miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: ACTCGGCGTGGCGTCGGTCGTG

selected species: Homo sapiens



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM494811_K562 ACTCGGCGTGGCGTCGGTCGTG CGACCGGACCTCGACCGGCTCG down 4 2


Secondary structure

CCAGCTGAGTCACTGTCACTGCCTACCAATCTCGACCGGACCTCGACCGGCTCGTCTGTGTTGCCAATCGACTCGGCGTGGCGTCGGTCGTGGTAGATAGGCGGTCATGCATACGAATTTT
-------------------------------TCGACCGGACCTCGACCGGCTCG 	28
-------------------------------TCGACCGGACCTCGACCGGCTC 	47
-------------------------------TCGACCGGACCTCGACCGGCTCGT 	2
-------------------------------TCGACCGGACCTCGACCGGCT 	3
-------------------------------TCGACCGGACCTCGACCGGC 	2
----------------------------------------------------------------------ACTCGGCGTGGCGTCGGTCGTGGT 	17
----------------------------------------------------------------------ACTCGGCGTGGCGTCGGTCGTGG 	77
----------------------------------------------------------------------ACTCGGCGTGGCGTCGGTCGTG 	149
----------------------------------------------------------------------ACTCGGCGTGGCGTCGGTCGT 	43
----------------------------------------------------------------------ACTCGGCGTGGCGTCGGTCG 	5
-----------------------------------------------------------------------CTCGGCGTGGCGTCGGTCGTGGT 	18
-----------------------------------------------------------------------CTCGGCGTGGCGTCGGTCGTGG 	17
-----------------------------------------------------------------------CTCGGCGTGGCGTCGGTCGTG 	9
-----------------------------------------------------------------------CTCGGCGTGGCGTCGGTCGTGGTA 	2
-----------------------------------------------------------------------CTCGGCGTGGCGTCGGTCGT 	2
--------------------------------------------------------------------------GGCGTGGCGTCGGTCGTGG 	1


Overlaps with: MNEST030724
Overlaps with miRBase pre-miRNAs: ppy-mir-1307 hsa-mir-1307 ptr-mir-1307
HuntMi prediction: true miRNA