miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: AGATATTGGTGCGGTTCAATC

selected species: Glycine max



2 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Glycine max GSM543396 AGATATTGGTGCGGTTCAATC TTGAGCCGTGCCAATATCACA up 1 0


Secondary structure

TCAAACTTCTAACGAATAGCTTGAGAACTTGAGATATTGGTGCGGTTCAATCAGAAGGCAGTGTTTTATGATCCAAAAACTCTGTGTTATTTGATTGAGCCGTGCCAATATCACATGTAATTCATCTCGGGCTATGACATTTT
-------------------------------AGATATTGGTGCGGTTCAATC 	34
-------------------------------------------------------------------------------------------TGATTGAGCCGTGCCAATATC 	12


Overlaps with miRBase pre-miRNAs: gma-MIR171q
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Glycine max GSM543396 AGATATTGGTGCGGTTCAATC TTGAGCCGTGCCAATATCACA up 1 0


Secondary structure

AACGTATAATTTAAGAACTTGAGATATTGGTGCGGTTCAATCAGAAGGCAGTGTTTTATGATCCAAAAGCTCTGTGTTATTTGATTGAGCCGTGCCAATATCACATGTTATTGATCTCGGGCT
---------------------AGATATTGGTGCGGTTCAATC 	34
---------------------------------------------------------------------------------TGATTGAGCCGTGCCAATATC 	12

Overlaps with: MNEST040457
Overlaps with miRBase pre-miRNAs: gma-MIR171c
HuntMi prediction: true miRNA