miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: AGAGGCTGGCACTGGGACACAT

selected species: Mus musculus



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Mus musculus GSM539850 AGAGGCTGGCACTGGGACACAT TGGTCCCATCTGTCTGCCTCTCT down 5 1


Secondary structure

TGCAAACTATGTAGTCAGTCAGTGGTCCCATCTGTCTGCCTCTCTCTCGTTCAGTTTCCATGGAGAGGCTGGCACTGGGACACATGACTGATGGTATGCTCCCC
---------------------------------------------------------------AGAGGCTGGCACTGGGACAC 	2
---------------------------------------------------------------AGAGGCTGGCACTGGGACACAT 	11
---------------------------------------------------------------AGAGGCTGGCACTGGGACACA 	8

Overlaps with: MNEST032466
Overlaps with miRBase pre-miRNAs: mmu-mir-1962
HuntMi prediction: true miRNA