miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

miRNEST 2.0: an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: CAGTGCAATGTTAAAAGGGCAT

selected species: Mus musculus

21 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Mus musculus	GSM527274-2107	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
--TGCCTTTGCTGCTGGCCGGA 	1
---------------------AGCTCTTTTCACATTGTGCT 	1
---------------------AGCTCTTTTCACATTGTGCTAC 	1
----------------------GCTCTTTTCACATTGTGCT 	1
----------------------GCTCTTTTCACATTGTGCTAC 	5
----------------------GCTCTTTTCACATTGTGCTACT 	6
------------------------TCTTTTCACATTGTGCTACT 	2
------------------------------------------------------------GCAGTGCAATGTTAAAAGGGCA 	1
------------------------------------------------------------GCAGTGCAATGTTAAAAGGGCAT 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	615
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	130
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATC 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	151
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	33
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCA 	33
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	175
--------------------------------------------------------------AGTGCAATGTTAAAAGGGC 	40
---------------------------------------------------------------GTGCAATGTTAAAAGGGCAT 	1
----------------------------------------------------------------TGCAATGTTAAAAGGGCAT 	3

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Mus musculus	GSM527280	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
---------------------AGCTCTTTTCACATTGTGC 	1
----------------------GCTCTTTTCACATTGTGCTAC 	2
----------------------GCTCTTTTCACATTGTGCT 	1
------------------------------------------------------------GCAGTGCAATGTTAAAAGGGCAT 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	237
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	52
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	45
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	20
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	46
--------------------------------------------------------------AGTGCAATGTTAAAAGGGC 	10
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCA 	9

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Mus musculus	GSM539868	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATCGG 	2
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	206
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	44
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	2
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	1

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Mus musculus	GSM539877-5198	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	115
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	24
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	3
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	2
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	3

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Mus musculus	GSM539838	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	7
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	1

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Mus musculus	GSM539835	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	243
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	18
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATC 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	1

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Mus musculus	GSM527276	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
----------------------GCTCTTTTCACATTGTGCTACT 	2
----------------------GCTCTTTTCACATTGTGCT 	1
------------------------------------------------------------GCAGTGCAATGTTAAAAGGGCAT 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	434
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	99
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	78
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	26
--------------------------------------------------------------AGTGCAATGTTAAAAGGGC 	10
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	51
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCA 	13
---------------------------------------------------------------GTGCAATGTTAAAAGGGCAT 	1

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Mus musculus	GSM539869	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
----------------------GCTCTTTTCACATTGTGCTA 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	699
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	188
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATCG 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	8
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	2

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Mus musculus	GSM539870	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
----------------------GCTCTTTTCACATTGTGCTACT 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATC 	5
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	1812
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	467
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	19
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	9
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	7

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Mus musculus	GSM527277-2110	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
---------------------AGCTCTTTTCACATTGTGCTAC 	1
----------------------GCTCTTTTCACATTGTGCT 	1
----------------------GCTCTTTTCACATTGTGCTACTG 	2
----------------------GCTCTTTTCACATTGTGCTA 	1
----------------------GCTCTTTTCACATTGTGCTAC 	11
----------------------GCTCTTTTCACATTGTGCTACT 	20
------------------------------------------------------------GCAGTGCAATGTTAAAAGGGC 	1
------------------------------------------------------------GCAGTGCAATGTTAAAAGGGCAT 	4
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	1365
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATC 	4
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	286
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	315
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	103
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCATC 	1
--------------------------------------------------------------AGTGCAATGTTAAAAGGGC 	46
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCA 	43
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	182
---------------------------------------------------------------GTGCAATGTTAAAAGGGCA 	2
---------------------------------------------------------------GTGCAATGTTAAAAGGGCAT 	6

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Mus musculus	GSM539848	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
----------------------GCTCTTTTCACATTGTGCTAC 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	580
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	106
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATC 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	8
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	2
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	4

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Mus musculus	GSM539872	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	1867
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	308
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATC 	9
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	58
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	11
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATCGG 	1
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	8

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Mus musculus	GSM539853	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	40
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	1
--------------------------------------------------------------AGTGCAATGTTAAAAGGGC 	1

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Mus musculus	GSM539871	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
----------------------GCTCTTTTCACATTGTGCTAC 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATCG 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATC 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	1295
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	145
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	10
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	5
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	4

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Mus musculus	GSM539878	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
----------------------GCTCTTTTCACATTGTGCTACT 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATCGG 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	1138
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	144
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	32
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	12
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	5
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCA 	1
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCATC 	1

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Mus musculus	GSM539873	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	285
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	64
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	7
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	2

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Mus musculus	GSM539867	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
CATGCCTTTGCTGCTGGCCGGA 	1
---------------------AGCTCTTTTCACATTGTGCTAC 	2
----------------------GCTCTTTTCACATTGTGCTAC 	3
----------------------GCTCTTTTCACATTGTGCTACT 	17
------------------------------------------------------------GCAGTGCAATGTTAAAAGGGCAT 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATC 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	2000
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	152
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	27
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	6
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	10
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCA 	1

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Mus musculus	GSM539876	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	60
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	9
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	25
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	15
--------------------------------------------------------------AGTGCAATGTTAAAAGGGC 	1

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Mus musculus	GSM539854	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
----------------------GCTCTTTTCACATTGTGCTACT 	3
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATC 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	368
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	54
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	5
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATCG 	1
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	3

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Mus musculus	GSM527279-2112	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
---------------------AGCTCTTTTCACATTGTGCT 	2
----------------------GCTCTTTTCACATTGTGCTA 	2
----------------------GCTCTTTTCACATTGTGCTAC 	4
----------------------GCTCTTTTCACATTGTGCTACT 	12
------------------------------------------------------------GCAGTGCAATGTTAAAAGGG 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	779
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	167
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	161
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	54
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCA 	20
--------------------------------------------------------------AGTGCAATGTTAAAAGGGC 	47
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	178
---------------------------------------------------------------GTGCAATGTTAAAAGGGCA 	1
---------------------------------------------------------------GTGCAATGTTAAAAGGGCAT 	2

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
21	Mus musculus	GSM539874	CAGTGCAATGTTAAAAGGGCAT	GCTCTTTTCACATTGTGCTACT	down	3	0

Secondary structure

CATGCCTTTGCTGCTGGCCGGAGCTCTTTTCACATTGTGCTACTGTCTAACGTGTACCGAGCAGTGCAATGTTAAAAGGGCATCGGCCTTGTAGTACTACCC
----------------------GCTCTTTTCACATTGTGCTAC 	1
----------------------GCTCTTTTCACATTGTGCTACT 	3
------------------------------------------------------------GCAGTGCAATGTTAAAAGGGCAT 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCAT 	266
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCA 	45
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGC 	124
-------------------------------------------------------------CAGTGCAATGTTAAAAGGG 	57
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATCG 	1
-------------------------------------------------------------CAGTGCAATGTTAAAAGGGCATC 	1
--------------------------------------------------------------AGTGCAATGTTAAAAGGGCAT 	2
--------------------------------------------------------------AGTGCAATGTTAAAAGGGC 	1

Overlaps with: MNEST031856
Overlaps with miRBase pre-miRNAs: mmu-mir-130a
HuntMi prediction: true miRNA