miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: CGGTCTGTCGCAGAACACGGCA

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant CGGTCTGTCGCAGAACACGGCA CCGTGTTCTATGATAGACTCGGC down 1 1


Secondary structure

CCGGCGTCGGTGCCGTGTTCTATGATAGACTCGGCTGGCGCCTGCCGGTCTGTCGCAGAACACGGCACCGCATACG
---------------------------------------------CGGTCTGTCGCAGAACACGGCAC 	2
---------------------------------------------CGGTCTGTCGCAGAACACGGCA 	687
---------------------------------------------CGGTCTGTCGCAGAACACGGC 	46
---------------------------------------------CGGTCTGTCGCAGAACACGG 	13
---------------------------------------------CGGTCTGTCGCAGAACACG 	2
----------------------------------------------GGTCTGTCGCAGAACACGGCA 	9

Overlaps with: MNEST035108
Overlaps with miRBase pre-miRNAs: api-mir-3017a
HuntMi prediction: true miRNA