miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: AATTGCACGGTATCCATCTGTA

selected species: Mus musculus



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Mus musculus GSM527276 AATTGCACGGTATCCATCTGTA CAGGTGGAACACGATGCAATTTT down 2 3


Secondary structure

AAATGAACTGTTTTGCTGTTATCAGGTGGAACACGATGCAATTTTGGTTGGTGTAATAGGAGGAAAATTGCACGGTATCCATCTGTAAACCGCAGGACCTATGTGG
----------------------CAGGTGGAACACGATGCAATTT 	1
-----------------------------------------------------------------AATTGCACGGTATCCATCTGTA 	9
-----------------------------------------------------------------AATTGCACGGTATCCATCTGTAA 	1
-----------------------------------------------------------------AATTGCACGGTATCCATCTG 	1
-----------------------------------------------------------------AATTGCACGGTATCCATCTGT 	1
------------------------------------------------------------------ATTGCACGGTATCCATCTGT 	1
------------------------------------------------------------------ATTGCACGGTATCCATCTGTA 	1

Overlaps with: MNEST032034 MNEST032035
Overlaps with miRBase pre-miRNAs: mmu-mir-363
HuntMi prediction: true miRNA