miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



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selected mature miRNA sequence: ATATAATACAACCTGCTAAGTG

selected species: Mus musculus



23 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Mus musculus GSM527274-2107 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTG 	100
---------------------ATATAATACAACCTGCTAAG 	14
---------------------ATATAATACAACCTGCTAAGTGT 	8
---------------------ATATAATACAACCTGCTAAGT 	81
----------------------TATAATACAACCTGCTAAGT 	1
-----------------------ATAATACAACCTGCTAAGTG 	1
-----------------------ATAATACAACCTGCTAAGT 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	19
----------------------------------------------------TTAGCAGGTTGTATTATCATT 	1


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Mus musculus GSM539877-5198 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGT 	3
---------------------ATATAATACAACCTGCTAAGTG 	13
---------------------ATATAATACAACCTGCTAAGT 	3
---------------------ATATAATACAACCTGCTAAG 	1
---------------------ATATAATACAACCTGCTAA 	2


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Mus musculus GSM539838 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGTTCT 	1
---------------------ATATAATACAACCTGCTAAGTGTT 	5
---------------------ATATAATACAACCTGCTAAGTGT 	152
---------------------ATATAATACAACCTGCTAAGTG 	729
---------------------ATATAATACAACCTGCTAAGT 	400
---------------------ATATAATACAACCTGCTAAG 	28
---------------------ATATAATACAACCTGCTAA 	10
---------------------ATATAATACAACCTGCTAAGTGTTC 	2
--------------------------------------------------ACTTAGCAGGTTGTATTATCAT 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	14
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	3
---------------------------------------------------CTTAGCAGGTTGTATTATCA 	2
----------------------------------------------------TTAGCAGGTTGTATTATCATT 	3
-----------------------------------------------------TAGCAGGTTGTATTATCATT 	2


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Mus musculus GSM539850 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGT 	10
---------------------ATATAATACAACCTGCTAAGTG 	198
---------------------ATATAATACAACCTGCTAAGT 	108
---------------------ATATAATACAACCTGCTAAG 	14
---------------------ATATAATACAACCTGCTAA 	3
-----------------------ATAATACAACCTGCTAAGTG 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	5
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	2
----------------------------------------------------TTAGCAGGTTGTATTATCAT 	1


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Mus musculus GSM539835 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGTT 	2
---------------------ATATAATACAACCTGCTAAGTGT 	135
---------------------ATATAATACAACCTGCTAAGTG 	753
---------------------ATATAATACAACCTGCTAAGT 	121
---------------------ATATAATACAACCTGCTAA 	18
---------------------ATATAATACAACCTGCTAAG 	49
---------------------ATATAATACAACCTGCTAAGTGTTCT 	6
----------------------TATAATACAACCTGCTAAGTG 	1
-----------------------ATAATACAACCTGCTAAGTGT 	1
--------------------------------------------------ACTTAGCAGGTTGTATTATCAT 	1
--------------------------------------------------ACTTAGCAGGTTGTATTATC 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	7
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	73
---------------------------------------------------CTTAGCAGGTTGTATTATC 	1
----------------------------------------------------TTAGCAGGTTGTATTATCATT 	3


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Mus musculus GSM539869 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGT 	4
---------------------ATATAATACAACCTGCTAAGTG 	35
---------------------ATATAATACAACCTGCTAAGT 	10
---------------------ATATAATACAACCTGCTAAG 	1
---------------------ATATAATACAACCTGCTAA 	5
--------------------------------------------------ACTTAGCAGGTTGTATTATCATT 	1
--------------------------------------------------ACTTAGCAGGTTGTATTATCAT 	3
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	29
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	2
----------------------------------------------------TTAGCAGGTTGTATTATCATT 	1


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Mus musculus GSM539870 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGT 	8
---------------------ATATAATACAACCTGCTAAGTG 	85
---------------------ATATAATACAACCTGCTAAGT 	12
---------------------ATATAATACAACCTGCTAAG 	2
---------------------ATATAATACAACCTGCTAA 	6
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	13
----------------------------------------------------TTAGCAGGTTGTATTATCATT 	1


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Mus musculus GSM539849 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGTT 	1
---------------------ATATAATACAACCTGCTAAGTGT 	10
---------------------ATATAATACAACCTGCTAAGTG 	37
---------------------ATATAATACAACCTGCTAAGT 	21
---------------------ATATAATACAACCTGCTAA 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	6
----------------------------------------------------TTAGCAGGTTGTATTATCATT 	1


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Mus musculus GSM539848 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGTTC 	47
---------------------ATATAATACAACCTGCTAAGTGTT 	4
---------------------ATATAATACAACCTGCTAAGTGT 	387
---------------------ATATAATACAACCTGCTAAGTG 	1787
---------------------ATATAATACAACCTGCTAAGT 	602
---------------------ATATAATACAACCTGCTAAG 	36
---------------------ATATAATACAACCTGCTAA 	169
---------------------ATATAATACAACCTGCTAAGTGTTCT 	2
-----------------------ATAATACAACCTGCTAAGTG 	3
------------------------TAATACAACCTGCTAAGTGTTCT 	1
-------------------------AATACAACCTGCTAAGTGTTC 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	3


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Mus musculus GSM539864 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGT 	27
---------------------ATATAATACAACCTGCTAAGT 	109
---------------------ATATAATACAACCTGCTAAG 	18
---------------------ATATAATACAACCTGCTAAGTG 	189
---------------------ATATAATACAACCTGCTAA 	4
---------------------ATATAATACAACCTGCTAAGTGTTC 	1
--------------------------------------------------ACTTAGCAGGTTGTATTATCAT 	1
--------------------------------------------------ACTTAGCAGGTTGTATTAT 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	3
---------------------------------------------------CTTAGCAGGTTGTATTATCA 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	28
----------------------------------------------------TTAGCAGGTTGTATTATCATT 	2


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Mus musculus GSM539872 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGTT 	1
---------------------ATATAATACAACCTGCTAAGTGT 	9
---------------------ATATAATACAACCTGCTAAGTG 	68
---------------------ATATAATACAACCTGCTAAGT 	27
---------------------ATATAATACAACCTGCTAAG 	2
---------------------ATATAATACAACCTGCTAA 	5
---------------------ATATAATACAACCTGCTAAGTGTTC 	1
--------------------------------------------------ACTTAGCAGGTTGTATTATCAT 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	8
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	5
---------------------------------------------------CTTAGCAGGTTGTATTATCA 	1


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Mus musculus GSM539861 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGTT 	2
---------------------ATATAATACAACCTGCTAAGTGT 	34
---------------------ATATAATACAACCTGCTAAGTG 	470
---------------------ATATAATACAACCTGCTAAGT 	171
---------------------ATATAATACAACCTGCTAAG 	25
---------------------ATATAATACAACCTGCTAA 	74
------------------------TAATACAACCTGCTAAGTGTTCT 	1
--------------------------ATACAACCTGCTAAGTGTTCT 	1
--------------------------------------------------ACTTAGCAGGTTGTATTATCAT 	5
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	7
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	7
---------------------------------------------------CTTAGCAGGTTGTATTATCA 	3
----------------------------------------------------TTAGCAGGTTGTATTATCATT 	1


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Mus musculus GSM539847 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGT 	5
---------------------ATATAATACAACCTGCTAAGTG 	223
---------------------ATATAATACAACCTGCTAAGT 	87
---------------------ATATAATACAACCTGCTAAG 	20
---------------------ATATAATACAACCTGCTAA 	46
-----------------------ATAATACAACCTGCTAAGT 	1
--------------------------------------------------ACTTAGCAGGTTGTATTATCAT 	3
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	16
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	5
---------------------------------------------------CTTAGCAGGTTGTATTATC 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCA 	2
----------------------------------------------------TTAGCAGGTTGTATTATCATT 	2


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Mus musculus GSM539853 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGTTC 	2
---------------------ATATAATACAACCTGCTAAGTGTT 	1
---------------------ATATAATACAACCTGCTAAGTGT 	44
---------------------ATATAATACAACCTGCTAAGTG 	293
---------------------ATATAATACAACCTGCTAAGT 	49
---------------------ATATAATACAACCTGCTAAG 	2
---------------------ATATAATACAACCTGCTAA 	38
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	3


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Mus musculus GSM539871 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTG 	8
---------------------ATATAATACAACCTGCTAAGT 	1
---------------------ATATAATACAACCTGCTAA 	3
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	2


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
16 Mus musculus GSM539878 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGTTC 	3
---------------------ATATAATACAACCTGCTAAGTGTT 	1
---------------------ATATAATACAACCTGCTAAGTGT 	19
---------------------ATATAATACAACCTGCTAAGTG 	138
---------------------ATATAATACAACCTGCTAAGT 	35
---------------------ATATAATACAACCTGCTAAG 	2
---------------------ATATAATACAACCTGCTAA 	14
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCA 	1


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
17 Mus musculus GSM539873 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGT 	19
---------------------ATATAATACAACCTGCTAAGTG 	404
---------------------ATATAATACAACCTGCTAAGT 	35
---------------------ATATAATACAACCTGCTAAG 	3
---------------------ATATAATACAACCTGCTAA 	33
---------------------ATATAATACAACCTGCTAAGTGTTC 	1
-----------------------ATAATACAACCTGCTAAGTG 	2
--------------------------ATACAACCTGCTAAGTGTTCT 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	2
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	4


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
18 Mus musculus GSM539875 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGT 	7
---------------------ATATAATACAACCTGCTAAGTG 	26
---------------------ATATAATACAACCTGCTAAGT 	16
---------------------ATATAATACAACCTGCTAAG 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	3
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	3


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
19 Mus musculus GSM539857 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGT 	12
---------------------ATATAATACAACCTGCTAAGTG 	76
---------------------ATATAATACAACCTGCTAAGT 	54
---------------------ATATAATACAACCTGCTAAG 	6
---------------------ATATAATACAACCTGCTAA 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	12
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	2
---------------------------------------------------CTTAGCAGGTTGTATTATCA 	1
----------------------------------------------------TTAGCAGGTTGTATTATCATT 	1


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
20 Mus musculus GSM539867 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
--------------------GATATAATACAACCTGCTAAGT 	1
---------------------ATATAATACAACCTGCTAAGTGTTCT 	1
---------------------ATATAATACAACCTGCTAAGTGT 	36
---------------------ATATAATACAACCTGCTAAGTG 	729
---------------------ATATAATACAACCTGCTAAGT 	60
---------------------ATATAATACAACCTGCTAAG 	9
---------------------ATATAATACAACCTGCTAA 	8
-----------------------ATAATACAACCTGCTAAGTG 	2
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	26
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	1
---------------------------------------------------CTTAGCAGGTTGTATTATC 	1
----------------------------------------------------TTAGCAGGTTGTATTATCATT 	2
----------------------------------------------------TTAGCAGGTTGTATTATCAT 	1


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
21 Mus musculus GSM539876 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGT 	12
---------------------ATATAATACAACCTGCTAAGTG 	57
---------------------ATATAATACAACCTGCTAAGT 	31
---------------------ATATAATACAACCTGCTAAG 	4
---------------------ATATAATACAACCTGCTAA 	3
--------------------------------------------------ACTTAGCAGGTTGTATTATCAT 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	10
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	2
---------------------------------------------------CTTAGCAGGTTGTATTATCA 	1
----------------------------------------------------TTAGCAGGTTGTATTATCATT 	2


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
22 Mus musculus GSM539854 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGTTC 	5
---------------------ATATAATACAACCTGCTAAGTGT 	62
---------------------ATATAATACAACCTGCTAAGTG 	327
---------------------ATATAATACAACCTGCTAAGT 	58
---------------------ATATAATACAACCTGCTAAG 	4
---------------------ATATAATACAACCTGCTAA 	33
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	3


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
23 Mus musculus GSM539874 ATATAATACAACCTGCTAAGTG CTTAGCAGGTTGTATTATCATT up 2 0


Secondary structure

GAAGAAATCCTACTCGGGTGGATATAATACAACCTGCTAAGTGTTCTAGCACTTAGCAGGTTGTATTATCATTGTCCGAGGTTATGGCTCT
---------------------ATATAATACAACCTGCTAAGTGT 	11
---------------------ATATAATACAACCTGCTAAGTG 	113
---------------------ATATAATACAACCTGCTAAGT 	25
---------------------ATATAATACAACCTGCTAAG 	8
---------------------ATATAATACAACCTGCTAA 	2
-----------------------ATAATACAACCTGCTAAGTG 	1
------------------------TAATACAACCTGCTAAGTGTTCT 	1
--------------------------------------------------ACTTAGCAGGTTGTATTATCA 	1
---------------------------------------------------CTTAGCAGGTTGTATTATCATT 	5
---------------------------------------------------CTTAGCAGGTTGTATTATCAT 	2
----------------------------------------------------TTAGCAGGTTGTATTATCATT 	1


Overlaps with: MNEST032043
Overlaps with miRBase pre-miRNAs: mmu-mir-374b mmu-mir-374c
HuntMi prediction: true miRNA