miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: CATAAAGTAGAAAGCACTACT

selected species: Ornithorhynchus anatinus



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Ornithorhynchus anatinus GSM266831-2116 CATAAAGTAGAAAGCACTACT TAGTGTTTCCTACTTTATGGA up 2 0


Secondary structure

CAGACAGACAGTGCAGTCATCCATAAAGTAGAAAGCACTACTAACAGCGCTGTAGGGTGTAGTGTTTCCTACTTTATGGATGAGTGTACTGTGGGCTT
--GACAGACAGTGCAGTCATC 	1
-------------------TCCATAAAGTAGAAAGCACTAC 	3
-------------------TCCATAAAGTAGAAAGCACTA 	8
-------------------TCCATAAAGTAGAAAGCACT 	1
-------------------TCCATAAAGTAGAAAGCAC 	1
---------------------CATAAAGTAGAAAGCACTACTA 	5
---------------------CATAAAGTAGAAAGCACTACT 	31
---------------------CATAAAGTAGAAAGCACTAC 	10
---------------------CATAAAGTAGAAAGCACTA 	2
----------------------ATAAAGTAGAAAGCACTACTAA 	1
----------------------ATAAAGTAGAAAGCACTACT 	4
---------------------------------------------------------TGTAGTGTTTCCTACTTTATGGA 	6
---------------------------------------------------------TGTAGTGTTTCCTACTTTATG 	1
----------------------------------------------------------GTAGTGTTTCCTACTTTATGGA 	3

Overlaps with: MNEST031499
Overlaps with miRBase pre-miRNAs: oan-mir-142
HuntMi prediction: true miRNA