miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: CTGCTGGGTCGGGGCATTAACA

selected species: Drosophila melanogaster



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM286607-9796 CTGCTGGGTCGGGGCATTAACA ATATTGTCCTGTCACAGCAGTA down 5 0


Secondary structure

TGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCA
----------------------ATATTGTCCTGTCACAGCAGTA 	215
----------------------ATATTGTCCTGTCACAGCAGT 	8
----------------------ATATTGTCCTGTCACAGCAG 	2
-----------------------TATTGTCCTGTCACAGCAGTA 	1
-------------------------------------------------------------------CTGCTGGGTCGGGGCATTAAC 	30
-------------------------------------------------------------------CTGCTGGGTCGGGGCATTAACA 	269
-------------------------------------------------------------------CTGCTGGGTCGGGGCATTAA 	11

Overlaps with: MNEST036577 MNEST036578
Overlaps with miRBase pre-miRNAs: dme-mir-1000
HuntMi prediction: true miRNA