miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: AGGTAACAGGTTTGTTTTGTGA

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant AGGTAACAGGTTTGTTTTGTGA CCCAGACGAACTCTGTTACCCCA up 4 1


Secondary structure

TGTGATTGCTTGAATACTATCAGGTAACAGGTTTGTTTTGTGAGTGATAAATTTAAAACTTCCCAGACGAACTCTGTTACCCCATAGTTTCAAGAAAAACAT
---------------------AGGTAACAGGTTTGTTTTGTGA 	12
---------------------AGGTAACAGGTTTGTTTTGTG 	1
--------------------------------------------------------------CCAGACGAACTCTGTTACCCCA 	2
--------------------------------------------------------------CCAGACGAACTCTGTTACCCC 	1
--------------------------------------------------------------CCAGACGAACTCTGTTACC 	1

Overlaps with: MNEST035124
Overlaps with miRBase pre-miRNAs: api-mir-3030
HuntMi prediction: true miRNA