miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: ATCACACAAAGGCAACTTTTGT

selected species: Homo sapiens



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Homo sapiens GSM494810_Normal_2 ATCACACAAAGGCAACTTTTGT AGAGGTTGCCCTTGGTGAATTC down 1 2


Secondary structure

TGCTGATGTTTGACCCTTGAGCAGAGGTTGCCCTTGGTGAATTCGCTTTATTTATGTTGAATCACACAAAGGCAACTTTTGTTTGAGTATCAAATCCTGCT
----------------------AGAGGTTGCCCTTGGTGAATTCG 	5
----------------------AGAGGTTGCCCTTGGTGAATTC 	2
-----------------------------------------------------------AATCACACAAAGGCAACTTTTGT 	1
-----------------------------------------------------------AATCACACAAAGGCAACTTTTG 	1
------------------------------------------------------------ATCACACAAAGGCAACTTTTGT 	11
------------------------------------------------------------ATCACACAAAGGCAACTTTTG 	2
------------------------------------------------------------ATCACACAAAGGCAACTTTTGTT 	1

Overlaps with: MNEST030357
Overlaps with miRBase pre-miRNAs: hsa-mir-377 ptr-mir-377 eca-mir-377 cfa-mir-377 mml-mir-377 bta-mir-377 ppy-mir-377
HuntMi prediction: true miRNA