miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: CTTGGCACTGGGAGAATTCAC

selected species: Drosophila melanogaster



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Drosophila melanogaster GSM286604-9792 CTTGGCACTGGGAGAATTCAC GGTTCTGCGGGTGCCAAAAC up 4 1


Secondary structure

TTCAATTTGCTGACTTTGAGTCTTGGCACTGGGAGAATTCACAGTTGACTTTATTATTCTGTGGTTCTGCGGGTGCCAAAACTTAAAAACCGGCTTTGTA
---------------------CTTGGCACTGGGAGAATTCA 	49
---------------------CTTGGCACTGGGAGAATTCAC 	110
---------------------CTTGGCACTGGGAGAATTCACAG 	7
---------------------CTTGGCACTGGGAGAATTCACA 	47
------------------------------------------------------------GTGGTTCTGCGGGTGCCAAAAC 	1

Overlaps with: MNEST036407 MNEST036408
Overlaps with miRBase pre-miRNAs: dme-mir-263b
HuntMi prediction: true miRNA