miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: ACTCACTCAACCTGGGTGTGAT

selected species: Drosophila melanogaster



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM385821-16268 ACTCACTCAACCTGGGTGTGAT CACAACCTCCTTGAGTGAGCGA up 5 0


Secondary structure

GCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCC
--------------------GACTCACTCAACCTGGGTGTGA 	26
---------------------ACTCACTCAACCTGGGTGTGATGT 	1
---------------------ACTCACTCAACCTGGGTGTGAT 	418
----------------------CTCACTCAACCTGGGTGTGAT 	1
----------------------------------------------------------------TCACAACCTCCTTGAGTGAGCGA 	340
----------------------------------------------------------------TCACAACCTCCTTGAGTGAGC 	46
-----------------------------------------------------------------CACAACCTCCTTGAGTGAGC 	2
------------------------------------------------------------------ACAACCTCCTTGAGTGAGCG 	11
--------------------------------------------------------------------AACCTCCTTGAGTGAGCGA 	1

Overlaps with: MNEST036451 MNEST036452
Overlaps with miRBase pre-miRNAs: dsi-mir-307 der-mir-307 dme-mir-307a dse-mir-307 dps-mir-307b dya-mir-307 dme-mir-307b dan-mir-307
HuntMi prediction: true miRNA