT 	38
--------------------AAAGGTAGATAGAACAGGTCT 	9
--------------------AAAGGTAGATAGAACAGGT 	1
---------------------AAGGTAGATAGAACAGGTCTTGTT 	364
---------------------AAGGTAGATAGAACAGGTCTTGT 	5255
---------------------AAGGTAGATAGAACAGGTCTTG 	21845
---------------------AAGGTAGATAGAACAGGTCTT 	3572
---------------------AAGGTAGATAGAACAGGTCT 	172
---------------------AAGGTAGATAGAACAGGTC 	152
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	4
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	22
----------------------AGGTAGATAGAACAGGTCTTGTTTG 	2
----------------------AGGTAGATAGAACAGGTCTTGTTT 	93
----------------------AGGTAGATAGAACAGGTCTTGTT 	404
----------------------AGGTAGATAGAACAGGTCTTGT 	1098
----------------------AGGTAGATAGAACAGGTCTTG 	2491
----------------------AGGTAGATAGAACAGGTCTT 	486
----------------------AGGTAGATAGAACAGGTCT 	13
----------------------AGGTAGATAGAACAGGTCTTGTTTGC 	1
-----------------------GGTAGATAGAACAGGTCTTGT 	2
-----------------------GGTAGATAGAACAGGTCTTG 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	5
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	5
------------------------------------------------------------AGACCTACTTATCTACCAACA 	3
-------------------------------------------------------------GACCTACTTATCTACCAACAGC 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Mus musculus	GSM539870	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTG 	1
-------------------AAAAGGTAGATAGAACAGGTCT 	3
-------------------AAAAGGTAGATAGAACAGGTC 	1
-------------------AAAAGGTAGATAGAACAGGT 	1
--------------------AAAGGTAGATAGAACAGGTCTTGTT 	1
--------------------AAAGGTAGATAGAACAGGTCTTGT 	20
--------------------AAAGGTAGATAGAACAGGTCTTG 	63
--------------------AAAGGTAGATAGAACAGGTCTT 	32
--------------------AAAGGTAGATAGAACAGGTCT 	4
--------------------AAAGGTAGATAGAACAGGTC 	1
--------------------AAAGGTAGATAGAACAGGT 	1
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	9
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	26
---------------------AAGGTAGATAGAACAGGTCTTGTT 	285
---------------------AAGGTAGATAGAACAGGTCTTGT 	3259
---------------------AAGGTAGATAGAACAGGTCTTG 	8540
---------------------AAGGTAGATAGAACAGGTCTT 	1584
---------------------AAGGTAGATAGAACAGGTCT 	61
---------------------AAGGTAGATAGAACAGGTC 	74
----------------------AGGTAGATAGAACAGGTCTTGTTTG 	1
----------------------AGGTAGATAGAACAGGTCTTGTTT 	53
----------------------AGGTAGATAGAACAGGTCTTGTT 	200
----------------------AGGTAGATAGAACAGGTCTTGT 	655
----------------------AGGTAGATAGAACAGGTCTTG 	1091
----------------------AGGTAGATAGAACAGGTCTT 	244
----------------------AGGTAGATAGAACAGGTCT 	6
-----------------------GGTAGATAGAACAGGTCTTGT 	2
-----------------------------------------------------------AAGACCTACTTATCTACCAACA 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	4
------------------------------------------------------------AGACCTACTTATCTACCAA 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Mus musculus	GSM539849	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTG 	3
-------------------AAAAGGTAGATAGAACAGGTCTT 	12
-------------------AAAAGGTAGATAGAACAGGTCT 	3
-------------------AAAAGGTAGATAGAACAGG 	1
-------------------AAAAGGTAGATAGAACAGGTCTTGT 	1
--------------------AAAGGTAGATAGAACAGGTCTTGT 	32
--------------------AAAGGTAGATAGAACAGGTCTTG 	122
--------------------AAAGGTAGATAGAACAGGTCTT 	102
--------------------AAAGGTAGATAGAACAGGTCT 	31
--------------------AAAGGTAGATAGAACAGGTC 	2
--------------------AAAGGTAGATAGAACAGGTCTTGTTT 	1
--------------------AAAGGTAGATAGAACAGGTCTTGTT 	1
--------------------AAAGGTAGATAGAACAGGT 	2
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	44
---------------------AAGGTAGATAGAACAGGTCTTGTT 	483
---------------------AAGGTAGATAGAACAGGTCTTGT 	8440
---------------------AAGGTAGATAGAACAGGTCTTG 	23108
---------------------AAGGTAGATAGAACAGGTCTT 	5361
---------------------AAGGTAGATAGAACAGGTCT 	678
---------------------AAGGTAGATAGAACAGGTC 	249
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	32
----------------------AGGTAGATAGAACAGGTCTTGTTTG 	13
----------------------AGGTAGATAGAACAGGTCTTGTTT 	146
----------------------AGGTAGATAGAACAGGTCTTGTT 	494
----------------------AGGTAGATAGAACAGGTCTTGT 	3901
----------------------AGGTAGATAGAACAGGTCTTG 	5253
----------------------AGGTAGATAGAACAGGTCTT 	1138
----------------------AGGTAGATAGAACAGGTCT 	57
-----------------------GGTAGATAGAACAGGTCTT 	1
-----------------------GGTAGATAGAACAGGTCTTGT 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAA 	2
-----------------------------------------------------------AAGACCTACTTATCTACCAACA 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	4
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	4
------------------------------------------------------------AGACCTACTTATCTACCAACA 	3

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Mus musculus	GSM527277-2110	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGT 	3
-------------------AAAAGGTAGATAGAACAGGTCTTGT 	3
-------------------AAAAGGTAGATAGAACAGGTCT 	1
-------------------AAAAGGTAGATAGAACAGGTCTT 	4
-------------------AAAAGGTAGATAGAACAGGTCTTG 	7
--------------------AAAGGTAGATAGAACAGGTCT 	1
--------------------AAAGGTAGATAGAACAGGTCTTGT 	29
--------------------AAAGGTAGATAGAACAGGTCTTG 	65
--------------------AAAGGTAGATAGAACAGGTCTTGTT 	1
--------------------AAAGGTAGATAGAACAGGTCTT 	27
---------------------AAGGTAGATAGAACAGGTCTTGT 	4122
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	5
---------------------AAGGTAGATAGAACAGGTCTT 	2182
---------------------AAGGTAGATAGAACAGGTCTTG 	6814
---------------------AAGGTAGATAGAACAGGTCTTGTT 	97
---------------------AAGGTAGATAGAACAGGTCT 	119
---------------------AAGGTAGATAGAACAGGTC 	42
----------------------AGGTAGATAGAACAGGTCTTGTT 	156
----------------------AGGTAGATAGAACAGGTCTTGT 	542
----------------------AGGTAGATAGAACAGGTCTT 	99
----------------------AGGTAGATAGAACAGGTCTTGTTTGC 	1
----------------------AGGTAGATAGAACAGGTCT 	1
----------------------AGGTAGATAGAACAGGTCTTGTTTG 	3
----------------------AGGTAGATAGAACAGGTCTTG 	747
----------------------AGGTAGATAGAACAGGTCTTGTTT 	12
-----------------------GGTAGATAGAACAGGTCTT 	1
-----------------------GGTAGATAGAACAGGTCTTGTT 	2
-----------------------GGTAGATAGAACAGGTCTTG 	24
-----------------------GGTAGATAGAACAGGTCTTGT 	16
------------------------GTAGATAGAACAGGTCTTGTT 	2
------------------------GTAGATAGAACAGGTCTTGT 	9
------------------------GTAGATAGAACAGGTCTTG 	5
-------------------------TAGATAGAACAGGTCTTGT 	1
---------------------------------------------------------TCAAGACCTACTTATCTACCAAC 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAACA 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAAC 	3
----------------------------------------------------------CAAGACCTACTTATCTACCAA 	2
-----------------------------------------------------------AAGACCTACTTATCTACCAACAG 	4
-----------------------------------------------------------AAGACCTACTTATCTACCAACAGC 	4
-----------------------------------------------------------AAGACCTACTTATCTACCAAC 	3
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	393
------------------------------------------------------------AGACCTACTTATCTACCAA 	6
------------------------------------------------------------AGACCTACTTATCTACCAACAGCC 	34
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	542
------------------------------------------------------------AGACCTACTTATCTACCAACA 	157
------------------------------------------------------------AGACCTACTTATCTACCAAC 	59
-------------------------------------------------------------GACCTACTTATCTACCAACAGCC 	3
-------------------------------------------------------------GACCTACTTATCTACCAACAGC 	21
-------------------------------------------------------------GACCTACTTATCTACCAACAG 	7
-------------------------------------------------------------GACCTACTTATCTACCAACA 	9
--------------------------------------------------------------ACCTACTTATCTACCAACAGCC 	1
--------------------------------------------------------------ACCTACTTATCTACCAACAGC 	2
--------------------------------------------------------------ACCTACTTATCTACCAACAG 	6
---------------------------------------------------------------CCTACTTATCTACCAACAG 	39
---------------------------------------------------------------CCTACTTATCTACCAACAGC 	2
----------------------------------------------------------------CTACTTATCTACCAACAGCC 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Mus musculus	GSM539848	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTT 	10
--------------------AAAGGTAGATAGAACAGGTCTTG 	102
--------------------AAAGGTAGATAGAACAGGTCTT 	31
--------------------AAAGGTAGATAGAACAGGTC 	2
--------------------AAAGGTAGATAGAACAGGTCTTGT 	20
--------------------AAAGGTAGATAGAACAGGTCT 	6
---------------------AAGGTAGATAGAACAGGTCTTGTT 	244
---------------------AAGGTAGATAGAACAGGTCTTGT 	2082
---------------------AAGGTAGATAGAACAGGTCTTG 	9280
---------------------AAGGTAGATAGAACAGGTCTT 	1170
---------------------AAGGTAGATAGAACAGGTCT 	103
---------------------AAGGTAGATAGAACAGGTC 	98
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	2
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	4
----------------------AGGTAGATAGAACAGGTCTTGTTTG 	3
----------------------AGGTAGATAGAACAGGTCTTGTTT 	49
----------------------AGGTAGATAGAACAGGTCTTGTT 	232
----------------------AGGTAGATAGAACAGGTCTTGT 	645
----------------------AGGTAGATAGAACAGGTCTTG 	2277
----------------------AGGTAGATAGAACAGGTCTT 	399
----------------------AGGTAGATAGAACAGGTCT 	19
----------------------------------------------------------CAAGACCTACTTATCTACCAA 	3
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	7
------------------------------------------------------------AGACCTACTTATCTACCAACAGCC 	1
------------------------------------------------------------AGACCTACTTATCTACCAACA 	17
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	20
------------------------------------------------------------AGACCTACTTATCTACCAAC 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Mus musculus	GSM539872	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTG 	2
-------------------AAAAGGTAGATAGAACAGGTCTT 	2
-------------------AAAAGGTAGATAGAACAGGTCT 	3
-------------------AAAAGGTAGATAGAACAGGTCTTGT 	2
--------------------AAAGGTAGATAGAACAGGTCTTG 	100
--------------------AAAGGTAGATAGAACAGGTCTT 	34
--------------------AAAGGTAGATAGAACAGGTC 	2
--------------------AAAGGTAGATAGAACAGGTCTTGT 	28
--------------------AAAGGTAGATAGAACAGGTCT 	5
--------------------AAAGGTAGATAGAACAGGTCTTGTT 	1
---------------------AAGGTAGATAGAACAGGTCTTGTT 	209
---------------------AAGGTAGATAGAACAGGTCTTGT 	3084
---------------------AAGGTAGATAGAACAGGTCTTG 	8122
---------------------AAGGTAGATAGAACAGGTCTT 	1290
---------------------AAGGTAGATAGAACAGGTCT 	164
---------------------AAGGTAGATAGAACAGGTC 	105
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	3
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	11
----------------------AGGTAGATAGAACAGGTCTTGTTT 	31
----------------------AGGTAGATAGAACAGGTCTTGTT 	196
----------------------AGGTAGATAGAACAGGTCTTGT 	734
----------------------AGGTAGATAGAACAGGTCTTG 	1709
----------------------AGGTAGATAGAACAGGTCTT 	286
----------------------AGGTAGATAGAACAGGTCT 	26
-----------------------GGTAGATAGAACAGGTCTTGTT 	1
-----------------------GGTAGATAGAACAGGTCTTG 	4
-----------------------GGTAGATAGAACAGGTCTTGT 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	2
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	1
------------------------------------------------------------AGACCTACTTATCTACCAACA 	3
------------------------------------------------------------AGACCTACTTATCTACCAAC 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Mus musculus	GSM539861	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTG 	7
-------------------AAAAGGTAGATAGAACAGGTCTT 	8
-------------------AAAAGGTAGATAGAACAGGTCT 	3
-------------------AAAAGGTAGATAGAACAGGTCTTGT 	1
-------------------AAAAGGTAGATAGAACAGGT 	1
-------------------AAAAGGTAGATAGAACAGG 	1
--------------------AAAGGTAGATAGAACAGGTCTTG 	161
--------------------AAAGGTAGATAGAACAGGTCTT 	120
--------------------AAAGGTAGATAGAACAGGTC 	6
--------------------AAAGGTAGATAGAACAGGTCTTGT 	22
--------------------AAAGGTAGATAGAACAGGTCT 	32
--------------------AAAGGTAGATAGAACAGGT 	6
---------------------AAGGTAGATAGAACAGGTCTTGTT 	78
---------------------AAGGTAGATAGAACAGGTCTTGT 	4432
---------------------AAGGTAGATAGAACAGGTCTTG 	18641
---------------------AAGGTAGATAGAACAGGTCTT 	7205
---------------------AAGGTAGATAGAACAGGTCT 	1170
---------------------AAGGTAGATAGAACAGGTC 	367
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	5
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	1
----------------------AGGTAGATAGAACAGGTCTTGTTT 	94
----------------------AGGTAGATAGAACAGGTCTTGTT 	1127
----------------------AGGTAGATAGAACAGGTCTTGT 	2227
----------------------AGGTAGATAGAACAGGTCTTG 	6606
----------------------AGGTAGATAGAACAGGTCTT 	2961
----------------------AGGTAGATAGAACAGGTCT 	257
-----------------------GGTAGATAGAACAGGTCTTGTT 	1
-----------------------GGTAGATAGAACAGGTCTTG 	11
-----------------------GGTAGATAGAACAGGTCTT 	2
-----------------------GGTAGATAGAACAGGTCTTGT 	4
---------------------------------------------------------TCAAGACCTACTTATCTACCAA 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAA 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAAC 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	36
------------------------------------------------------------AGACCTACTTATCTACCAACA 	39
------------------------------------------------------------AGACCTACTTATCTACCAAC 	3
------------------------------------------------------------AGACCTACTTATCTACCAA 	6
-------------------------------------------------------------GACCTACTTATCTACCAAC 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Mus musculus	GSM539853	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTG 	5
-------------------AAAAGGTAGATAGAACAGGTCTT 	7
-------------------AAAAGGTAGATAGAACAGGTCTTGT 	2
--------------------AAAGGTAGATAGAACAGGTCTTGT 	25
--------------------AAAGGTAGATAGAACAGGTCTTG 	157
--------------------AAAGGTAGATAGAACAGGTCTT 	26
--------------------AAAGGTAGATAGAACAGGTCTTGTT 	1
--------------------AAAGGTAGATAGAACAGGTCT 	4
--------------------AAAGGTAGATAGAACAGGT 	1
---------------------AAGGTAGATAGAACAGGTCTTGTT 	263
---------------------AAGGTAGATAGAACAGGTCTTGT 	2229
---------------------AAGGTAGATAGAACAGGTCTTG 	12638
---------------------AAGGTAGATAGAACAGGTCTT 	1270
---------------------AAGGTAGATAGAACAGGTCT 	96
---------------------AAGGTAGATAGAACAGGTC 	190
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	10
----------------------AGGTAGATAGAACAGGTCTTGTTTG 	1
----------------------AGGTAGATAGAACAGGTCTTGTTT 	92
----------------------AGGTAGATAGAACAGGTCTTGTT 	483
----------------------AGGTAGATAGAACAGGTCTTGT 	940
----------------------AGGTAGATAGAACAGGTCTTG 	3937
----------------------AGGTAGATAGAACAGGTCTT 	732
----------------------AGGTAGATAGAACAGGTCT 	52
-----------------------GGTAGATAGAACAGGTCTTGT 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAACA 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAAC 	1
-----------------------------------------------------------AAGACCTACTTATCTACCAACA 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGCC 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	16
------------------------------------------------------------AGACCTACTTATCTACCAACA 	12

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Mus musculus	GSM539871	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTGT 	1
-------------------AAAAGGTAGATAGAACAGGTCTTG 	4
-------------------AAAAGGTAGATAGAACAGGTCTT 	1
--------------------AAAGGTAGATAGAACAGGTCTTGTT 	3
--------------------AAAGGTAGATAGAACAGGTCTTGT 	39
--------------------AAAGGTAGATAGAACAGGTCTTG 	52
--------------------AAAGGTAGATAGAACAGGTCTT 	16
--------------------AAAGGTAGATAGAACAGGTCT 	1
--------------------AAAGGTAGATAGAACAGGT 	1
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	2
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	26
---------------------AAGGTAGATAGAACAGGTCTTGTT 	191
---------------------AAGGTAGATAGAACAGGTCTTGT 	1906
---------------------AAGGTAGATAGAACAGGTCTTG 	3060
---------------------AAGGTAGATAGAACAGGTCTT 	511
---------------------AAGGTAGATAGAACAGGTCT 	11
---------------------AAGGTAGATAGAACAGGTC 	23
----------------------AGGTAGATAGAACAGGTCTTGTTTG 	1
----------------------AGGTAGATAGAACAGGTCTTGTTT 	69
----------------------AGGTAGATAGAACAGGTCTTGTT 	156
----------------------AGGTAGATAGAACAGGTCTTGT 	305
----------------------AGGTAGATAGAACAGGTCTTG 	310
----------------------AGGTAGATAGAACAGGTCTT 	99
----------------------AGGTAGATAGAACAGGTCT 	4
-----------------------GGTAGATAGAACAGGTCTTG 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	2

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Mus musculus	GSM539878	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTG 	4
-------------------AAAAGGTAGATAGAACAGGTCTT 	3
-------------------AAAAGGTAGATAGAACAGGTCT 	1
-------------------AAAAGGTAGATAGAACAGGT 	1
-------------------AAAAGGTAGATAGAACAGGTCTTGT 	1
-------------------AAAAGGTAGATAGAACAGG 	1
--------------------AAAGGTAGATAGAACAGGTCTTGT 	17
--------------------AAAGGTAGATAGAACAGGTCTTG 	63
--------------------AAAGGTAGATAGAACAGGTCTT 	29
--------------------AAAGGTAGATAGAACAGGTCT 	8
--------------------AAAGGTAGATAGAACAGGT 	2
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	9
---------------------AAGGTAGATAGAACAGGTCTTGTT 	245
---------------------AAGGTAGATAGAACAGGTCTTGT 	1736
---------------------AAGGTAGATAGAACAGGTCTTG 	6352
---------------------AAGGTAGATAGAACAGGTCTT 	916
---------------------AAGGTAGATAGAACAGGTCT 	130
---------------------AAGGTAGATAGAACAGGTC 	132
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	1
----------------------AGGTAGATAGAACAGGTCTTGTTT 	44
----------------------AGGTAGATAGAACAGGTCTTGTT 	173
----------------------AGGTAGATAGAACAGGTCTTGT 	571
----------------------AGGTAGATAGAACAGGTCTTG 	1400
----------------------AGGTAGATAGAACAGGTCTT 	267
----------------------AGGTAGATAGAACAGGTCT 	25
-----------------------GGTAGATAGAACAGGTCTT 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	2
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	2
------------------------------------------------------------AGACCTACTTATCTACCAACA 	5
------------------------------------------------------------AGACCTACTTATCTACCAA 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Mus musculus	GSM539873	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTGT 	1
-------------------AAAAGGTAGATAGAACAGGTCTTG 	2
-------------------AAAAGGTAGATAGAACAGGTCTT 	3
-------------------AAAAGGTAGATAGAACAGGTC 	3
--------------------AAAGGTAGATAGAACAGGTCTTGT 	25
--------------------AAAGGTAGATAGAACAGGTCTTG 	206
--------------------AAAGGTAGATAGAACAGGTCTT 	86
--------------------AAAGGTAGATAGAACAGGTCT 	30
--------------------AAAGGTAGATAGAACAGGTC 	5
--------------------AAAGGTAGATAGAACAGGT 	4
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	2
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	11
---------------------AAGGTAGATAGAACAGGTCTTGTT 	341
---------------------AAGGTAGATAGAACAGGTCTTGT 	3422
---------------------AAGGTAGATAGAACAGGTCTTG 	15644
---------------------AAGGTAGATAGAACAGGTCTT 	3462
---------------------AAGGTAGATAGAACAGGTCT 	903
---------------------AAGGTAGATAGAACAGGTC 	223
----------------------AGGTAGATAGAACAGGTCTTGTTTG 	3
----------------------AGGTAGATAGAACAGGTCTTGTTT 	242
----------------------AGGTAGATAGAACAGGTCTTGTT 	1046
----------------------AGGTAGATAGAACAGGTCTTGT 	1687
----------------------AGGTAGATAGAACAGGTCTTG 	3972
----------------------AGGTAGATAGAACAGGTCTT 	916
----------------------AGGTAGATAGAACAGGTCT 	88
-----------------------GGTAGATAGAACAGGTCTTG 	3
----------------------------------------------------------CAAGACCTACTTATCTACCAA 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAAC 	2
----------------------------------------------------------CAAGACCTACTTATCTACCAACA 	1
-----------------------------------------------------------AAGACCTACTTATCTACCAACA 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	3
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	13
------------------------------------------------------------AGACCTACTTATCTACCAACA 	29
------------------------------------------------------------AGACCTACTTATCTACCAAC 	2
------------------------------------------------------------AGACCTACTTATCTACCAA 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Mus musculus	GSM539867	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTG 	2
--------------------AAAGGTAGATAGAACAGGTCTTGT 	2
--------------------AAAGGTAGATAGAACAGGTCTTG 	37
--------------------AAAGGTAGATAGAACAGGTCTT 	2
--------------------AAAGGTAGATAGAACAGGTCT 	1
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	1
---------------------AAGGTAGATAGAACAGGTCTTGTT 	57
---------------------AAGGTAGATAGAACAGGTCTTGT 	773
---------------------AAGGTAGATAGAACAGGTCTTG 	5516
---------------------AAGGTAGATAGAACAGGTCTT 	337
---------------------AAGGTAGATAGAACAGGTCT 	29
---------------------AAGGTAGATAGAACAGGTC 	34
----------------------AGGTAGATAGAACAGGTCTTGTTTG 	1
----------------------AGGTAGATAGAACAGGTCTTGTTT 	5
----------------------AGGTAGATAGAACAGGTCTTGTT 	79
----------------------AGGTAGATAGAACAGGTCTTGT 	246
----------------------AGGTAGATAGAACAGGTCTTG 	2319
----------------------AGGTAGATAGAACAGGTCTT 	74
----------------------AGGTAGATAGAACAGGTCT 	8
----------------------------------------------------------CAAGACCTACTTATCTACCAA 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAACAG 	1
-----------------------------------------------------------AAGACCTACTTATCTACCAACAG 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGCCA 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGCC 	3
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	8
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	32
------------------------------------------------------------AGACCTACTTATCTACCAACA 	17
-------------------------------------------------------------GACCTACTTATCTACCAACA 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Mus musculus	GSM539876	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTT 	1
-------------------AAAAGGTAGATAGAACAGGTCTTGT 	1
-------------------AAAAGGTAGATAGAACAGGTC 	1
--------------------AAAGGTAGATAGAACAGGTCTTGT 	21
--------------------AAAGGTAGATAGAACAGGTCTTG 	62
--------------------AAAGGTAGATAGAACAGGTCTT 	45
--------------------AAAGGTAGATAGAACAGGTCT 	9
--------------------AAAGGTAGATAGAACAGGTC 	2
--------------------AAAGGTAGATAGAACAGGT 	4
--------------------AAAGGTAGATAGAACAGGTCTTGTTT 	1
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	28
---------------------AAGGTAGATAGAACAGGTCTTGTT 	166
---------------------AAGGTAGATAGAACAGGTCTTGT 	3063
---------------------AAGGTAGATAGAACAGGTCTTG 	6877
---------------------AAGGTAGATAGAACAGGTCTT 	2203
---------------------AAGGTAGATAGAACAGGTCT 	408
---------------------AAGGTAGATAGAACAGGTC 	216
----------------------AGGTAGATAGAACAGGTCTTGTTT 	65
----------------------AGGTAGATAGAACAGGTCTTGTT 	448
----------------------AGGTAGATAGAACAGGTCTTGT 	852
----------------------AGGTAGATAGAACAGGTCTTG 	1255
----------------------AGGTAGATAGAACAGGTCTT 	340
----------------------AGGTAGATAGAACAGGTCT 	42
-----------------------GGTAGATAGAACAGGTCTTGT 	2
-----------------------GGTAGATAGAACAGGTCTTG 	1
-----------------------GGTAGATAGAACAGGTCTT 	2
----------------------------------------------------------CAAGACCTACTTATCTACCAAC 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGCC 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	2
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	4
------------------------------------------------------------AGACCTACTTATCTACCAAC 	1
------------------------------------------------------------AGACCTACTTATCTACCAACA 	9
------------------------------------------------------------AGACCTACTTATCTACCAA 	1

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
21	Mus musculus	GSM539854	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTG 	3
-------------------AAAAGGTAGATAGAACAGGTCTT 	6
--------------------AAAGGTAGATAGAACAGGTCTTGT 	17
--------------------AAAGGTAGATAGAACAGGTCTTG 	105
--------------------AAAGGTAGATAGAACAGGTCTT 	24
--------------------AAAGGTAGATAGAACAGGTCT 	3
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	13
---------------------AAGGTAGATAGAACAGGTCTTGTT 	264
---------------------AAGGTAGATAGAACAGGTCTTGT 	2257
---------------------AAGGTAGATAGAACAGGTCTTG 	10677
---------------------AAGGTAGATAGAACAGGTCTT 	1311
---------------------AAGGTAGATAGAACAGGTCT 	136
---------------------AAGGTAGATAGAACAGGTC 	146
----------------------AGGTAGATAGAACAGGTCTTGTTTG 	1
----------------------AGGTAGATAGAACAGGTCTTGTTT 	97
----------------------AGGTAGATAGAACAGGTCTTGTT 	299
----------------------AGGTAGATAGAACAGGTCTTGT 	854
----------------------AGGTAGATAGAACAGGTCTTG 	2674
----------------------AGGTAGATAGAACAGGTCTT 	557
----------------------AGGTAGATAGAACAGGTCT 	40
----------------------AGGTAGATAGAACAGGTCTTGTTTGC 	1
-----------------------GGTAGATAGAACAGGTCTTGT 	1
-----------------------------------------------------------AAGACCTACTTATCTACCAACA 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGCC 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	2
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	41
------------------------------------------------------------AGACCTACTTATCTACCAACA 	15
------------------------------------------------------------AGACCTACTTATCTACCAAC 	2
------------------------------------------------------------AGACCTACTTATCTACCAA 	3

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
22	Mus musculus	GSM527279-2112	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTTG 	2
-------------------AAAAGGTAGATAGAACAGGTCTTGT 	1
-------------------AAAAGGTAGATAGAACAGGTCTT 	2
--------------------AAAGGTAGATAGAACAGGTCTTG 	22
--------------------AAAGGTAGATAGAACAGGTCTT 	6
--------------------AAAGGTAGATAGAACAGGTCTTGT 	11
---------------------AAGGTAGATAGAACAGGTCTT 	508
---------------------AAGGTAGATAGAACAGGTCTTG 	2125
---------------------AAGGTAGATAGAACAGGTCTTGTT 	24
---------------------AAGGTAGATAGAACAGGTCT 	38
---------------------AAGGTAGATAGAACAGGTC 	14
---------------------AAGGTAGATAGAACAGGTCTTGT 	1315
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	2
----------------------AGGTAGATAGAACAGGTCTTGTTTGC 	1
----------------------AGGTAGATAGAACAGGTCT 	3
----------------------AGGTAGATAGAACAGGTCTTGTT 	83
----------------------AGGTAGATAGAACAGGTCTTGT 	226
----------------------AGGTAGATAGAACAGGTCTTG 	334
----------------------AGGTAGATAGAACAGGTCTT 	40
----------------------AGGTAGATAGAACAGGTCTTGTTT 	6
-----------------------GGTAGATAGAACAGGTCTTG 	6
-----------------------GGTAGATAGAACAGGTCTTGT 	6
------------------------GTAGATAGAACAGGTCTTGT 	2
------------------------GTAGATAGAACAGGTCTTG 	3
--------------------------AGATAGAACAGGTCTTGTT 	1
---------------------------------------------------------TCAAGACCTACTTATCTACCAAC 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAACA 	2
----------------------------------------------------------CAAGACCTACTTATCTACCAAC 	1
-----------------------------------------------------------AAGACCTACTTATCTACCAACAGC 	5
-----------------------------------------------------------AAGACCTACTTATCTACCAACAG 	3
-----------------------------------------------------------AAGACCTACTTATCTACCAAC 	2
-----------------------------------------------------------AAGACCTACTTATCTACCAACA 	2
------------------------------------------------------------AGACCTACTTATCTACCAA 	4
------------------------------------------------------------AGACCTACTTATCTACCAACAGCC 	28
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	442
------------------------------------------------------------AGACCTACTTATCTACCAACA 	168
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	311
------------------------------------------------------------AGACCTACTTATCTACCAAC 	42
-------------------------------------------------------------GACCTACTTATCTACCAACAGC 	8
-------------------------------------------------------------GACCTACTTATCTACCAACAG 	7
-------------------------------------------------------------GACCTACTTATCTACCAACA 	1
-------------------------------------------------------------GACCTACTTATCTACCAAC 	1
--------------------------------------------------------------ACCTACTTATCTACCAACAGC 	1
--------------------------------------------------------------ACCTACTTATCTACCAACAG 	4
---------------------------------------------------------------CCTACTTATCTACCAACAG 	17
---------------------------------------------------------------CCTACTTATCTACCAACAGC 	3

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
23	Mus musculus	GSM539874	AAGGTAGATAGAACAGGTCTTG	AGACCTACTTATCTACCAACA	up	4	1

Secondary structure

GCCTTTAGCCTCCTACATGAAAAGGTAGATAGAACAGGTCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAACAGCCATTGCCTACGTCCCA
-------------------AAAAGGTAGATAGAACAGGTCTT 	2
-------------------AAAAGGTAGATAGAACAGGTCT 	2
--------------------AAAGGTAGATAGAACAGGTCTTGT 	14
--------------------AAAGGTAGATAGAACAGGTCTTG 	57
--------------------AAAGGTAGATAGAACAGGTCTT 	39
--------------------AAAGGTAGATAGAACAGGTCT 	6
--------------------AAAGGTAGATAGAACAGGTC 	1
--------------------AAAGGTAGATAGAACAGGT 	2
---------------------AAGGTAGATAGAACAGGTCTTGTTT 	12
---------------------AAGGTAGATAGAACAGGTCTTGTT 	136
---------------------AAGGTAGATAGAACAGGTCTTGT 	2372
---------------------AAGGTAGATAGAACAGGTCTTG 	6121
---------------------AAGGTAGATAGAACAGGTCTT 	1544
---------------------AAGGTAGATAGAACAGGTCT 	188
---------------------AAGGTAGATAGAACAGGTC 	175
---------------------AAGGTAGATAGAACAGGTCTTGTTTG 	1
----------------------AGGTAGATAGAACAGGTCTTGTTTG 	2
----------------------AGGTAGATAGAACAGGTCTTGTTT 	32
----------------------AGGTAGATAGAACAGGTCTTGTT 	164
----------------------AGGTAGATAGAACAGGTCTTGT 	591
----------------------AGGTAGATAGAACAGGTCTTG 	1128
----------------------AGGTAGATAGAACAGGTCTT 	237
----------------------AGGTAGATAGAACAGGTCT 	26
-----------------------GGTAGATAGAACAGGTCTTG 	1
-----------------------GGTAGATAGAACAGGTCTTGT 	1
----------------------------------------------------------CAAGACCTACTTATCTACCAAC 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGCC 	1
------------------------------------------------------------AGACCTACTTATCTACCAACAGC 	2
------------------------------------------------------------AGACCTACTTATCTACCAACAG 	6
------------------------------------------------------------AGACCTACTTATCTACCAACA 	3

Overlaps with: MNEST004928
Overlaps with miRBase pre-miRNAs: rno-mir-1839 mmu-mir-1839 eca-mir-1839
HuntMi prediction: not a miRNA