miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

miRNEST 2.0: an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: ATTGGGAACATTTTGCATGCAT

selected species: Mus musculus

22 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Mus musculus	GSM539868	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
---------------------------------------------------------TATTGGGAACATTTTGCATGCA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	10

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Mus musculus	GSM539877-5198	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATACA 	2
----------------------TTTTGCAGTATGTTCCTGAATAC 	1
----------------------TTTTGCAGTATGTTCCTGAAT 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	8
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	2

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Mus musculus	GSM539838	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATAC 	4
----------------------TTTTGCAGTATGTTCCTGAAT 	1
----------------------TTTTGCAGTATGTTCCTGAATACA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	30
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	3
-----------------------------------------------------------TTGGGAACATTTTGCATGCA 	1

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Mus musculus	GSM539850	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
TAGGAATCAGATACAGAATTAT 	1
----------------------TTTTGCAGTATGTTCCTGAATA 	1
----------------------TTTTGCAGTATGTTCCTGAAT 	2
----------------------TTTTGCAGTATGTTCCTGA 	2
----------------------TTTTGCAGTATGTTCCTGAATACA 	2
----------------------TTTTGCAGTATGTTCCTGAATAC 	6
----------------------TTTTGCAGTATGTTCCTGAA 	13
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	15
---------------------------------------------------------TATTGGGAACATTTTGCATG 	3
---------------------------------------------------------TATTGGGAACATTTTGCAT 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	249
----------------------------------------------------------ATTGGGAACATTTTGCATGCA 	7
----------------------------------------------------------ATTGGGAACATTTTGCATGC 	2
----------------------------------------------------------ATTGGGAACATTTTGCATG 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCATA 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	28

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Mus musculus	GSM539835	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAAT 	2
----------------------TTTTGCAGTATGTTCCTGAA 	1
----------------------TTTTGCAGTATGTTCCTGAATAC 	27
----------------------TTTTGCAGTATGTTCCTGAATA 	2
----------------------TTTTGCAGTATGTTCCTGAATACA 	4
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	3
---------------------------------------------------------TATTGGGAACATTTTGCATGCA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	51
----------------------------------------------------------ATTGGGAACATTTTGCATGCATAA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCATA 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	10

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Mus musculus	GSM539869	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATAC 	1
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	9

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Mus musculus	GSM539870	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATACA 	1
----------------------TTTTGCAGTATGTTCCTGAATAC 	9
----------------------TTTTGCAGTATGTTCCTGAATA 	2
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	3
----------------------------------------------------------ATTGGGAACATTTTGCATGCATAA 	2
----------------------------------------------------------ATTGGGAACATTTTGCATGCATA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	81
----------------------------------------------------------ATTGGGAACATTTTGCATGCA 	7
----------------------------------------------------------ATTGGGAACATTTTGCATGC 	2
-----------------------------------------------------------TTGGGAACATTTTGCATGCATA 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	3

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Mus musculus	GSM539849	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATACA 	2
----------------------TTTTGCAGTATGTTCCTGAATAC 	14
----------------------TTTTGCAGTATGTTCCTGAATA 	2
----------------------TTTTGCAGTATGTTCCTGAAT 	11
----------------------TTTTGCAGTATGTTCCTGAA 	2
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	1
---------------------------------------------------------TATTGGGAACATTTTGCATGCA 	2
---------------------------------------------------------TATTGGGAACATTTTGCAT 	1
---------------------------------------------------------TATTGGGAACATTTTGCATG 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCATA 	2
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	93
----------------------------------------------------------ATTGGGAACATTTTGCATGCA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGC 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	23

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Mus musculus	GSM539848	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATAC 	39
----------------------TTTTGCAGTATGTTCCTGAAT 	24
----------------------TTTTGCAGTATGTTCCTGAA 	3
----------------------TTTTGCAGTATGTTCCTGA 	1
----------------------TTTTGCAGTATGTTCCTGAATA 	8
----------------------TTTTGCAGTATGTTCCTGAATACA 	6
----------------------TTTTGCAGTATGTTCCTGAATACAT 	1
---------------------------------------------------------TATTGGGAACATTTTGCATGCA 	5
---------------------------------------------------------TATTGGGAACATTTTGCAT 	3
---------------------------------------------------------TATTGGGAACATTTTGCATG 	1
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCATAA 	3
----------------------------------------------------------ATTGGGAACATTTTGCATGCA 	2
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	117
----------------------------------------------------------ATTGGGAACATTTTGCATGC 	4
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	21
-----------------------------------------------------------TTGGGAACATTTTGCATGC 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCATA 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCA 	1

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Mus musculus	GSM539864	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAAT 	1
----------------------TTTTGCAGTATGTTCCTGAA 	2
----------------------TTTTGCAGTATGTTCCTGAATAC 	2
----------------------TTTTGCAGTATGTTCCTGAATA 	1
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	1
---------------------------------------------------------TATTGGGAACATTTTGCATGCA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGC 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	29
----------------------------------------------------------ATTGGGAACATTTTGCATGCA 	2
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	4

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Mus musculus	GSM539872	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAAT 	1
----------------------TTTTGCAGTATGTTCCTGAATACA 	1
----------------------TTTTGCAGTATGTTCCTGAATAC 	4
---------------------------------------------------------TATTGGGAACATTTTGCATG 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	62
----------------------------------------------------------ATTGGGAACATTTTGCATGC 	5
----------------------------------------------------------ATTGGGAACATTTTGCATGCA 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	6
-----------------------------------------------------------TTGGGAACATTTTGCATGCA 	1

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Mus musculus	GSM539861	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATAC 	6
----------------------TTTTGCAGTATGTTCCTGAAT 	2
----------------------TTTTGCAGTATGTTCCTGAATACA 	3
----------------------TTTTGCAGTATGTTCCTGAATA 	2
----------------------TTTTGCAGTATGTTCCTGAA 	10
----------------------TTTTGCAGTATGTTCCTGA 	2
---------------------------------------------------------TATTGGGAACATTTTGCAT 	2
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	2
---------------------------------------------------------TATTGGGAACATTTTGCATGCA 	3
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	32
----------------------------------------------------------ATTGGGAACATTTTGCATG 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	5

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Mus musculus	GSM539853	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATAC 	6
----------------------TTTTGCAGTATGTTCCTGAATA 	2
----------------------TTTTGCAGTATGTTCCTGAAT 	8
----------------------TTTTGCAGTATGTTCCTGAATACA 	5
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	2
---------------------------------------------------------TATTGGGAACATTTTGCATGCA 	3
---------------------------------------------------------TATTGGGAACATTTTGCAT 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	30
----------------------------------------------------------ATTGGGAACATTTTGCATGC 	2
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	2
-----------------------------------------------------------TTGGGAACATTTTGCATGCATA 	1

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Mus musculus	GSM539871	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATAC 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	11
----------------------------------------------------------ATTGGGAACATTTTGCATG 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	1

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Mus musculus	GSM539878	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATACA 	1
----------------------TTTTGCAGTATGTTCCTGAATAC 	7
----------------------TTTTGCAGTATGTTCCTGAATA 	2
----------------------TTTTGCAGTATGTTCCTGAAT 	3
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	7
---------------------------------------------------------TATTGGGAACATTTTGCATGCA 	3
---------------------------------------------------------TATTGGGAACATTTTGCATG 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCATAA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCATA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	127
----------------------------------------------------------ATTGGGAACATTTTGCATGCA 	3
----------------------------------------------------------ATTGGGAACATTTTGCATGC 	9
----------------------------------------------------------ATTGGGAACATTTTGCATG 	3
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	14

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Mus musculus	GSM539873	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATAC 	1
----------------------TTTTGCAGTATGTTCCTGAAT 	1
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	2
---------------------------------------------------------TATTGGGAACATTTTGCATGCA 	1
---------------------------------------------------------TATTGGGAACATTTTGCAT 	2
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	11
----------------------------------------------------------ATTGGGAACATTTTGCATGCA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATG 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	2
-----------------------------------------------------------TTGGGAACATTTTGCATGCA 	1

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Mus musculus	GSM539875	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATAC 	7
----------------------TTTTGCAGTATGTTCCTGAA 	19
----------------------TTTTGCAGTATGTTCCTGA 	5
----------------------TTTTGCAGTATGTTCCTGAAT 	6
---------------------------------------------------------TATTGGGAACATTTTGCAT 	1
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	2
---------------------------------------------------------TATTGGGAACATTTTGCATGCA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	76
----------------------------------------------------------ATTGGGAACATTTTGCATGCA 	2
----------------------------------------------------------ATTGGGAACATTTTGCATGCATA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATG 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	13
-----------------------------------------------------------TTGGGAACATTTTGCATGCATA 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCA 	1

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Mus musculus	GSM539857	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATAC 	1
----------------------TTTTGCAGTATGTTCCTGAAT 	1
----------------------TTTTGCAGTATGTTCCTGAA 	4
----------------------TTTTGCAGTATGTTCCTGA 	3
---------------------------------------------------------TATTGGGAACATTTTGCATGCA 	2
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	17
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	1

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Mus musculus	GSM539867	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATAC 	6
----------------------TTTTGCAGTATGTTCCTGAATA 	2
----------------------TTTTGCAGTATGTTCCTGAAT 	2
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	3
----------------------------------------------------------ATTGGGAACATTTTGCATGCATA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	44
----------------------------------------------------------ATTGGGAACATTTTGCATGCA 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCATAA 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCATA 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	4

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Mus musculus	GSM539876	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATACA 	2
----------------------TTTTGCAGTATGTTCCTGAATAC 	12
----------------------TTTTGCAGTATGTTCCTGAA 	13
----------------------TTTTGCAGTATGTTCCTGA 	5
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	3
---------------------------------------------------------TATTGGGAACATTTTGCATGC 	1
---------------------------------------------------------TATTGGGAACATTTTGCATG 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCATA 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	51
----------------------------------------------------------ATTGGGAACATTTTGCATGCA 	3
----------------------------------------------------------ATTGGGAACATTTTGCATG 	3
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	9
-----------------------------------------------------------TTGGGAACATTTTGCATGCA 	1

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
21	Mus musculus	GSM539854	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATAC 	7
---------------------------------------------------------TATTGGGAACATTTTGCATGCA 	4
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	23
----------------------------------------------------------ATTGGGAACATTTTGCATGC 	2
-----------------------------------------------------------TTGGGAACATTTTGCATGCATAA 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	4

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
22	Mus musculus	GSM539874	ATTGGGAACATTTTGCATGCAT	TTTTGCAGTATGTTCCTGAATAC	down	4	1

Secondary structure

TAGGAATCAGATACAGAATTATTTTTGCAGTATGTTCCTGAATACATAACATAAGCGTATTGGGAACATTTTGCATGCATAATTTTGTATCAATATATG
----------------------TTTTGCAGTATGTTCCTGAATACA 	3
----------------------TTTTGCAGTATGTTCCTGAATAC 	12
----------------------TTTTGCAGTATGTTCCTGAAT 	1
----------------------TTTTGCAGTATGTTCCTGAA 	9
----------------------TTTTGCAGTATGTTCCTGA 	1
---------------------------------------------------------TATTGGGAACATTTTGCATGCAT 	6
---------------------------------------------------------TATTGGGAACATTTTGCATGCA 	4
---------------------------------------------------------TATTGGGAACATTTTGCATGC 	1
----------------------------------------------------------ATTGGGAACATTTTGCATGCATA 	2
----------------------------------------------------------ATTGGGAACATTTTGCATGCAT 	109
----------------------------------------------------------ATTGGGAACATTTTGCATGCA 	6
----------------------------------------------------------ATTGGGAACATTTTGCATGC 	3
----------------------------------------------------------ATTGGGAACATTTTGCATG 	1
-----------------------------------------------------------TTGGGAACATTTTGCATGCATA 	2
-----------------------------------------------------------TTGGGAACATTTTGCATGCAT 	21
-----------------------------------------------------------TTGGGAACATTTTGCATGC 	1

Overlaps with: MNEST032082 MNEST032083
Overlaps with miRBase pre-miRNAs: mmu-mir-450b
HuntMi prediction: true miRNA