miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: CATCACAGTCTGAGTTCTTGC

selected species: Drosophila melanogaster

24 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Drosophila melanogaster	GSM360257-14325	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGACCCG 	2
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	240
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	26
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	1
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	2

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Drosophila melanogaster	GSM399107-16288	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGACCCG 	40
----------------------CAAGAACTTTCTCTGTGACC 	1
----------------------CAAGAACTTTCTCTGTGACCC 	3
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	2
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	218
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	10299
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	2493
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	24
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	23
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	3
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	4

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Drosophila melanogaster	GSM399106-16287	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGAC 	1
----------------------CAAGAACTTTCTCTGTGACCCG 	34
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	4774
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	10
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	134
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	1712
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	1
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	12
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	4
---------------------------------------------------------------TCACAGTCTGAGTTCTTGC 	2
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	1

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Drosophila melanogaster	GSM466487_wt_total	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGACC 	3
----------------------CAAGAACTTTCTCTGTGACCCG 	88
----------------------CAAGAACTTTCTCTGTGACCC 	11
-----------------------AAGAACTTTCTCTGTGACCCG 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	16973
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	12
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	124
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	1128
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	3156
--------------------------------------------------------------ATCACAGTCTGAGTTCTTG 	13
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	35
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	215
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	14
---------------------------------------------------------------TCACAGTCTGAGTTCTTGC 	2
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	13

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Drosophila melanogaster	GSM399105-16286	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGACCCG 	26
----------------------CAAGAACTTTCTCTGTGACCC 	5
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	27
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	1823
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	416
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	2
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	1
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	7

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Drosophila melanogaster	GSM360262-14327	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
---CTATGTGAGGCGCACTTGT 	1
----------------------CAAGAACTTTCTCTGTGACCCGCG 	2
----------------------CAAGAACTTTCTCTGTGACCCG 	93
----------------------CAAGAACTTTCTCTGTGACCC 	5
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTGA 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	71
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	8288
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	903
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	5
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	18
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	3
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	4

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Drosophila melanogaster	GSM385822-16273	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGAC 	2
----------------------CAAGAACTTTCTCTGTGACC 	9
----------------------CAAGAACTTTCTCTGTGACCCG 	30
----------------------CAAGAACTTTCTCTGTGACCC 	3
------------------------------------------------------------GCATCACAGTCTGAGTTCTTGCT 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	10994
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTGA 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	9
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	74
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	266
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	2652
--------------------------------------------------------------ATCACAGTCTGAGTTCTTG 	4
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	13
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	67
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	2
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	12

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Drosophila melanogaster	GSM360256-14324	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
-ATCTATGTGAGGCGCACTTGT 	1
----------------------CAAGAACTTTCTCTGTGACCCG 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	625
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	46
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	3

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Drosophila melanogaster	GSM466494_r2d2_heterozygotes_untreated	CATCACAGTCTGAGTTCTTGC	AAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

ATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAA
---------------------CAAGAACTTTCTCTGTGACC 	2
---------------------CAAGAACTTTCTCTGTGACCCG 	84
---------------------CAAGAACTTTCTCTGTGACCC 	1
----------------------AAGAACTTTCTCTGTGACCCG 	1
-----------------------AGAACTTTCTCTGTGACCCGCGT 	3
----------------------------------------------------------CGCATCACAGTCTGAGTTCTTG 	1
----------------------------------------------------------CGCATCACAGTCTGAGTTC 	1
-----------------------------------------------------------GCATCACAGTCTGAGTTCTTG 	1
------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	3036
------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	17
------------------------------------------------------------CATCACAGTCTGAGTTCTT 	226
------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	1674
------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	4802
-------------------------------------------------------------ATCACAGTCTGAGTTCTTG 	24
-------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	70
-------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	44

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Drosophila melanogaster	GSM466496_r2d2_homozygotes_untreated	CATCACAGTCTGAGTTCTTGC	AAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

ATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAA
---------------------CAAGAACTTTCTCTGTGAC 	1
---------------------CAAGAACTTTCTCTGTGACC 	5
---------------------CAAGAACTTTCTCTGTGACCCG 	209
---------------------CAAGAACTTTCTCTGTGACCC 	31
----------------------AAGAACTTTCTCTGTGACC 	2
-----------------------------------------------------------GCATCACAGTCTGAGTTCTTGCT 	2
------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	3460
------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	20
------------------------------------------------------------CATCACAGTCTGAGTTCTT 	365
------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	2483
------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	7912
-------------------------------------------------------------ATCACAGTCTGAGTTCTTG 	23
-------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	101
-------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	73
--------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	1
--------------------------------------------------------------TCACAGTCTGAGTTCTTGC 	2
---------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	1

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Drosophila melanogaster	GSM286605-9793	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGACCCGCG 	2
----------------------CAAGAACTTTCTCTGTGACCCG 	327
----------------------CAAGAACTTTCTCTGTGACCC 	9
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	3925
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	48
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	390
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	13
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	4

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Drosophila melanogaster	GSM343833-15151	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
---------------------TCAAGAACTTTCTCTGTGACCCG 	1
----------------------CAAGAACTTTCTCTGTGACC 	11
----------------------CAAGAACTTTCTCTGTGACCCGCG 	4
----------------------CAAGAACTTTCTCTGTGACCCG 	373
----------------------CAAGAACTTTCTCTGTGACCC 	1
-----------------------AAGAACTTTCTCTGTGACCCG 	3
-----------------------------------------------------------CGCATCACAGTCTGAGTTCTTGC 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	2
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	30295
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	188
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	2008
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	14939
--------------------------------------------------------------ATCACAGTCTGAGTTCTTG 	18
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	286
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	869
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	4
---------------------------------------------------------------TCACAGTCTGAGTTCTTGC 	2
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	6

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Drosophila melanogaster	GSM343832-15149	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
---CTATGTGAGGCGCACTTGT 	2
---------------------TCAAGAACTTTCTCTGTGACCC 	1
----------------------CAAGAACTTTCTCTGTGAC 	1
----------------------CAAGAACTTTCTCTGTGACC 	13
----------------------CAAGAACTTTCTCTGTGACCCGCG 	3
----------------------CAAGAACTTTCTCTGTGACCCG 	335
----------------------CAAGAACTTTCTCTGTGACCC 	13
-----------------------AAGAACTTTCTCTGTGACC 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	2
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	41240
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	177
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	1789
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	13461
--------------------------------------------------------------ATCACAGTCTGAGTTCTTG 	22
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	208
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	1011
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	15
---------------------------------------------------------------TCACAGTCTGAGTTCTTGC 	1
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	8

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Drosophila melanogaster	GSM399100-5263	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGACC 	9
----------------------CAAGAACTTTCTCTGTGACCCGC 	3
----------------------CAAGAACTTTCTCTGTGACCCGCG 	1
----------------------CAAGAACTTTCTCTGTGACCCG 	355
----------------------CAAGAACTTTCTCTGTGACCC 	5
-----------------------AAGAACTTTCTCTGTGACCC 	1
-----------------------AAGAACTTTCTCTGTGACCCG 	2
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	5
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	32951
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	297
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	2118
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	21846
--------------------------------------------------------------ATCACAGTCTGAGTTCTTG 	40
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	283
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	673
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	8
---------------------------------------------------------------TCACAGTCTGAGTTCTTGC 	2
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	2

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Drosophila melanogaster	GSM360260-14326	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGACCCGCG 	1
----------------------CAAGAACTTTCTCTGTGACCCG 	74
----------------------CAAGAACTTTCTCTGTGACC 	2
----------------------CAAGAACTTTCTCTGTGACCC 	3
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	60
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	7237
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	851
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	4
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	19
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	4
---------------------------------------------------------------TCACAGTCTGAGTTCTTGC 	1
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	1

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Drosophila melanogaster	GSM322543-14323	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGACCCG 	119
----------------------CAAGAACTTTCTCTGTGACCC 	5
----------------------CAAGAACTTTCTCTGTGACC 	6
----------------------CAAGAACTTTCTCTGTGACCCGC 	4
-----------------------------------------------------------CGCATCACAGTCTGAGTTCTT 	7
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	15
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	2756
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	233
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	56
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	10300
--------------------------------------------------------------ATCACAGTCTGAGTTCTTG 	1
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	3
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	18
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	5
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	3

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Drosophila melanogaster	GSM286607-9796	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
---CTATGTGAGGCGCACTTGT 	3
----------------------CAAGAACTTTCTCTGTGACCCGCG 	3
----------------------CAAGAACTTTCTCTGTGACCCG 	225
----------------------CAAGAACTTTCTCTGTGAC 	2
----------------------CAAGAACTTTCTCTGTGACCC 	20
----------------------CAAGAACTTTCTCTGTGACCCGC 	1
-----------------------AAGAACTTTCTCTGTGACCCGC 	3
-----------------------------------------------------------CGCATCACAGTCTGAGTTCTTGC 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	6
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	41
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	5139
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	281
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	9

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Drosophila melanogaster	GSM399101-5265	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
--TCTATGTGAGGCGCACTTGT 	2
----------------------CAAGAACTTTCTCTGTGACC 	3
----------------------CAAGAACTTTCTCTGTGACCCGC 	2
----------------------CAAGAACTTTCTCTGTGACCCGCG 	1
----------------------CAAGAACTTTCTCTGTGACCCG 	353
----------------------CAAGAACTTTCTCTGTGACCC 	8
-----------------------AAGAACTTTCTCTGTGACCCG 	3
------------------------------------------------------------GCATCACAGTCTGAGTTCTTGC 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	6
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	41115
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	579
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	3469
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	23486
--------------------------------------------------------------ATCACAGTCTGAGTTCTTG 	40
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	336
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	962
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	7
---------------------------------------------------------------TCACAGTCTGAGTTCTTGC 	2
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	5

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Drosophila melanogaster	GSM286604-9792	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGACCCG 	71
----------------------CAAGAACTTTCTCTGTGACCC 	2
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	4
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	114
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	3450
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	1058
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	1
--------------------------------------------------------------ATCACAGTCTGAGTTCTTG 	1
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	5

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Drosophila melanogaster	GSM385744-16261	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGACC 	3
----------------------CAAGAACTTTCTCTGTGACCCG 	20
----------------------CAAGAACTTTCTCTGTGACCC 	12
-----------------------AAGAACTTTCTCTGTGACCC 	1
-----------------------AAGAACTTTCTCTGTGACCCG 	1
------------------------------------------------------------GCATCACAGTCTGAGTTCTTGCT 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	9969
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTGA 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	3
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	58
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	241
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	2543
--------------------------------------------------------------ATCACAGTCTGAGTTCTTG 	1
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	15
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	61
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	3
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	4

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
21	Drosophila melanogaster	GSM322208-14317	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGAC 	2
----------------------CAAGAACTTTCTCTGTGACC 	1
----------------------CAAGAACTTTCTCTGTGACCCGC 	1
----------------------CAAGAACTTTCTCTGTGACCCG 	43
----------------------CAAGAACTTTCTCTGTGACCC 	2
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTGA 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTGAG 	3
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	2489
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	68
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	198
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	470
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTGAGT 	1
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	8
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	2
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	1

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
22	Drosophila melanogaster	GSM385748-16264	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGACCCG 	55
----------------------CAAGAACTTTCTCTGTGACCC 	22
----------------------CAAGAACTTTCTCTGTGAC 	3
----------------------CAAGAACTTTCTCTGTGACC 	16
-----------------------AAGAACTTTCTCTGTGACCC 	1
-----------------------AAGAACTTTCTCTGTGACCCG 	1
------------------------------------------------------------GCATCACAGTCTGAGTTCTTGCT 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	15
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	127
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	21359
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTGA 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	544
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	5412
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	34
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	134
--------------------------------------------------------------ATCACAGTCTGAGTTCTTG 	3
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	7
---------------------------------------------------------------TCACAGTCTGAGTTCTTGC 	1
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	16

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
23	Drosophila melanogaster	GSM399110-16285	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
---CTATGTGAGGCGCACTTGT 	4
----------------------CAAGAACTTTCTCTGTGACCCG 	432
----------------------CAAGAACTTTCTCTGTGAC 	16
----------------------CAAGAACTTTCTCTGTGACC 	74
----------------------CAAGAACTTTCTCTGTGACCC 	27
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	362
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	25894
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	3437
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	30
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	1
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	87
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	10
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	15

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
24	Drosophila melanogaster	GSM466492_dcr-2_homozygotes_untreated	CATCACAGTCTGAGTTCTTGCT	CAAGAACTTTCTCTGTGACCCGCG	down	5	2

Secondary structure

GATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAG
----------------------CAAGAACTTTCTCTGTGACCCGCG 	1
----------------------CAAGAACTTTCTCTGTGACCCG 	50
----------------------CAAGAACTTTCTCTGTGACCC 	12
----------------------CAAGAACTTTCTCTGTGACC 	1
----------------------CAAGAACTTTCTCTGTGACCCGC 	1
-----------------------------------------------------------CGCATCACAGTCTGAGTTCTTG 	1
------------------------------------------------------------GCATCACAGTCTGAGTTCTTGCT 	1
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCTG 	7
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGC 	2588
-------------------------------------------------------------CATCACAGTCTGAGTTCTTG 	968
-------------------------------------------------------------CATCACAGTCTGAGTTCTT 	85
-------------------------------------------------------------CATCACAGTCTGAGTTCTTGCT 	8840
--------------------------------------------------------------ATCACAGTCTGAGTTCTTG 	19
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGC 	35
--------------------------------------------------------------ATCACAGTCTGAGTTCTTGCT 	147
---------------------------------------------------------------TCACAGTCTGAGTTCTTGCT 	3
---------------------------------------------------------------TCACAGTCTGAGTTCTTGC 	2
----------------------------------------------------------------CACAGTCTGAGTTCTTGCT 	16

Overlaps with: MNEST036355 MNEST036356 MNEST037130 MNEST037206
Overlaps with miRBase pre-miRNAs: dse-mir-11 dsi-mir-11 dme-mir-11
HuntMi prediction: true miRNA