miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: CTAAGCACAGCTCTCGCATCC

selected species: Vitis vinifera



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Vitis vinifera GSM458929-2717 CTAAGCACAGCTCTCGCATCC ATGCGAGAGCCGTGCTTAGTA down 1 0


Secondary structure

GTTAAAGAGATAATGGAAAGGGATGCGAGAGCCGTGCTTAGTATGCCACCTACTAAGATTATTGAATATATAAAACTTCATCTGCTAAGCACAGCTCTCGCATCCCTTTCCATTATCTCTCATG
----------------AAAGGGATGCGAGAGCCGTGC 	1
------------------AGGGATGCGAGAGCCGTGCT 	1
------------------------------------------------------------------------------------CTAAGCACAGCTCTCGCATCC 	34
------------------------------------------------------------------------------------CTAAGCACAGCTCTCGCATC 	1
------------------------------------------------------------------------------------CTAAGCACAGCTCTCGCAT 	2
-----------------------------------------------------------------------------------------CACAGCTCTCGCATCCCTTTC 	1

Overlaps with: MNEST041705
Overlaps with miRBase pre-miRNAs: vvi-MIR3628
HuntMi prediction: true miRNA