miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: CTTTCAGTCGGATGTTTGCAGC

selected species: Gallus gallus



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Gallus gallus GSM388803 CTTTCAGTCGGATGTTTGCAGC TGTAAACATCCTCGACTGGAAGCT down 1 2


Secondary structure

ATTGCTGTTGACAGTGAGCGACTGTAAACATCCTCGACTGGAAGCTGTGAAGCAGCAGATGGGGCTTTCAGTCGGATGTTTGCAGCTGCCAACTGCCACAGACGT
----------------------TGTAAACATCCTCGACTGGAAGCT 	95
----------------------TGTAAACATCCTCGACTGGAAGC 	176
----------------------TGTAAACATCCTCGACTGGAAG 	65
----------------------TGTAAACATCCTCGACTGGAA 	30
----------------------------------------------------------------CTTTCAGTCGGATGTTTGCAGC 	14276
----------------------------------------------------------------CTTTCAGTCGGATGTTTGCAG 	1172
----------------------------------------------------------------CTTTCAGTCGGATGTTTGCA 	264
-----------------------------------------------------------------TTTCAGTCGGATGTTTGCAGCT 	11
-----------------------------------------------------------------TTTCAGTCGGATGTTTGCAGC 	3044
-----------------------------------------------------------------TTTCAGTCGGATGTTTGCAG 	255
-----------------------------------------------------------------TTTCAGTCGGATGTTTGCA 	2

Overlaps with: MNEST025915 MNEST025916
Overlaps with miRBase pre-miRNAs: gga-mir-30a tgu-mir-30b
HuntMi prediction: true miRNA