miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: ACGTGCGTGGTAGTTTAACCT

selected species: Ciona intestinalis



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Ciona intestinalis GSM343283-14443 ACGTGCGTGGTAGTTTAACCT GTTTAACGTCCACGTACGTCG up 5 0


Secondary structure

GTACGTCGTAGGTTGACCTTTACGTGCGTGGTAGTTTAACCTTCTCGTGCATCGTAGTTTAGCCTTTACGTGCGTCGTAGTTTAACGTCCACGTACGTCGTAGTTTGACCTTTACGCC
---------------------ACGTGCGTGGTAGTTTAACCT 	5


HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Ciona intestinalis GSM343282-14442 ACGTGCGTGGTAGTTTAACCT GTTTAACGTCCACGTACGTCG up 5 0


Secondary structure

GTACGTCGTAGGTTGACCTTTACGTGCGTGGTAGTTTAACCTTCTCGTGCATCGTAGTTTAGCCTTTACGTGCGTCGTAGTTTAACGTCCACGTACGTCGTAGTTTGACCTTTACGCC
---------------------ACGTGCGTGGTAGTTTAACCT 	8


HuntMi prediction: true miRNA