miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: AAGTGTTTGGGGAACTCTAGG

selected species: Brachypodium distachyon



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Brachypodium distachyon GSM506620-12051 AAGTGTTTGGGGAACTCTAGG TGGGGTTCCCTCCAAACACTTCA down 0 2


Secondary structure

GGACGAACGGTTGGTTGTTTCCTGGGGTTCCCTCCAAACACTTCAGCAGGTCGGCTTTCCTATACTAGCTCACAGGCTGAAGGGTGAAGTGTTTGGGGAACTCTAGGTGACAACCGCCATTTTATC
----------------------TGGGGTTCCCTCCAAACACTTCAGC 	1
----------------------TGGGGTTCCCTCCAAACACTTCA 	23
------------------------------------------------------------------------------------TGAAGTGTTTGGGGAACTCTA 	2
------------------------------------------------------------------------------------TGAAGTGTTTGGGGAACTCT 	2
------------------------------------------------------------------------------------TGAAGTGTTTGGGGAACTC 	3
--------------------------------------------------------------------------------------AAGTGTTTGGGGAACTCTAGG 	66
--------------------------------------------------------------------------------------AAGTGTTTGGGGAACTCTA 	1
---------------------------------------------------------------------------------------AGTGTTTGGGGAACTCTAG 	1
----------------------------------------------------------------------------------------GTGTTTGGGGAACTCTAGGTG 	1
-----------------------------------------------------------------------------------------TGTTTGGGGAACTCTAGGTGA 	2

Overlaps with: MNEST041780
Overlaps with miRBase pre-miRNAs: bdi-MIR395d
HuntMi prediction: true miRNA