miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: ACAGGAAAGGGAAAAAGGCGTA

selected species: Drosophila melanogaster



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM286607-9796 ACAGGAAAGGGAAAAAGGCGTA TGTCTTTTTCCGCTTACTGGCG down 3 2


Secondary structure

GATACACAAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCAATTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCTCA
----------------------TGTCTTTTTCCGCTTACTGGCGTT 	2
----------------------TGTCTTTTTCCGCTTACTGGCGT 	30
----------------------TGTCTTTTTCCGCTTACTGGCG 	129
----------------------TGTCTTTTTCCGCTTACTGGC 	1
----------------------------------------------------------CGACAGGAAAGGGAAAAAGGCGTA 	2
-----------------------------------------------------------GACAGGAAAGGGAAAAAGGCGT 	1
-----------------------------------------------------------GACAGGAAAGGGAAAAAGGCGTA 	88
------------------------------------------------------------ACAGGAAAGGGAAAAAGGCGTA 	190
------------------------------------------------------------ACAGGAAAGGGAAAAAGGCGT 	1

Overlaps with: MNEST036469 MNEST036470
Overlaps with miRBase pre-miRNAs: dme-mir-316
HuntMi prediction: true miRNA