miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: CATACAAGGATAATTTCTTTTT

selected species: Mus musculus



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Mus musculus GSM539854 CATACAAGGATAATTTCTTTTT GGAGAAATTATCCTTGGTGTGTT down 0 1


Secondary structure

TGTGCTACTGTTTCATACTTGAGGAGAAATTATCCTTGGTGTGTTGGCTCTTTTGGATGAATCATACAAGGATAATTTCTTTTTGAGTATCAAATACTGCCCT
----------------------GGAGAAATTATCCTTGGTGTGT 	1
--------------------------------------------------------------CATACAAGGATAATTTCTTTTT 	7
---------------------------------------------------------------ATACAAGGATAATTTCTTTTT 	1

Overlaps with: MNEST032201 MNEST032202
Overlaps with miRBase pre-miRNAs: mmu-mir-539
HuntMi prediction: true miRNA