miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



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selected mature miRNA sequence: CATTGCACTTGTCCCGGCCTAT

selected species: Drosophila melanogaster



15 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM399106-16287 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAACGTTTT 	1
------------AGGACGGGAAGGTGTCAACGTTT 	9
------------AGGACGGGAAGGTGTCAACG 	32
------------AGGACGGGAAGGTGTCAAC 	3
------------AGGACGGGAAGGTGTCAACGT 	18
------------AGGACGGGAAGGTGTCAACGTT 	269
-------------GGACGGGAAGGTGTCAACGTT 	4
-------------GGACGGGAAGGTGTCAACGTTT 	1
--------------GACGGGAAGGTGTCAACGTT 	1
-------------------------------------------------ACATTGCACTTGTCCCGGCCTAT 	5
--------------------------------------------------CATTGCACTTGTCCCGGCCT 	72
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	247
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	2297
--------------------------------------------------CATTGCACTTGTCCCGGCC 	2
---------------------------------------------------ATTGCACTTGTCCCGGCCTAT 	7
---------------------------------------------------ATTGCACTTGTCCCGGCCT 	1
----------------------------------------------------TTGCACTTGTCCCGGCCTA 	1
----------------------------------------------------TTGCACTTGTCCCGGCCTAT 	3
-----------------------------------------------------TGCACTTGTCCCGGCCTAT 	1


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
2 Drosophila melanogaster GSM399105-16286 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAAC 	3
------------AGGACGGGAAGGTGTCAACGT 	20
------------AGGACGGGAAGGTGTCAACGTTT 	11
------------AGGACGGGAAGGTGTCAACGTT 	950
------------AGGACGGGAAGGTGTCAACG 	18
-------------GGACGGGAAGGTGTCAACGTT 	9
--------------GACGGGAAGGTGTCAACGTT 	2
-------------------------------------------------ACATTGCACTTGTCCCGGCCTAT 	5
-------------------------------------------------ACATTGCACTTGTCCCGGCCTA 	1
--------------------------------------------------CATTGCACTTGTCCCGGCCT 	112
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	256
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	2343
--------------------------------------------------CATTGCACTTGTCCCGGCC 	5
---------------------------------------------------ATTGCACTTGTCCCGGCCTAT 	7
----------------------------------------------------TTGCACTTGTCCCGGCCTAT 	2


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
3 Drosophila melanogaster GSM360262-14327 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAAC 	3
------------AGGACGGGAAGGTGTCAACGT 	18
------------AGGACGGGAAGGTGTCAACGTTT 	7
------------AGGACGGGAAGGTGTCAACGTT 	617
------------AGGACGGGAAGGTGTCAACG 	12
-------------GGACGGGAAGGTGTCAACGTT 	6
-------------GGACGGGAAGGTGTCAACGTTT 	1
-------------------------------------------------ACATTGCACTTGTCCCGGCCTAT 	12
--------------------------------------------------CATTGCACTTGTCCCGGCCT 	101
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	291
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	4838
--------------------------------------------------CATTGCACTTGTCCCGGCC 	9
---------------------------------------------------ATTGCACTTGTCCCGGCCTAT 	29


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
4 Drosophila melanogaster GSM385822-16273 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAACGTTTT 	2
------------AGGACGGGAAGGTGTCAACGTTT 	59
------------AGGACGGGAAGGTGTCAAC 	70
------------AGGACGGGAAGGTGTCAACGTT 	759
------------AGGACGGGAAGGTGTCAACG 	45
------------AGGACGGGAAGGTGTCAACGT 	214
-----------------------------------------------AAACATTGCACTTGTCCCGGCCTAT 	2
------------------------------------------------AACATTGCACTTGTCCCGGCCTAT 	2
-------------------------------------------------ACATTGCACTTGTCCCGGCCTA 	1
-------------------------------------------------ACATTGCACTTGTCCCGGCCTAT 	16
--------------------------------------------------CATTGCACTTGTCCCGGCCT 	570
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	912
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	19032
--------------------------------------------------CATTGCACTTGTCCCGGCC 	65
--------------------------------------------------CATTGCACTTGTCCCGGCCTATG 	20
---------------------------------------------------ATTGCACTTGTCCCGGCCT 	17
---------------------------------------------------ATTGCACTTGTCCCGGCCTAT 	473
---------------------------------------------------ATTGCACTTGTCCCGGCCTA 	19
---------------------------------------------------ATTGCACTTGTCCCGGCCTATG 	2
----------------------------------------------------TTGCACTTGTCCCGGCCTAT 	5
-----------------------------------------------------TGCACTTGTCCCGGCCTAT 	7


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
5 Drosophila melanogaster GSM360256-14324 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAAC 	4
------------AGGACGGGAAGGTGTCAACGT 	4
------------AGGACGGGAAGGTGTCAACG 	2
------------AGGACGGGAAGGTGTCAACGTT 	26
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	4
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	38


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
6 Drosophila melanogaster GSM466496_r2d2_homozygotes_untreated CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAACGTT 	1
------------AGGACGGGAAGGTGTCAACGT 	2
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	1
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	8


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
7 Drosophila melanogaster GSM286605-9793 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAACGTTTT 	6
------------AGGACGGGAAGGTGTCAACGTTT 	57
------------AGGACGGGAAGGTGTCAACG 	141
------------AGGACGGGAAGGTGTCAAC 	3
------------AGGACGGGAAGGTGTCAACGT 	82
------------AGGACGGGAAGGTGTCAACGTT 	3037
-------------GGACGGGAAGGTGTCAACGTT 	27
-------------GGACGGGAAGGTGTCAACG 	2
--------------GACGGGAAGGTGTCAACGTT 	4
-----------------------------------------------AAACATTGCACTTGTCCCGGCCTAT 	1
-------------------------------------------------ACATTGCACTTGTCCCGGCCT 	2
-------------------------------------------------ACATTGCACTTGTCCCGGCCTA 	4
-------------------------------------------------ACATTGCACTTGTCCCGGCCTAT 	12
--------------------------------------------------CATTGCACTTGTCCCGGCCT 	223
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	750
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	7033
--------------------------------------------------CATTGCACTTGTCCCGGCC 	6
---------------------------------------------------ATTGCACTTGTCCCGGCCTAT 	35
---------------------------------------------------ATTGCACTTGTCCCGGCCTA 	2
----------------------------------------------------TTGCACTTGTCCCGGCCTA 	1
----------------------------------------------------TTGCACTTGTCCCGGCCTAT 	7


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
8 Drosophila melanogaster GSM399100-5263 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAACGT 	2
------------AGGACGGGAAGGTGTCAACGTT 	2
--------------------------------------------------CATTGCACTTGTCCCGGCCT 	1
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	8


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
9 Drosophila melanogaster GSM360260-14326 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAAC 	2
------------AGGACGGGAAGGTGTCAACGT 	10
------------AGGACGGGAAGGTGTCAACGTTT 	1
------------AGGACGGGAAGGTGTCAACGTT 	289
------------AGGACGGGAAGGTGTCAACG 	6
-------------GGACGGGAAGGTGTCAACGTT 	2
-------------------------------------------------ACATTGCACTTGTCCCGGCCT 	2
-------------------------------------------------ACATTGCACTTGTCCCGGCCTAT 	12
--------------------------------------------------CATTGCACTTGTCCCGGCCT 	80
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	188
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	3213
--------------------------------------------------CATTGCACTTGTCCCGGCC 	5
---------------------------------------------------ATTGCACTTGTCCCGGCCTAT 	23
---------------------------------------------------ATTGCACTTGTCCCGGCCT 	1
----------------------------------------------------TTGCACTTGTCCCGGCCTAT 	2
-----------------------------------------------------TGCACTTGTCCCGGCCTAT 	3


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
10 Drosophila melanogaster GSM286607-9796 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAAC 	4
------------AGGACGGGAAGGTGTCAACGT 	51
------------AGGACGGGAAGGTGTCAACGTTT 	24
------------AGGACGGGAAGGTGTCAACG 	50
------------AGGACGGGAAGGTGTCAACGTT 	1946
-------------GGACGGGAAGGTGTCAACGTT 	29
--------------GACGGGAAGGTGTCAACGTT 	5
-------------------------------------------------ACATTGCACTTGTCCCGGCCTAT 	32
-------------------------------------------------ACATTGCACTTGTCCCGGCCTA 	5
--------------------------------------------------CATTGCACTTGTCCCGGCCT 	254
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	6380
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	548
--------------------------------------------------CATTGCACTTGTCCCGGCC 	15
--------------------------------------------------CATTGCACTTGTCCCGGCCTATG 	5
---------------------------------------------------ATTGCACTTGTCCCGGCCTAT 	42
----------------------------------------------------TTGCACTTGTCCCGGCCTAT 	4
-----------------------------------------------------TGCACTTGTCCCGGCCTAT 	1


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
11 Drosophila melanogaster GSM286604-9792 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAAC 	3
------------AGGACGGGAAGGTGTCAACGT 	39
------------AGGACGGGAAGGTGTCAACGTTT 	8
------------AGGACGGGAAGGTGTCAACG 	104
------------AGGACGGGAAGGTGTCAACGTT 	515
-------------GGACGGGAAGGTGTCAACGTT 	14
-------------GGACGGGAAGGTGTCAACGT 	1
-------------------------------------------------ACATTGCACTTGTCCCGGCCT 	1
-------------------------------------------------ACATTGCACTTGTCCCGGCCTAT 	3
--------------------------------------------------CATTGCACTTGTCCCGGCCT 	336
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	1032
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	7536
--------------------------------------------------CATTGCACTTGTCCCGGCC 	25
--------------------------------------------------CATTGCACTTGTCCCGGCCTATG 	3
---------------------------------------------------ATTGCACTTGTCCCGGCCTAT 	40
---------------------------------------------------ATTGCACTTGTCCCGGCCTA 	8
-----------------------------------------------------TGCACTTGTCCCGGCCTAT 	1


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
12 Drosophila melanogaster GSM385744-16261 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAACGTTTT 	4
------------AGGACGGGAAGGTGTCAACGTTT 	52
------------AGGACGGGAAGGTGTCAACGTTTTG 	1
------------AGGACGGGAAGGTGTCAAC 	71
------------AGGACGGGAAGGTGTCAACGTT 	723
------------AGGACGGGAAGGTGTCAACGTTTTGC 	1
------------AGGACGGGAAGGTGTCAACG 	41
------------AGGACGGGAAGGTGTCAACGT 	237
----------------------------------------------TAAACATTGCACTTGTCCCGGCCTAT 	1
-----------------------------------------------AAACATTGCACTTGTCCCGGCCTAT 	1
------------------------------------------------AACATTGCACTTGTCCCGGC 	1
-------------------------------------------------ACATTGCACTTGTCCCGGCCTA 	1
-------------------------------------------------ACATTGCACTTGTCCCGGCCTAT 	17
--------------------------------------------------CATTGCACTTGTCCCGGCCT 	689
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	1064
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	21144
--------------------------------------------------CATTGCACTTGTCCCGGCC 	106
--------------------------------------------------CATTGCACTTGTCCCGGCCTATG 	10
---------------------------------------------------ATTGCACTTGTCCCGGCCT 	14
---------------------------------------------------ATTGCACTTGTCCCGGCCTAT 	585
---------------------------------------------------ATTGCACTTGTCCCGGCCTA 	39
----------------------------------------------------TTGCACTTGTCCCGGCCTA 	1
----------------------------------------------------TTGCACTTGTCCCGGCCTAT 	12
-----------------------------------------------------TGCACTTGTCCCGGCCTAT 	19


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
13 Drosophila melanogaster GSM322208-14317 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAACGTTTT 	2
------------AGGACGGGAAGGTGTCAACGTTT 	4
------------AGGACGGGAAGGTGTCAACG 	12
------------AGGACGGGAAGGTGTCAAC 	6
------------AGGACGGGAAGGTGTCAACGT 	49
------------AGGACGGGAAGGTGTCAACGTT 	295
-------------GGACGGGAAGGTGTCAACGTT 	2
-------------GGACGGGAAGGTGTCAACGTTT 	1
--------------------------------------------------CATTGCACTTGTCCCGGCCT 	33
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	82
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	456
--------------------------------------------------CATTGCACTTGTCCCGGCC 	10
--------------------------------------------------CATTGCACTTGTCCCGGCCTATGG 	1
--------------------------------------------------CATTGCACTTGTCCCGGCCTATG 	2
---------------------------------------------------ATTGCACTTGTCCCGGCCTAT 	1


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
14 Drosophila melanogaster GSM385748-16264 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAACGTTT 	121
------------AGGACGGGAAGGTGTCAAC 	180
------------AGGACGGGAAGGTGTCAACGTT 	1479
------------AGGACGGGAAGGTGTCAACG 	94
------------AGGACGGGAAGGTGTCAACGTTTT 	7
------------AGGACGGGAAGGTGTCAACGTTTTG 	1
------------AGGACGGGAAGGTGTCAACGTTTTGC 	2
------------AGGACGGGAAGGTGTCAACGT 	467
---------------ACGGGAAGGTGTCAACGTTT 	1
----------------CGGGAAGGTGTCAACGTTT 	1
----------------------------------TTGCATTTCGAATAAACATTGCAC 	1
----------------------------------------------TAAACATTGCACTTGTCCCGGCCTAT 	1
-----------------------------------------------AAACATTGCACTTGTCCCGGCCTAT 	1
------------------------------------------------AACATTGCACTTGTCCCGGCCTAT 	1
------------------------------------------------AACATTGCACTTGTCCCGGC 	1
-------------------------------------------------ACATTGCACTTGTCCCGGCCT 	2
-------------------------------------------------ACATTGCACTTGTCCCGGCCTA 	2
-------------------------------------------------ACATTGCACTTGTCCCGGCCTAT 	36
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	2172
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	43814
--------------------------------------------------CATTGCACTTGTCCCGGCC 	187
--------------------------------------------------CATTGCACTTGTCCCGGCCT 	1412
--------------------------------------------------CATTGCACTTGTCCCGGCCTATG 	22
---------------------------------------------------ATTGCACTTGTCCCGGCCTA 	80
---------------------------------------------------ATTGCACTTGTCCCGGCCT 	35
---------------------------------------------------ATTGCACTTGTCCCGGCCTAT 	1212
----------------------------------------------------TTGCACTTGTCCCGGCCTA 	1
----------------------------------------------------TTGCACTTGTCCCGGCCTAT 	21
-----------------------------------------------------TGCACTTGTCCCGGCCTAT 	34


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA



#specieslibrarymiRNAmiRNA*armmismatchesbulges
15 Drosophila melanogaster GSM399110-16285 CATTGCACTTGTCCCGGCCTAT AGGACGGGAAGGTGTCAACGTT down 2 2


Secondary structure

TGAATTTCCCGTAGGACGGGAAGGTGTCAACGTTTTGCATTTCGAATAAACATTGCACTTGTCCCGGCCTATGGGCGGTTT
------------AGGACGGGAAGGTGTCAAC 	1
------------AGGACGGGAAGGTGTCAACGT 	44
------------AGGACGGGAAGGTGTCAACGTTT 	19
------------AGGACGGGAAGGTGTCAACG 	79
------------AGGACGGGAAGGTGTCAACGTT 	1189
-------------GGACGGGAAGGTGTCAACGTT 	12
-------------GGACGGGAAGGTGTCAACGTTT 	2
-------------------------------------------------ACATTGCACTTGTCCCGGCCTAT 	8
--------------------------------------------------CATTGCACTTGTCCCGGCCT 	220
--------------------------------------------------CATTGCACTTGTCCCGGCCTA 	331
--------------------------------------------------CATTGCACTTGTCCCGGCCTAT 	2428
--------------------------------------------------CATTGCACTTGTCCCGGCC 	5
---------------------------------------------------ATTGCACTTGTCCCGGCCTAT 	19
---------------------------------------------------ATTGCACTTGTCCCGGCCTA 	1
----------------------------------------------------TTGCACTTGTCCCGGCCTAT 	2


Overlaps with: MNEST036379 MNEST036380
Overlaps with miRBase pre-miRNAs: dse-mir-92a dsi-mir-92a dme-mir-92a der-mir-92a
HuntMi prediction: true miRNA