miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: ATCATGATGGGCTCCTCGGTGT

selected species: Mus musculus

23 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Mus musculus	GSM527274-2107	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
-----CCCAATGCCCGGGGAGAAG 	1
------------------------TACGGTGAGCCTGTCATTATTCA 	6
------------------------TACGGTGAGCCTGTCATTAT 	1
------------------------TACGGTGAGCCTGTCATTATTC 	105
------------------------TACGGTGAGCCTGTCATTATT 	29
-------------------------ACGGTGAGCCTGTCATTATTC 	1
-------------------------ACGGTGAGCCTGTCATTATT 	1
--------------------------CGGTGAGCCTGTCATTATTC 	3
----------------------------GTGAGCCTGTCATTATTCA 	1
--------------------------------------------------------------------------GGATCATGATGGGCTCCTCGGT 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGT 	3
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTG 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	1101
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	115
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTCT 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	55
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	96
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	123
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	51
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTG 	3
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTT 	1
------------------------------------------------------------------------------CATGATGGGCTCCTCGGTG 	1
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGT 	14

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Mus musculus	GSM527280	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
------------------------TACGGTGAGCCTGTCATTATTCA 	9
------------------------TACGGTGAGCCTGTCATTAT 	2
------------------------TACGGTGAGCCTGTCATTATTC 	46
------------------------TACGGTGAGCCTGTCATTATT 	16
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGT 	3
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGT 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	24
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	47
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	533
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	57
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	57
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	23
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTT 	2
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGT 	2
------------------------------------------------------------------------------CATGATGGGCTCCTCGGTG 	2
------------------------------------------------------------------------------CATGATGGGCTCCTCGGTGT 	1
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGT 	5
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGTT 	1

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Mus musculus	GSM539868	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	2
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	10
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	1
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	1

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Mus musculus	GSM539877-5198	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
------------------------TACGGTGAGCCTGTCATTATT 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	15
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	2
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	4
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	4

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Mus musculus	GSM539835	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTCT 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	9
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	4

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Mus musculus	GSM539855	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
------------------------TACGGTGAGCCTGTCATTATTC 	1
------------------------TACGGTGAGCCTGTCATTAT 	2
------------------------TACGGTGAGCCTGTCATTATT 	2
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGT 	3
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTG 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTCT 	4
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	28
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	634
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	77
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	30
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	27
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	15
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	36
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTT 	3
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTG 	3
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGT 	4
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTTC 	3
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGT 	5
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGTT 	2

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Mus musculus	GSM527276	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
------------------------TACGGTGAGCCTGTCATTATTCA 	7
------------------------TACGGTGAGCCTGTCATTAT 	2
------------------------TACGGTGAGCCTGTCATTATTC 	133
------------------------TACGGTGAGCCTGTCATTATT 	29
-------------------------ACGGTGAGCCTGTCATTATTC 	2
--------------------------CGGTGAGCCTGTCATTATTC 	1
--------------------------CGGTGAGCCTGTCATTATTCA 	1
---------------------------GGTGAGCCTGTCATTATTC 	4
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGT 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTG 	2
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGT 	6
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGG 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	77
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	168
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	87
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	1137
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	134
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	53
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTG 	2
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTT 	3
------------------------------------------------------------------------------CATGATGGGCTCCTCGGTG 	2
------------------------------------------------------------------------------CATGATGGGCTCCTCGGTGT 	1
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGT 	14

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Mus musculus	GSM539869	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
------------------------TACGGTGAGCCTGTCATTAT 	13
------------------------TACGGTGAGCCTGTCATTA 	1
------------------------TACGGTGAGCCTGTCATTATTCA 	5
------------------------TACGGTGAGCCTGTCATTATTC 	94
------------------------TACGGTGAGCCTGTCATTATT 	83
-------------------------ACGGTGAGCCTGTCATTATTCA 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGT 	50
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGTTC 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGTT 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTG 	5
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGT 	5
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGG 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCG 	4
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTCT 	254
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	1794
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTCTC 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	437
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	1582
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	14560
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	649
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	182
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTTCT 	2
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTTC 	6
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTT 	24
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	225
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTG 	9
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGT 	10
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGTTC 	1
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGT 	5

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Mus musculus	GSM539870	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
------------------------TACGGTGAGCCTGTCATTATTC 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTCT 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	3
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	21
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	2
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	5

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Mus musculus	GSM527277-2110	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
------------------------TACGGTGAGCCTGTCATTATTC 	341
------------------------TACGGTGAGCCTGTCATTATT 	103
------------------------TACGGTGAGCCTGTCATTATTCA 	16
------------------------TACGGTGAGCCTGTCATTAT 	10
------------------------TACGGTGAGCCTGTCATTA 	3
-------------------------ACGGTGAGCCTGTCATTATT 	1
-------------------------ACGGTGAGCCTGTCATTATTC 	9
--------------------------CGGTGAGCCTGTCATTATTC 	4
---------------------------GGTGAGCCTGTCATTATTC 	6
---------------------------GGTGAGCCTGTCATTATTCA 	1
----------------------------GTGAGCCTGTCATTATTCA 	1
--------------------------------------------------AGGCTAGATCCTCTGTGTT 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGT 	6
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGT 	2
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGG 	3
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	98
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	138
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	227
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	1630
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	212
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTCT 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	1
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	57
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGT 	1
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTG 	7
------------------------------------------------------------------------------CATGATGGGCTCCTCGGTG 	3
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGT 	20
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGTT 	1

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Mus musculus	GSM539848	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	2
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	11
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	2
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	1

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Mus musculus	GSM539872	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	18
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	2

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Mus musculus	GSM539853	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	5

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Mus musculus	GSM539871	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
------------------------TACGGTGAGCCTGTCATTATTC 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	2
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	2
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	15
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	2

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Mus musculus	GSM539878	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGT 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	18
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	220
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	14
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	32
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	17
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	25
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	5
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGT 	1

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Mus musculus	GSM539873	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGT 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	17
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	112
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	8
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	15
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	5
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	8
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	3
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGTT 	1

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Mus musculus	GSM539875	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
------------------------TACGGTGAGCCTGTCATTAT 	13
------------------------TACGGTGAGCCTGTCATTATTC 	51
------------------------TACGGTGAGCCTGTCATTATT 	45
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGT 	2
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGTTC 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGTT 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGT 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGG 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	52
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	63
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	5
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	130
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	727
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	33
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	20
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTG 	1

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Mus musculus	GSM539857	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	2
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	5
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	1

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Mus musculus	GSM539867	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
------------------------TACGGTGAGCCTGTCATTATTCA 	2
------------------------TACGGTGAGCCTGTCATTAT 	2
------------------------TACGGTGAGCCTGTCATTATTC 	49
------------------------TACGGTGAGCCTGTCATTATT 	18
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGT 	25
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTG 	2
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGG 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGTT 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGT 	2
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTCTC 	2
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTCT 	23
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	205
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	379
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	5172
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	282
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	123
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	137
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTTC 	16
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTTCT 	3
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTT 	19
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	376
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTG 	20
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGT 	3
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGTTC 	4
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGTT 	2
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGT 	25

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Mus musculus	GSM539876	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
------------------------TACGGTGAGCCTGTCATTAT 	1
------------------------TACGGTGAGCCTGTCATTATTC 	3
------------------------TACGGTGAGCCTGTCATTATT 	7
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTG 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	7
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	284
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	45
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	28
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	44
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	18
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	11
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTG 	3

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
21	Mus musculus	GSM539854	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
------------------------TACGGTGAGCCTGTCATTATTC 	5
------------------------TACGGTGAGCCTGTCATTATT 	5
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGT 	7
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	64
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	46
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	569
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	33
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	45
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	14
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTT 	1
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	31
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGT 	3
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTG 	1
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGT 	2

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
22	Mus musculus	GSM527279-2112	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
---GACCCAATGCCCGGGGAGAAG 	1
------------------------TACGGTGAGCCTGTCATTATTCA 	4
------------------------TACGGTGAGCCTGTCATTAT 	6
------------------------TACGGTGAGCCTGTCATTATTC 	244
------------------------TACGGTGAGCCTGTCATTA 	1
------------------------TACGGTGAGCCTGTCATTATT 	62
-------------------------ACGGTGAGCCTGTCATTAT 	1
-------------------------ACGGTGAGCCTGTCATTATTC 	1
-------------------------ACGGTGAGCCTGTCATTATT 	1
--------------------------CGGTGAGCCTGTCATTATTC 	2
---------------------------GGTGAGCCTGTCATTATTC 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGT 	12
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGT 	1
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTG 	2
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGG 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	2129
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	232
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTCT 	1
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	111
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	165
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	214
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	93
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGT 	2
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTG 	4
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTT 	2
------------------------------------------------------------------------------CATGATGGGCTCCTCGGTGT 	4
------------------------------------------------------------------------------CATGATGGGCTCCTCGGTG 	4
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGT 	23
-------------------------------------------------------------------------------ATGATGGGCTCCTCGGTGTT 	1

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
23	Mus musculus	GSM539874	ATCATGATGGGCTCCTCGGTGT	AGTACGGTGAGCCTGTCATTATTC	down	5	0

Secondary structure

GAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGCACCA
------------------------TACGGTGAGCCTGTCATTATT 	25
------------------------TACGGTGAGCCTGTCATTAT 	5
------------------------TACGGTGAGCCTGTCATTA 	5
------------------------TACGGTGAGCCTGTCATTATTCA 	2
------------------------TACGGTGAGCCTGTCATTATTC 	28
---------------------------------------------------------------------------GATCATGATGGGCTCCTCGGTGT 	3
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTTC 	24
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGT 	961
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTG 	77
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGT 	47
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGGTGTT 	167
----------------------------------------------------------------------------ATCATGATGGGCTCCTCGG 	48
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTTC 	3
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGTT 	5
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTGT 	36
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGTG 	3
-----------------------------------------------------------------------------TCATGATGGGCTCCTCGGT 	1

Overlaps with: MNEST030375
Overlaps with miRBase pre-miRNAs: cfa-mir-433 ppy-mir-433 rno-mir-433 hsa-mir-433 ggo-mir-433 ptr-mir-433
HuntMi prediction: true miRNA