miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions




selected mature miRNA sequence: ATAGGACTCATATAGTGCCAG

selected species: Homo sapiens



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM651905 ATAGGACTCATATAGTGCCAG GACACTATACGAGTCATATAA down 5 0


Secondary structure

AGAAATTTACACTAGATGGAATCGAATTTCCCTAAAGGGCCAGACACTATACGAGTCATATAAGGGAAGGCATTATAGGACTCATATAGTGCCAGGTGTTTTGTGGGACACTATTCGATGGATCTCAGGAGAAC
--------------------------------------------------------------------------ATAGGACTCATATAGTGCCAG 	12
--------------------------------------------------------------------------ATAGGACTCATATAGTGCC 	4
--------------------------------------------------------------------------ATAGGACTCATATAGTGCCA 	2
---------------------------------------------------------------------------TAGGACTCATATAGTGCCAG 	2

Overlaps with: MNEST029235 MNEST029236
Overlaps with miRBase pre-miRNAs: ptr-mir-3117 hsa-mir-3117
HuntMi prediction: true miRNA