miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions

Please select library, species and/or miRNA sequence.

selected mature miRNA sequence: CTGAAGTGTTTGGGGGAACTC

selected species: Vitis vinifera

48 records found

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
1	Vitis vinifera	GSM458927	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

GTGTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTAATTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCTA
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	102
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
2	Vitis vinifera	GSM458927	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

TTGAATACATAATCCATTAGGTGCCCCCTAGAGTTCCCCTGACCACTTCACTGGGGATCTTCTGTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCCTATCAACTAC
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	102
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3

Overlaps with: MNEST041654 MNEST054862
Overlaps with miRBase pre-miRNAs: vvi-MIR395i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
3	Vitis vinifera	GSM458927	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

TTGAATACATAATCCATTAGGTGCCCCCTAGAGTTCCCCTGACCACTTCACTGGGGGATCTTCTGTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCCTATCAACTAC
------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	102
------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3

Overlaps with: MNEST041657 MNEST054865
Overlaps with miRBase pre-miRNAs: vvi-MIR395l
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
4	Vitis vinifera	GSM458927	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

GTTAGATGTGGAGAAAACATGATCCATTAAGTGTACCCTAGAGTTCCCCTGACCACTTCACTGGGGATCTTCTCTAATGACTTCCCACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCCTATCAACTTCTTTACTATAT
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	102
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3

Overlaps with: MNEST041651 MNEST054859
Overlaps with miRBase pre-miRNAs: vvi-MIR395f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
5	Vitis vinifera	GSM458927	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCATTG	down	2	0

Secondary structure

TTGAATACATAATCCATTACGTGCCCCCTAGAGTTCCCCTGACCACTTCATTGGGGATCTTCTCTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCTATCAACCACA
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	102
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3

Overlaps with: MNEST041649 MNEST054857
Overlaps with miRBase pre-miRNAs: vvi-MIR395d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
6	Vitis vinifera	GSM458927	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

TGGATGCGTATTGAATACATAATCCATTAGGTGCCCCCTAGAGTTCCCCTGACCACTTCACTGGGGATCTTCTTTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCTATCAACCACAGGCATGATCA
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	102
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3

Overlaps with: MNEST008313
Overlaps with miRBase pre-miRNAs: vvi-MIR395j
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
7	Vitis vinifera	GSM458927	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGAGCACTTCATTG	down	1	0

Secondary structure

AAAAGATCAAGTGTCCCCTAGAGTTCCCCTGAGCACTTCATTGGGGATCCTTAGTTTTCAATTCCTACTGAAGTGTTTGGGGGAACTCCCGGTGTCATTTGATAACC
-------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	102
-------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3

Overlaps with: MNEST041652 MNEST054860
Overlaps with miRBase pre-miRNAs: vvi-MIR395g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
8	Vitis vinifera	GSM458927	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGATCACTTCACTA	down	2	0

Secondary structure

AACACATCGAGTGTCCCCTAGAGTTCCCTTGATCACTTCACTAGGGAGCTTCGCTAGTTTTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTACCGACGTTTCTCA
-------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	102
-------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3

Overlaps with: MNEST041646 MNEST054854
Overlaps with miRBase pre-miRNAs: vvi-MIR395a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
9	Vitis vinifera	GSM458927	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGAACACTTCACTG	down	1	0

Secondary structure

TTGGATAAAGAACACATCGAGTGTCCCCTAGAGTTCCCTTGAACACTTCACTGGGGACCTTCTCTAGTTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCATTTGATACTTACTGACTATC
-----------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	102
-----------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-----------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3

Overlaps with: MNEST041658 MNEST054866
Overlaps with miRBase pre-miRNAs: vvi-MIR395m
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
10	Vitis vinifera	GSM458927	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

TGCCAAGCAGGCACAAGTAGTTGGATAAAGAACACATCGAGTGTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTAGTTATAATGTCTCCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCATTTGATACTTACTGACTATCCATCACGCCTTAGTTACATC
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	102
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3

HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
11	Vitis vinifera	GSM458927	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

GTCTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTAATTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCA
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	102
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
12	Vitis vinifera	GSM458927	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

AGTGTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTAGTTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCAT
----------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	102
----------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
----------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3

Overlaps with: MNEST041648 MNEST054856
Overlaps with miRBase pre-miRNAs: vvi-MIR395c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
13	Vitis vinifera	GSM458930-2718	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

TTGAATACATAATCCATTAGGTGCCCCCTAGAGTTCCCCTGACCACTTCACTGGGGGATCTTCTGTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCCTATCAACTAC
------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	26
------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	1
-------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041657 MNEST054865
Overlaps with miRBase pre-miRNAs: vvi-MIR395l
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
14	Vitis vinifera	GSM458930-2718	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

GTTAGATGTGGAGAAAACATGATCCATTAAGTGTACCCTAGAGTTCCCCTGACCACTTCACTGGGGATCTTCTCTAATGACTTCCCACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCCTATCAACTTCTTTACTATAT
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	26
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	1
----------------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041651 MNEST054859
Overlaps with miRBase pre-miRNAs: vvi-MIR395f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
15	Vitis vinifera	GSM458930-2718	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCATTG	down	2	0

Secondary structure

TTGAATACATAATCCATTACGTGCCCCCTAGAGTTCCCCTGACCACTTCATTGGGGATCTTCTCTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCTATCAACCACA
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	26
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	1
------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041649 MNEST054857
Overlaps with miRBase pre-miRNAs: vvi-MIR395d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
16	Vitis vinifera	GSM458930-2718	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

TGGATGCGTATTGAATACATAATCCATTAGGTGCCCCCTAGAGTTCCCCTGACCACTTCACTGGGGATCTTCTTTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCTATCAACCACAGGCATGATCA
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	26
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	1
----------------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST008313
Overlaps with miRBase pre-miRNAs: vvi-MIR395j
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
17	Vitis vinifera	GSM458930-2718	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGAGCACTTCATTG	down	1	0

Secondary structure

AAAAGATCAAGTGTCCCCTAGAGTTCCCCTGAGCACTTCATTGGGGATCCTTAGTTTTCAATTCCTACTGAAGTGTTTGGGGGAACTCCCGGTGTCATTTGATAACC
-------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	26
-------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	1
--------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041652 MNEST054860
Overlaps with miRBase pre-miRNAs: vvi-MIR395g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
18	Vitis vinifera	GSM458930-2718	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGATCACTTCACTA	down	2	0

Secondary structure

AACACATCGAGTGTCCCCTAGAGTTCCCTTGATCACTTCACTAGGGAGCTTCGCTAGTTTTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTACCGACGTTTCTCA
-------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	26
-------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	1
--------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041646 MNEST054854
Overlaps with miRBase pre-miRNAs: vvi-MIR395a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
19	Vitis vinifera	GSM458930-2718	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGAACACTTCACTG	down	1	0

Secondary structure

TTGGATAAAGAACACATCGAGTGTCCCCTAGAGTTCCCTTGAACACTTCACTGGGGACCTTCTCTAGTTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCATTTGATACTTACTGACTATC
-----------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	26
-----------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-----------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	1
------------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041658 MNEST054866
Overlaps with miRBase pre-miRNAs: vvi-MIR395m
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
20	Vitis vinifera	GSM458930-2718	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

TGCCAAGCAGGCACAAGTAGTTGGATAAAGAACACATCGAGTGTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTAGTTATAATGTCTCCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCATTTGATACTTACTGACTATCCATCACGCCTTAGTTACATC
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	26
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	1

HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
21	Vitis vinifera	GSM458930-2718	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

GTCTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTAATTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCA
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	26
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	1
----------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	1

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
22	Vitis vinifera	GSM458930-2718	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

GTGTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTAATTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCTA
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	26
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	1
----------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	1

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
23	Vitis vinifera	GSM458930-2718	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

TTGAATACATAATCCATTAGGTGCCCCCTAGAGTTCCCCTGACCACTTCACTGGGGATCTTCTGTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCCTATCAACTAC
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	26
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	1
------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041654 MNEST054862
Overlaps with miRBase pre-miRNAs: vvi-MIR395i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
24	Vitis vinifera	GSM458930-2718	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

AGTGTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTAGTTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCAT
----------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	26
----------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
----------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	1
-----------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041648 MNEST054856
Overlaps with miRBase pre-miRNAs: vvi-MIR395c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
25	Vitis vinifera	GSM458929-2717	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

GTGTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTAATTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCTA
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	10
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3
-----------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	1

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
26	Vitis vinifera	GSM458929-2717	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

TTGAATACATAATCCATTAGGTGCCCCCTAGAGTTCCCCTGACCACTTCACTGGGGATCTTCTGTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCCTATCAACTAC
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	10
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3
-------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041654 MNEST054862
Overlaps with miRBase pre-miRNAs: vvi-MIR395i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
27	Vitis vinifera	GSM458929-2717	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

TTGAATACATAATCCATTAGGTGCCCCCTAGAGTTCCCCTGACCACTTCACTGGGGGATCTTCTGTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCCTATCAACTAC
------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	10
------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3
--------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041657 MNEST054865
Overlaps with miRBase pre-miRNAs: vvi-MIR395l
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
28	Vitis vinifera	GSM458929-2717	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

GTTAGATGTGGAGAAAACATGATCCATTAAGTGTACCCTAGAGTTCCCCTGACCACTTCACTGGGGATCTTCTCTAATGACTTCCCACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCCTATCAACTTCTTTACTATAT
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	10
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3
-----------------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041651 MNEST054859
Overlaps with miRBase pre-miRNAs: vvi-MIR395f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
29	Vitis vinifera	GSM458929-2717	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCATTG	down	2	0

Secondary structure

TTGAATACATAATCCATTACGTGCCCCCTAGAGTTCCCCTGACCACTTCATTGGGGATCTTCTCTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCTATCAACCACA
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	10
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3
-------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041649 MNEST054857
Overlaps with miRBase pre-miRNAs: vvi-MIR395d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
30	Vitis vinifera	GSM458929-2717	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

TGGATGCGTATTGAATACATAATCCATTAGGTGCCCCCTAGAGTTCCCCTGACCACTTCACTGGGGATCTTCTTTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCTATCAACCACAGGCATGATCA
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	10
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3
-----------------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST008313
Overlaps with miRBase pre-miRNAs: vvi-MIR395j
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
31	Vitis vinifera	GSM458929-2717	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGAGCACTTCATTG	down	1	0

Secondary structure

AAAAGATCAAGTGTCCCCTAGAGTTCCCCTGAGCACTTCATTGGGGATCCTTAGTTTTCAATTCCTACTGAAGTGTTTGGGGGAACTCCCGGTGTCATTTGATAACC
-------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	10
-------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3
---------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041652 MNEST054860
Overlaps with miRBase pre-miRNAs: vvi-MIR395g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
32	Vitis vinifera	GSM458929-2717	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGATCACTTCACTA	down	2	0

Secondary structure

AACACATCGAGTGTCCCCTAGAGTTCCCTTGATCACTTCACTAGGGAGCTTCGCTAGTTTTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTACCGACGTTTCTCA
-------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	10
-------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3
---------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041646 MNEST054854
Overlaps with miRBase pre-miRNAs: vvi-MIR395a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
33	Vitis vinifera	GSM458929-2717	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGAACACTTCACTG	down	1	0

Secondary structure

TTGGATAAAGAACACATCGAGTGTCCCCTAGAGTTCCCTTGAACACTTCACTGGGGACCTTCTCTAGTTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCATTTGATACTTACTGACTATC
-----------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	10
-----------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
-----------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3
-------------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041658 MNEST054866
Overlaps with miRBase pre-miRNAs: vvi-MIR395m
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
34	Vitis vinifera	GSM458929-2717	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

TGCCAAGCAGGCACAAGTAGTTGGATAAAGAACACATCGAGTGTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTAGTTATAATGTCTCCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCATTTGATACTTACTGACTATCCATCACGCCTTAGTTACATC
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	10
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	1

HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
35	Vitis vinifera	GSM458929-2717	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

GTCTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTAATTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCA
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	10
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3
-----------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	1

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
36	Vitis vinifera	GSM458929-2717	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

AGTGTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTAGTTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCAT
----------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	10
----------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	1
----------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	3
------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	1

Overlaps with: MNEST041648 MNEST054856
Overlaps with miRBase pre-miRNAs: vvi-MIR395c
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
37	Vitis vinifera	GSM458928-2716	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGAACACTTCACTG	down	1	0

Secondary structure

TTGGATAAAGAACACATCGAGTGTCCCCTAGAGTTCCCTTGAACACTTCACTGGGGACCTTCTCTAGTTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCATTTGATACTTACTGACTATC
-----------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTCC 	5
-----------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	1420
-----------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	30
-----------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	57
------------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	19
------------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACT 	1
-------------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	2

Overlaps with: MNEST041658 MNEST054866
Overlaps with miRBase pre-miRNAs: vvi-MIR395m
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
38	Vitis vinifera	GSM458928-2716	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

TGCCAAGCAGGCACAAGTAGTTGGATAAAGAACACATCGAGTGTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTAGTTATAATGTCTCCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCATTTGATACTTACTGACTATCCATCACGCCTTAGTTACATC
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTCC 	5
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	1420
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	30
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	57
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	19
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACT 	1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	2

HuntMi prediction: not a miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
39	Vitis vinifera	GSM458928-2716	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

GTCTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTAATTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCA
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACTCC 	5
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	1420
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	30
---------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	57
----------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	19
----------------------------------------------------------------TGAAGTGTTTGGGGGAACT 	1
-----------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	2

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
40	Vitis vinifera	GSM458928-2716	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

GTGTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTAATTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCTA
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACTCC 	5
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	1420
---------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	30
---------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	57
----------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	19
----------------------------------------------------------------TGAAGTGTTTGGGGGAACT 	1
-----------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	2

HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
41	Vitis vinifera	GSM458928-2716	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

TTGAATACATAATCCATTAGGTGCCCCCTAGAGTTCCCCTGACCACTTCACTGGGGATCTTCTGTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCCTATCAACTAC
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTCC 	5
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	1420
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	30
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	57
------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	19
------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACT 	1
-------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	2

Overlaps with: MNEST041654 MNEST054862
Overlaps with miRBase pre-miRNAs: vvi-MIR395i
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
42	Vitis vinifera	GSM458928-2716	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

TTGAATACATAATCCATTAGGTGCCCCCTAGAGTTCCCCTGACCACTTCACTGGGGGATCTTCTGTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCCTATCAACTAC
------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTCC 	5
------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	1420
------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	30
------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	57
-------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	19
-------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACT 	1
--------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	2

Overlaps with: MNEST041657 MNEST054865
Overlaps with miRBase pre-miRNAs: vvi-MIR395l
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
43	Vitis vinifera	GSM458928-2716	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

GTTAGATGTGGAGAAAACATGATCCATTAAGTGTACCCTAGAGTTCCCCTGACCACTTCACTGGGGATCTTCTCTAATGACTTCCCACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCCTATCAACTTCTTTACTATAT
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTCC 	5
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	1420
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	30
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	57
----------------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	19
----------------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACT 	1
-----------------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	2

Overlaps with: MNEST041651 MNEST054859
Overlaps with miRBase pre-miRNAs: vvi-MIR395f
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
44	Vitis vinifera	GSM458928-2716	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCATTG	down	2	0

Secondary structure

TTGAATACATAATCCATTACGTGCCCCCTAGAGTTCCCCTGACCACTTCATTGGGGATCTTCTCTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCTATCAACCACA
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTCC 	5
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	1420
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	30
-----------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	57
------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	19
------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACT 	1
-------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	2

Overlaps with: MNEST041649 MNEST054857
Overlaps with miRBase pre-miRNAs: vvi-MIR395d
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
45	Vitis vinifera	GSM458928-2716	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGACCACTTCACTG	down	2	0

Secondary structure

TGGATGCGTATTGAATACATAATCCATTAGGTGCCCCCTAGAGTTCCCCTGACCACTTCACTGGGGATCTTCTTTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGTCATTTAATACCTATCAACCACAGGCATGATCA
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTCC 	5
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	1420
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	30
---------------------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	57
----------------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	19
----------------------------------------------------------------------------------------TGAAGTGTTTGGGGGAACT 	1
-----------------------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	2

Overlaps with: MNEST008313
Overlaps with miRBase pre-miRNAs: vvi-MIR395j
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
46	Vitis vinifera	GSM458928-2716	CTGAAGTGTTTGGGGGAACTC	GTTCCCCTGAGCACTTCATTG	down	1	0

Secondary structure

AAAAGATCAAGTGTCCCCTAGAGTTCCCCTGAGCACTTCATTGGGGATCCTTAGTTTTCAATTCCTACTGAAGTGTTTGGGGGAACTCCCGGTGTCATTTGATAACC
-------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTCC 	5
-------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	1420
-------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	30
-------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	57
--------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	19
--------------------------------------------------------------------TGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	2

Overlaps with: MNEST041652 MNEST054860
Overlaps with miRBase pre-miRNAs: vvi-MIR395g
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
47	Vitis vinifera	GSM458928-2716	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGATCACTTCACTA	down	2	0

Secondary structure

AACACATCGAGTGTCCCCTAGAGTTCCCTTGATCACTTCACTAGGGAGCTTCGCTAGTTTTAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTACCGACGTTTCTCA
-------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTCC 	5
-------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	1420
-------------------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	30
-------------------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	57
--------------------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	19
--------------------------------------------------------------------------TGAAGTGTTTGGGGGAACT 	1
---------------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	2

Overlaps with: MNEST041646 MNEST054854
Overlaps with miRBase pre-miRNAs: vvi-MIR395a
HuntMi prediction: true miRNA

#	species	library	miRNA	miRNA*	arm	mismatches	bulges
48	Vitis vinifera	GSM458928-2716	CTGAAGTGTTTGGGGGAACTC	GTTCCCTTGACCACTTCACTG	down	2	0

Secondary structure

AGTGTCCCCTAGAGTTCCCTTGACCACTTCACTGGGGACCTTCTCTAGTTATAATGACTTCCTACTGAAGTGTTTGGGGGAACTCCTGGTGCCAT
----------------------------------------------------------------CTGAAGTGTTTGGGGGAACTCC 	5
----------------------------------------------------------------CTGAAGTGTTTGGGGGAACTC 	1420
----------------------------------------------------------------CTGAAGTGTTTGGGGGAACT 	30
----------------------------------------------------------------CTGAAGTGTTTGGGGGAAC 	57
-----------------------------------------------------------------TGAAGTGTTTGGGGGAACTC 	19
-----------------------------------------------------------------TGAAGTGTTTGGGGGAACT 	1
------------------------------------------------------------------GAAGTGTTTGGGGGAACTC 	2

Overlaps with: MNEST041648 MNEST054856
Overlaps with miRBase pre-miRNAs: vvi-MIR395c
HuntMi prediction: true miRNA