miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: AGATCAGAAGGTGATTGTGGCT

selected species: Homo sapiens



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM494809_Normal_1 AGATCAGAAGGTGATTGTGGCT CCACAGCACTGCCTGGTCAGA up 3 1


Secondary structure

TCTCCCCGTCACCTGCTCCTCAGATCAGAAGGTGATTGTGGCTTTGGGTGGATATTAATCAGCCACAGCACTGCCTGGTCAGAAAGAGCAAGTGTCCTAGC
--------------------CAGATCAGAAGGTGATTGTGGCT 	5
--------------------CAGATCAGAAGGTGATTGTGGCTT 	2
--------------------CAGATCAGAAGGTGATTGTGGC 	1
--------------------CAGATCAGAAGGTGATTGTGG 	1
---------------------AGATCAGAAGGTGATTGTGGCTT 	14
---------------------AGATCAGAAGGTGATTGTGGCT 	141
---------------------AGATCAGAAGGTGATTGTGGCTTT 	4
---------------------AGATCAGAAGGTGATTGTGGC 	3
---------------------AGATCAGAAGGTGATTGTGG 	4
---------------------AGATCAGAAGGTGATTGTGGCTTTG 	1

Overlaps with: MNEST026834
Overlaps with miRBase pre-miRNAs: ptr-mir-383 eca-mir-383 ppy-mir-383 hsa-mir-383 mml-mir-383 cfa-mir-383
HuntMi prediction: true miRNA